RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 RRP7AQ9Y3A4 280 aaKnown RBP24.5■■□□□ 1.51
PTN-201ENST00000348225 RGPD1P0DJD0 1748 aa24.5■■□□□ 1.51
PTN-201ENST00000348225 PRKAR2BP31323 418 aa24.5■■□□□ 1.51
PTN-201ENST00000348225 E9PSI1 815 aa24.49■■□□□ 1.51
PTN-201ENST00000348225 SLFN5Q08AF3 891 aa24.49■■□□□ 1.51
PTN-201ENST00000348225 HMOX1P09601 288 aa24.48■■□□□ 1.51
PTN-201ENST00000348225 TMPOP42166 694 aaKnown RBP24.48■■□□□ 1.51
PTN-201ENST00000348225 LMOD2Q6P5Q4 547 aa24.48■■□□□ 1.51
PTN-201ENST00000348225 PHRF1Q9P1Y6 1649 aaKnown RBP24.48■■□□□ 1.51
PTN-201ENST00000348225 FKBP8Q14318 412 aa24.47■■□□□ 1.51
PTN-201ENST00000348225 WDR63Q8IWG1 891 aa24.47■■□□□ 1.51
PTN-201ENST00000348225 USP19O94966 1318 aa24.47■■□□□ 1.51
PTN-201ENST00000348225 ARHGEF10O15013 1369 aa24.47■■□□□ 1.51
PTN-201ENST00000348225 HOXC9P31274 260 aa24.46■■□□□ 1.51
PTN-201ENST00000348225 SLAIN2Q9P270 581 aa24.46■■□□□ 1.51
PTN-201ENST00000348225 PXDNQ92626 1479 aa24.46■■□□□ 1.51
PTN-201ENST00000348225 DUSP27Q5VZP5 1158 aa24.46■■□□□ 1.51
PTN-201ENST00000348225 BRINP3Q76B58 766 aa24.46■■□□□ 1.51
PTN-201ENST00000348225 TNS3Q68CZ2 1445 aa24.45■■□□□ 1.5
PTN-201ENST00000348225 TRMT2AQ8IZ69 625 aaKnown RBP24.44■■□□□ 1.5
PTN-201ENST00000348225 RCAN3Q9UKA8 241 aa24.44■■□□□ 1.5
PTN-201ENST00000348225 GCP02774 474 aa24.43■■□□□ 1.5
PTN-201ENST00000348225 SULT6B1Q6IMI4 303 aa24.42■■□□□ 1.5
PTN-201ENST00000348225 DDX17Q92841 729 aaKnown RBP24.42■■□□□ 1.5
PTN-201ENST00000348225 RNF123Q5XPI4 1314 aa24.42■■□□□ 1.5
PTN-201ENST00000348225 RIPK4P57078 832 aa24.41■■□□□ 1.5
PTN-201ENST00000348225 IP6K1Q92551 441 aa24.41■■□□□ 1.5
PTN-201ENST00000348225 NFE2L2Q16236 605 aa24.4■■□□□ 1.5
PTN-201ENST00000348225 IGSF1Q8N6C5 1336 aa24.39■■□□□ 1.49
PTN-201ENST00000348225 SPINK5Q9NQ38 1064 aaPredicted RBP24.39■■□□□ 1.49
PTN-201ENST00000348225 MED1Q15648 1581 aaPredicted RBP24.38■■□□□ 1.49
PTN-201ENST00000348225 SPATA31A3Q5VYP0 1347 aa24.38■■□□□ 1.49
PTN-201ENST00000348225 LTBP4Q8N2S1 1624 aa24.38■■□□□ 1.49
PTN-201ENST00000348225 PHACTR3Q96KR7 559 aa24.38■■□□□ 1.49
PTN-201ENST00000348225 TRIM35Q9UPQ4 493 aa24.38■■□□□ 1.49
PTN-201ENST00000348225 ARHGEF25Q86VW2 580 aa24.37■■□□□ 1.49
PTN-201ENST00000348225 AEBP1Q8IUX7 1158 aa24.37■■□□□ 1.49
PTN-201ENST00000348225 KDRP35968 1356 aa24.37■■□□□ 1.49
PTN-201ENST00000348225 ERICH6BQ5W0A0 696 aa24.36■■□□□ 1.49
PTN-201ENST00000348225 MYH16Q9H6N6 1097 aa24.36■■□□□ 1.49
PTN-201ENST00000348225 IL16Q14005 1332 aa24.36■■□□□ 1.49
PTN-201ENST00000348225 LMOD3Q0VAK6 560 aa24.35■■□□□ 1.49
PTN-201ENST00000348225 EYA1Q99502 592 aa24.35■■□□□ 1.49
PTN-201ENST00000348225 NHSL1Q5SYE7 1610 aa24.35■■□□□ 1.49
PTN-201ENST00000348225 SOS2Q07890 1332 aaPredicted RBP24.35■■□□□ 1.49
PTN-201ENST00000348225 ZBTB7CA1YPR0 619 aa24.35■■□□□ 1.49
PTN-201ENST00000348225 CRYBG1Q9Y4K1 1723 aa24.33■■□□□ 1.49
PTN-201ENST00000348225 DLG5Q8TDM6 1919 aa24.33■■□□□ 1.48
PTN-201ENST00000348225 PLEKHG5O94827 1062 aa24.32■■□□□ 1.48
PTN-201ENST00000348225 RRP1P56182 461 aaKnown RBP24.32■■□□□ 1.48
PTN-201ENST00000348225 CALD1Q05682 793 aaKnown RBP24.32■■□□□ 1.48
PTN-201ENST00000348225 IRX6P78412 446 aaPredicted RBP24.32■■□□□ 1.48
PTN-201ENST00000348225 LTV1Q96GA3 475 aaPredicted RBP24.32■■□□□ 1.48
PTN-201ENST00000348225 ABCC6O95255 1503 aa24.3■■□□□ 1.48
PTN-201ENST00000348225 ZC3H6P61129 1189 aaKnown RBP24.26■■□□□ 1.47
PTN-201ENST00000348225 GAS2L2Q8NHY3 880 aa24.24■■□□□ 1.47
PTN-201ENST00000348225 FANCIQ9NVI1 1328 aa24.24■■□□□ 1.47
PTN-201ENST00000348225 ROBO1Q9Y6N7 1651 aa24.24■■□□□ 1.47
PTN-201ENST00000348225 CPDO75976 1380 aa24.24■■□□□ 1.47
PTN-201ENST00000348225 ANKRD24Q8TF21 1146 aa24.24■■□□□ 1.47
PTN-201ENST00000348225 CAMTA1Q9Y6Y1 1673 aa24.23■■□□□ 1.47
PTN-201ENST00000348225 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.23■■□□□ 1.47
PTN-201ENST00000348225 CABLES1Q8TDN4 633 aa24.23■■□□□ 1.47
PTN-201ENST00000348225 RGPD5Q99666 1765 aa24.22■■□□□ 1.47
PTN-201ENST00000348225 CT47B1P0C2W7 299 aaPredicted RBP24.22■■□□□ 1.47
PTN-201ENST00000348225 RGPD2P0DJD1 1756 aa24.22■■□□□ 1.47
PTN-201ENST00000348225 COL18A1P39060 1754 aa24.22■■□□□ 1.47
PTN-201ENST00000348225 ABCA3Q99758 1704 aa24.21■■□□□ 1.47
PTN-201ENST00000348225 AHDC1Q5TGY3 1603 aaPredicted RBP24.21■■□□□ 1.47
PTN-201ENST00000348225 NCAPD2Q15021 1401 aa24.21■■□□□ 1.47
PTN-201ENST00000348225 GNAI1P63096 354 aa24.21■■□□□ 1.47
PTN-201ENST00000348225 NBPF6Q5VWK0 638 aa24.21■■□□□ 1.47
PTN-201ENST00000348225 NBPF4Q96M43 638 aa24.21■■□□□ 1.47
PTN-201ENST00000348225 IFT57Q9NWB7 429 aa24.21■■□□□ 1.47
PTN-201ENST00000348225 FAM208AQ9UK61 1670 aaKnown RBP24.2■■□□□ 1.46
PTN-201ENST00000348225 MTHFSDQ2M296 383 aaKnown RBP24.2■■□□□ 1.46
PTN-201ENST00000348225 TSR2Q969E8 191 aaKnown RBP24.2■■□□□ 1.46
PTN-201ENST00000348225 ERBB3P21860 1342 aa24.19■■□□□ 1.46
PTN-201ENST00000348225 USHBP1Q8N6Y0 703 aa24.19■■□□□ 1.46
PTN-201ENST00000348225 AXIN2Q9Y2T1 843 aa24.19■■□□□ 1.46
PTN-201ENST00000348225 KIAA0232Q92628 1395 aa24.18■■□□□ 1.46
PTN-201ENST00000348225 HAP1P54257 671 aaPredicted RBP24.17■■□□□ 1.46
PTN-201ENST00000348225 RTF1Q92541 710 aaKnown RBP24.17■■□□□ 1.46
PTN-201ENST00000348225 LRRC59Q96AG4 307 aaKnown RBP24.17■■□□□ 1.46
PTN-201ENST00000348225 THUMPD2Q9BTF0 503 aaKnown RBP24.17■■□□□ 1.46
PTN-201ENST00000348225 PPP4R2Q9NY27 417 aa24.17■■□□□ 1.46
PTN-201ENST00000348225 LMO7Q8WWI1 1683 aa24.16■■□□□ 1.46
PTN-201ENST00000348225 FAM83GA6ND36 823 aa24.16■■□□□ 1.46
PTN-201ENST00000348225 HTATSF1O43719 755 aaKnown RBP24.16■■□□□ 1.46
PTN-201ENST00000348225 LAS1LQ9Y4W2 734 aaKnown RBP24.16■■□□□ 1.46
PTN-201ENST00000348225 ZNF853P0CG23 659 aa24.15■■□□□ 1.46
PTN-201ENST00000348225 EXOSC9Q06265 439 aaKnown RBP24.15■■□□□ 1.46
PTN-201ENST00000348225 CFAP44Q96MT7 982 aa24.15■■□□□ 1.46
PTN-201ENST00000348225 DCTN1Q14203 1278 aa24.13■■□□□ 1.45
PTN-201ENST00000348225 PLIN1O60240 522 aa24.13■■□□□ 1.45
PTN-201ENST00000348225 RARSP54136 660 aaKnown RBP24.13■■□□□ 1.45
PTN-201ENST00000348225 MAP3K5Q99683 1374 aa24.13■■□□□ 1.45
PTN-201ENST00000348225 GNAT3A8MTJ3 354 aa24.12■■□□□ 1.45
PTN-201ENST00000348225 CHRNA2Q15822 529 aa24.12■■□□□ 1.45
PTN-201ENST00000348225 MCM10Q7L590 875 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms