RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 A0A0U1RQG5 324 aaPredicted RBP12.76□□□□□ -0.37
CHRNA1-202ENST00000348749 ZSCAN23Q3MJ62 389 aa12.76□□□□□ -0.37
CHRNA1-202ENST00000348749 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
CHRNA1-202ENST00000348749 SMC4Q9NTJ3 1288 aa12.76□□□□□ -0.37
CHRNA1-202ENST00000348749 POGZQ7Z3K3 1410 aa12.76□□□□□ -0.37
CHRNA1-202ENST00000348749 ATAD2Q6PL18 1390 aa12.76□□□□□ -0.37
CHRNA1-202ENST00000348749 BMP2KLQ5H9B9 411 aa12.76□□□□□ -0.37
CHRNA1-202ENST00000348749 RBSNQ9H1K0 784 aa12.76□□□□□ -0.37
CHRNA1-202ENST00000348749 CCDC39Q9UFE4 941 aa12.76□□□□□ -0.37
CHRNA1-202ENST00000348749 ASXL2Q76L83 1435 aa12.75□□□□□ -0.37
CHRNA1-202ENST00000348749 CD2BP2O95400 341 aaKnown RBP12.75□□□□□ -0.37
CHRNA1-202ENST00000348749 TRIM27P14373 513 aa12.75□□□□□ -0.37
CHRNA1-202ENST00000348749 TMPOP42166 694 aaKnown RBP12.75□□□□□ -0.37
CHRNA1-202ENST00000348749 NUCB1Q02818 461 aa12.75□□□□□ -0.37
CHRNA1-202ENST00000348749 PPIP5K1Q6PFW1 1433 aa12.75□□□□□ -0.37
CHRNA1-202ENST00000348749 CD109Q6YHK3 1445 aa12.75□□□□□ -0.37
CHRNA1-202ENST00000348749 ZSCAN20P17040 1043 aaPredicted RBP12.74□□□□□ -0.37
CHRNA1-202ENST00000348749 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
CHRNA1-202ENST00000348749 TNNT2P45379 298 aaPredicted RBP12.74□□□□□ -0.37
CHRNA1-202ENST00000348749 GAS2L2Q8NHY3 880 aa12.74□□□□□ -0.37
CHRNA1-202ENST00000348749 ZBTB40Q9NUA8 1239 aa12.74□□□□□ -0.37
CHRNA1-202ENST00000348749 PNPLA6Q8IY17 1366 aa12.73□□□□□ -0.37
CHRNA1-202ENST00000348749 CYP2E1P05181 493 aaPredicted RBP12.73□□□□□ -0.37
CHRNA1-202ENST00000348749 NUCB2P80303 420 aa12.73□□□□□ -0.37
CHRNA1-202ENST00000348749 EXOSC9Q06265 439 aaKnown RBP12.73□□□□□ -0.37
CHRNA1-202ENST00000348749 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
CHRNA1-202ENST00000348749 GTPBP4Q9BZE4 634 aaKnown RBP12.73□□□□□ -0.37
CHRNA1-202ENST00000348749 LMBRD1Q9NUN5 540 aa12.73□□□□□ -0.37
CHRNA1-202ENST00000348749 CHGAP10645 457 aaKnown RBP12.72□□□□□ -0.37
CHRNA1-202ENST00000348749 CAVIN1Q6NZI2 390 aaKnown RBP12.72□□□□□ -0.37
CHRNA1-202ENST00000348749 SSH1Q8WYL5 1049 aa12.72□□□□□ -0.37
CHRNA1-202ENST00000348749 ZHX1Q9UKY1 873 aaPredicted RBP12.72□□□□□ -0.37
CHRNA1-202ENST00000348749 TRIM35Q9UPQ4 493 aa12.72□□□□□ -0.37
CHRNA1-202ENST00000348749 MYRIPQ8NFW9 859 aa12.72□□□□□ -0.37
CHRNA1-202ENST00000348749 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
CHRNA1-202ENST00000348749 FOXD4L1Q9NU39 408 aa12.72□□□□□ -0.37
CHRNA1-202ENST00000348749 TERF2IPQ9NYB0 399 aa12.72□□□□□ -0.37
CHRNA1-202ENST00000348749 A0A1W2PP64 1363 aa12.71□□□□□ -0.37
CHRNA1-202ENST00000348749 KIF20AO95235 890 aa12.71□□□□□ -0.37
CHRNA1-202ENST00000348749 PRIM1P49642 420 aaKnown RBP12.71□□□□□ -0.37
CHRNA1-202ENST00000348749 ITPRIPQ8IWB1 547 aa12.71□□□□□ -0.37
CHRNA1-202ENST00000348749 PRDM10Q9NQV6 1147 aa12.71□□□□□ -0.37
CHRNA1-202ENST00000348749 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
CHRNA1-202ENST00000348749 SIGLEC1Q9BZZ2 1709 aa12.71□□□□□ -0.38
CHRNA1-202ENST00000348749 KIF20BQ96Q89 1820 aa12.71□□□□□ -0.38
CHRNA1-202ENST00000348749 MCTP1Q6DN14 999 aa12.7□□□□□ -0.38
CHRNA1-202ENST00000348749 CHD1LQ86WJ1 897 aa12.7□□□□□ -0.38
CHRNA1-202ENST00000348749 ARHGAP45Q92619 1136 aa12.7□□□□□ -0.38
CHRNA1-202ENST00000348749 CFAP65Q6ZU64 1925 aaKnown RBP12.7□□□□□ -0.38
CHRNA1-202ENST00000348749 GTF2F1P35269 517 aaKnown RBP eCLIP12.7□□□□□ -0.38
CHRNA1-202ENST00000348749 TMEM132EQ6IEE7 984 aa12.7□□□□□ -0.38
CHRNA1-202ENST00000348749 LRSAM1Q6UWE0 723 aa12.7□□□□□ -0.38
CHRNA1-202ENST00000348749 GCC1Q96CN9 775 aa12.7□□□□□ -0.38
CHRNA1-202ENST00000348749 AK9Q5TCS8 1911 aa12.7□□□□□ -0.38
CHRNA1-202ENST00000348749 TSR2Q969E8 191 aaKnown RBP12.69□□□□□ -0.38
CHRNA1-202ENST00000348749 PRIMPOLQ96LW4 560 aa12.69□□□□□ -0.38
CHRNA1-202ENST00000348749 NOB1Q9ULX3 412 aaKnown RBP12.69□□□□□ -0.38
CHRNA1-202ENST00000348749 FCHSD2O94868 740 aa12.69□□□□□ -0.38
CHRNA1-202ENST00000348749 TMEM57Q8N5G2 664 aa12.69□□□□□ -0.38
CHRNA1-202ENST00000348749 LETM1O95202 739 aaPredicted RBP12.68□□□□□ -0.38
CHRNA1-202ENST00000348749 KIAA2012Q0VF49 1180 aa12.68□□□□□ -0.38
CHRNA1-202ENST00000348749 LNPKQ9C0E8 428 aa12.68□□□□□ -0.38
CHRNA1-202ENST00000348749 CWC22Q9HCG8 908 aaKnown RBP12.68□□□□□ -0.38
CHRNA1-202ENST00000348749 SLC52A1Q9NWF4 448 aa12.68□□□□□ -0.38
CHRNA1-202ENST00000348749 PTCH1Q13635 1447 aa12.68□□□□□ -0.38
CHRNA1-202ENST00000348749 PTPRMP28827 1452 aa12.68□□□□□ -0.38
CHRNA1-202ENST00000348749 NEO1Q92859 1461 aa12.67□□□□□ -0.38
CHRNA1-202ENST00000348749 DIAPH1O60610 1272 aaKnown RBP12.67□□□□□ -0.38
CHRNA1-202ENST00000348749 HMGN5P82970 282 aaKnown RBP12.67□□□□□ -0.38
CHRNA1-202ENST00000348749 RABEP1Q15276 862 aa12.67□□□□□ -0.38
CHRNA1-202ENST00000348749 TBC1D9Q6ZT07 1266 aa12.67□□□□□ -0.38
CHRNA1-202ENST00000348749 CD163L1Q9NR16 1453 aa12.67□□□□□ -0.38
CHRNA1-202ENST00000348749 YEATS2Q9ULM3 1422 aa12.67□□□□□ -0.38
CHRNA1-202ENST00000348749 KIF24Q5T7B8 1368 aa12.67□□□□□ -0.38
CHRNA1-202ENST00000348749 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
CHRNA1-202ENST00000348749 RBM42Q9BTD8 480 aaKnown RBP12.67□□□□□ -0.38
CHRNA1-202ENST00000348749 FAM135BQ49AJ0 1406 aa12.66□□□□□ -0.38
CHRNA1-202ENST00000348749 GPT2Q8TD30 523 aa12.66□□□□□ -0.38
CHRNA1-202ENST00000348749 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
CHRNA1-202ENST00000348749 FYB1O15117 783 aa12.65□□□□□ -0.38
CHRNA1-202ENST00000348749 HDGFL2Q7Z4V5 671 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-202ENST00000348749 ZNF710Q8N1W2 664 aa12.65□□□□□ -0.38
CHRNA1-202ENST00000348749 ARID3AQ99856 593 aa12.65□□□□□ -0.38
CHRNA1-202ENST00000348749 LRRC7Q96NW7 1537 aa12.64□□□□□ -0.39
CHRNA1-202ENST00000348749 PPP4R3BQ5MIZ7 849 aa12.64□□□□□ -0.39
CHRNA1-202ENST00000348749 TMEM131LA2VDJ0 1609 aa12.64□□□□□ -0.39
CHRNA1-202ENST00000348749 ATP7BP35670 1465 aa12.63□□□□□ -0.39
CHRNA1-202ENST00000348749 CDC45O75419 566 aa12.63□□□□□ -0.39
CHRNA1-202ENST00000348749 GGT6Q6P531 493 aa12.63□□□□□ -0.39
CHRNA1-202ENST00000348749 TMEM63CQ9P1W3 806 aa12.63□□□□□ -0.39
CHRNA1-202ENST00000348749 KIF13AQ9H1H9 1805 aa12.63□□□□□ -0.39
CHRNA1-202ENST00000348749 DIP2CQ9Y2E4 1556 aa12.63□□□□□ -0.39
CHRNA1-202ENST00000348749 DLC1Q96QB1 1528 aa12.63□□□□□ -0.39
CHRNA1-202ENST00000348749 PRPF40AO75400 957 aaKnown RBP12.63□□□□□ -0.39
CHRNA1-202ENST00000348749 MBD3O95983 291 aa12.63□□□□□ -0.39
CHRNA1-202ENST00000348749 SRPK2P78362 688 aaKnown RBP12.63□□□□□ -0.39
CHRNA1-202ENST00000348749 RBM27Q9P2N5 1060 aaKnown RBP12.63□□□□□ -0.39
CHRNA1-202ENST00000348749 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.63□□□□□ -0.39
CHRNA1-202ENST00000348749 KDM4FA0A1W2PPD8 638 aa12.62□□□□□ -0.39
CHRNA1-202ENST00000348749 ZBTB7BO15156 539 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms