RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 NPM1P06748 294 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRAPPC6B-202ENST00000347691 API5Q9BZZ5 524 aaKnown RBP12.56□□□□□ -0.4
TRAPPC6B-202ENST00000347691 IFT57Q9NWB7 429 aa12.56□□□□□ -0.4
TRAPPC6B-202ENST00000347691 NFE2L2Q16236 605 aa12.56□□□□□ -0.4
TRAPPC6B-202ENST00000347691 CD163L1Q9NR16 1453 aa12.56□□□□□ -0.4
TRAPPC6B-202ENST00000347691 RABEP1Q15276 862 aa12.55□□□□□ -0.4
TRAPPC6B-202ENST00000347691 TBC1D9Q6ZT07 1266 aa12.55□□□□□ -0.4
TRAPPC6B-202ENST00000347691 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
TRAPPC6B-202ENST00000347691 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC6B-202ENST00000347691 ABCC4O15439 1325 aa12.55□□□□□ -0.4
TRAPPC6B-202ENST00000347691 NUCB2P80303 420 aa12.54□□□□□ -0.4
TRAPPC6B-202ENST00000347691 KIF2CQ99661 725 aa12.54□□□□□ -0.4
TRAPPC6B-202ENST00000347691 TPM2P07951 284 aa12.54□□□□□ -0.4
TRAPPC6B-202ENST00000347691 KLHL40Q2TBA0 621 aa12.54□□□□□ -0.4
TRAPPC6B-202ENST00000347691 YTHDC2Q9H6S0 1430 aaKnown RBP12.54□□□□□ -0.4
TRAPPC6B-202ENST00000347691 ATP7BP35670 1465 aa12.54□□□□□ -0.4
TRAPPC6B-202ENST00000347691 NEO1Q92859 1461 aa12.54□□□□□ -0.4
TRAPPC6B-202ENST00000347691 VAMP4O75379 141 aa12.53□□□□□ -0.4
TRAPPC6B-202ENST00000347691 PRKAR2BP31323 418 aa12.53□□□□□ -0.4
TRAPPC6B-202ENST00000347691 SAFB2Q14151 953 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRAPPC6B-202ENST00000347691 HSP90AA2PQ14568 343 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC6B-202ENST00000347691 CASC1Q6TDU7 716 aa12.52□□□□□ -0.41
TRAPPC6B-202ENST00000347691 PPP1R9BQ96SB3 815 aa12.52□□□□□ -0.41
TRAPPC6B-202ENST00000347691 STK26Q9P289 416 aa12.52□□□□□ -0.41
TRAPPC6B-202ENST00000347691 PRAM1Q96QH2 718 aa12.52□□□□□ -0.41
TRAPPC6B-202ENST00000347691 CWC22Q9HCG8 908 aaKnown RBP12.52□□□□□ -0.41
TRAPPC6B-202ENST00000347691 MINK1Q8N4C8 1332 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC6B-202ENST00000347691 TMEM131LA2VDJ0 1609 aa12.51□□□□□ -0.41
TRAPPC6B-202ENST00000347691 NASPP49321 788 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC6B-202ENST00000347691 ARHGEF40Q8TER5 1519 aa12.51□□□□□ -0.41
TRAPPC6B-202ENST00000347691 IDI1Q13907 227 aa12.5□□□□□ -0.41
TRAPPC6B-202ENST00000347691 NUTM2DQ5VT03 806 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC6B-202ENST00000347691 DDX49Q9Y6V7 483 aaKnown RBP12.5□□□□□ -0.41
TRAPPC6B-202ENST00000347691 DIP2CQ9Y2E4 1556 aa12.5□□□□□ -0.41
TRAPPC6B-202ENST00000347691 HS1BP3Q53T59 392 aa12.5□□□□□ -0.41
TRAPPC6B-202ENST00000347691 INTS3Q68E01 1043 aaKnown RBP12.5□□□□□ -0.41
TRAPPC6B-202ENST00000347691 DLC1Q96QB1 1528 aa12.5□□□□□ -0.41
TRAPPC6B-202ENST00000347691 PREX1Q8TCU6 1659 aa12.5□□□□□ -0.41
TRAPPC6B-202ENST00000347691 BAG4O95429 457 aaKnown RBP12.5□□□□□ -0.41
TRAPPC6B-202ENST00000347691 ZNF853P0CG23 659 aa12.5□□□□□ -0.41
TRAPPC6B-202ENST00000347691 CDK19Q9BWU1 502 aa12.5□□□□□ -0.41
TRAPPC6B-202ENST00000347691 CDK12Q9NYV4 1490 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC6B-202ENST00000347691 GAS2L3Q86XJ1 694 aa12.49□□□□□ -0.41
TRAPPC6B-202ENST00000347691 MYO5BQ9ULV0 1848 aa12.49□□□□□ -0.41
TRAPPC6B-202ENST00000347691 YEATS2Q9ULM3 1422 aa12.49□□□□□ -0.41
TRAPPC6B-202ENST00000347691 TWISTNBQ3B726 338 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC6B-202ENST00000347691 SSFA2P28290 1259 aa12.49□□□□□ -0.41
TRAPPC6B-202ENST00000347691 ZNF445P59923 1031 aa12.49□□□□□ -0.41
TRAPPC6B-202ENST00000347691 ZSCAN30Q86W11 494 aa12.49□□□□□ -0.41
TRAPPC6B-202ENST00000347691 POLKQ9UBT6 870 aa12.49□□□□□ -0.41
TRAPPC6B-202ENST00000347691 MAP2P11137 1827 aaKnown RBP12.48□□□□□ -0.41
TRAPPC6B-202ENST00000347691 ST18O60284 1047 aa12.48□□□□□ -0.41
TRAPPC6B-202ENST00000347691 GAS2L2Q8NHY3 880 aa12.48□□□□□ -0.41
TRAPPC6B-202ENST00000347691 DCTPP1Q9H773 170 aa12.48□□□□□ -0.41
TRAPPC6B-202ENST00000347691 ALKQ9UM73 1620 aa12.48□□□□□ -0.41
TRAPPC6B-202ENST00000347691 TTC22Q5TAA0 569 aa12.48□□□□□ -0.41
TRAPPC6B-202ENST00000347691 CPSF1Q10570 1443 aaKnown RBP12.48□□□□□ -0.41
TRAPPC6B-202ENST00000347691 MSNP26038 577 aaKnown RBP12.47□□□□□ -0.41
TRAPPC6B-202ENST00000347691 TERF1P54274 439 aa12.47□□□□□ -0.41
TRAPPC6B-202ENST00000347691 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
TRAPPC6B-202ENST00000347691 CABP1Q9NZU7 370 aa12.47□□□□□ -0.41
TRAPPC6B-202ENST00000347691 AATKQ6ZMQ8 1374 aa12.47□□□□□ -0.41
TRAPPC6B-202ENST00000347691 PLEKHM2Q8IWE5 1019 aa12.47□□□□□ -0.41
TRAPPC6B-202ENST00000347691 SIRT2Q8IXJ6 389 aa12.47□□□□□ -0.41
TRAPPC6B-202ENST00000347691 RPAP2Q8IXW5 612 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC6B-202ENST00000347691 C1orf115Q9H7X2 142 aa12.47□□□□□ -0.41
TRAPPC6B-202ENST00000347691 MBIPQ9NS73 344 aa12.47□□□□□ -0.41
TRAPPC6B-202ENST00000347691 EDC4Q6P2E9 1401 aaKnown RBP12.47□□□□□ -0.41
TRAPPC6B-202ENST00000347691 CD2BP2O95400 341 aaKnown RBP12.47□□□□□ -0.41
TRAPPC6B-202ENST00000347691 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC6B-202ENST00000347691 ERBB4Q15303 1308 aa12.46□□□□□ -0.41
TRAPPC6B-202ENST00000347691 REC8O95072 547 aa12.46□□□□□ -0.42
TRAPPC6B-202ENST00000347691 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.42
TRAPPC6B-202ENST00000347691 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
TRAPPC6B-202ENST00000347691 RIMS2Q9UQ26 1411 aa12.45□□□□□ -0.42
TRAPPC6B-202ENST00000347691 ANKRD44Q8N8A2 993 aa12.45□□□□□ -0.42
TRAPPC6B-202ENST00000347691 USP26Q9BXU7 913 aa12.45□□□□□ -0.42
TRAPPC6B-202ENST00000347691 DLG5Q8TDM6 1919 aa12.44□□□□□ -0.42
TRAPPC6B-202ENST00000347691 GSPT1P15170 499 aaKnown RBP12.44□□□□□ -0.42
TRAPPC6B-202ENST00000347691 IL13P35225 146 aa12.44□□□□□ -0.42
TRAPPC6B-202ENST00000347691 TSPYL6Q8N831 410 aa12.44□□□□□ -0.42
TRAPPC6B-202ENST00000347691 RBM42Q9BTD8 480 aaKnown RBP12.44□□□□□ -0.42
TRAPPC6B-202ENST00000347691 CYP2E1P05181 493 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC6B-202ENST00000347691 PHACTR3Q96KR7 559 aa12.44□□□□□ -0.42
TRAPPC6B-202ENST00000347691 HMOX1P09601 288 aa12.43□□□□□ -0.42
TRAPPC6B-202ENST00000347691 MCTP1Q6DN14 999 aa12.43□□□□□ -0.42
TRAPPC6B-202ENST00000347691 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRAPPC6B-202ENST00000347691 OFD1O75665 1012 aa12.43□□□□□ -0.42
TRAPPC6B-202ENST00000347691 PTPRCP08575 1304 aa12.42□□□□□ -0.42
TRAPPC6B-202ENST00000347691 RICTORQ6R327 1708 aa12.42□□□□□ -0.42
TRAPPC6B-202ENST00000347691 HMMRO75330 724 aa12.42□□□□□ -0.42
TRAPPC6B-202ENST00000347691 MCM2P49736 904 aa12.42□□□□□ -0.42
TRAPPC6B-202ENST00000347691 MCM5P33992 734 aa12.42□□□□□ -0.42
TRAPPC6B-202ENST00000347691 KNDC1Q76NI1 1749 aa12.42□□□□□ -0.42
TRAPPC6B-202ENST00000347691 ZSCAN23Q3MJ62 389 aa12.41□□□□□ -0.42
TRAPPC6B-202ENST00000347691 LMBRD1Q9NUN5 540 aa12.41□□□□□ -0.42
TRAPPC6B-202ENST00000347691 KIAA0232Q92628 1395 aa12.41□□□□□ -0.42
TRAPPC6B-202ENST00000347691 THUMPD2Q9BTF0 503 aaKnown RBP12.41□□□□□ -0.42
TRAPPC6B-202ENST00000347691 MBD3O95983 291 aa12.41□□□□□ -0.42
TRAPPC6B-202ENST00000347691 NCLP19338 710 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms