RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 DDX11Q96FC9 970 aa12.57□□□□□ -0.4
SMG7-201ENST00000347615 TRIM29Q14134 588 aa12.57□□□□□ -0.4
SMG7-201ENST00000347615 JAKMIP1Q96N16 626 aaKnown RBP12.57□□□□□ -0.4
SMG7-201ENST00000347615 DDX58O95786 925 aaKnown RBP12.57□□□□□ -0.4
SMG7-201ENST00000347615 GNAI3P08754 354 aa12.57□□□□□ -0.4
SMG7-201ENST00000347615 TBC1D9Q6ZT07 1266 aa12.57□□□□□ -0.4
SMG7-201ENST00000347615 MARCH6O60337 910 aa12.56□□□□□ -0.4
SMG7-201ENST00000347615 DTNBO60941 627 aa12.56□□□□□ -0.4
SMG7-201ENST00000347615 CHMP4AQ9BY43 222 aa12.56□□□□□ -0.4
SMG7-201ENST00000347615 BRPF1P55201 1214 aaPredicted RBP12.56□□□□□ -0.4
SMG7-201ENST00000347615 SYNE3Q6ZMZ3 975 aa12.56□□□□□ -0.4
SMG7-201ENST00000347615 CCDC83Q8IWF9 413 aa12.56□□□□□ -0.4
SMG7-201ENST00000347615 MBD3O95983 291 aa12.56□□□□□ -0.4
SMG7-201ENST00000347615 TPM2P07951 284 aa12.56□□□□□ -0.4
SMG7-201ENST00000347615 CASTP20810 708 aaKnown RBP12.56□□□□□ -0.4
SMG7-201ENST00000347615 ESCO1Q5FWF5 840 aa12.56□□□□□ -0.4
SMG7-201ENST00000347615 C16orf71Q8IYS4 520 aaPredicted RBP12.56□□□□□ -0.4
SMG7-201ENST00000347615 ZNF830Q96NB3 372 aaPredicted RBP12.56□□□□□ -0.4
SMG7-201ENST00000347615 PATL2C9JE40 543 aaKnown RBP12.55□□□□□ -0.4
SMG7-201ENST00000347615 NINLQ9Y2I6 1382 aa12.55□□□□□ -0.4
SMG7-201ENST00000347615 LARP1BQ659C4 914 aaKnown RBP12.55□□□□□ -0.4
SMG7-201ENST00000347615 AACSQ86V21 672 aa12.55□□□□□ -0.4
SMG7-201ENST00000347615 NFE2L2Q16236 605 aa12.55□□□□□ -0.4
SMG7-201ENST00000347615 TRDNQ13061 729 aa12.54□□□□□ -0.4
SMG7-201ENST00000347615 RRP12Q5JTH9 1297 aaKnown RBP12.54□□□□□ -0.4
SMG7-201ENST00000347615 XRCC6P12956 609 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMG7-201ENST00000347615 TBC1D32Q96NH3 1257 aa12.54□□□□□ -0.4
SMG7-201ENST00000347615 PLEKHH1Q9ULM0 1364 aa12.54□□□□□ -0.4
SMG7-201ENST00000347615 TNMDQ9H2S6 317 aa12.54□□□□□ -0.4
SMG7-201ENST00000347615 MNS1Q8NEH6 495 aa12.54□□□□□ -0.4
SMG7-201ENST00000347615 CBX1P83916 185 aa12.54□□□□□ -0.4
SMG7-201ENST00000347615 DNMBPQ6XZF7 1577 aa12.54□□□□□ -0.4
SMG7-201ENST00000347615 CYP46A1Q9Y6A2 500 aa12.53□□□□□ -0.4
SMG7-201ENST00000347615 FILIP1Q7Z7B0 1213 aa12.53□□□□□ -0.4
SMG7-201ENST00000347615 BICRAQ9NZM4 1560 aa12.53□□□□□ -0.4
SMG7-201ENST00000347615 IQGAP2Q13576 1575 aa12.53□□□□□ -0.4
SMG7-201ENST00000347615 RAPGEF4Q8WZA2 1011 aa12.53□□□□□ -0.4
SMG7-201ENST00000347615 CCDC34Q96HJ3 373 aa12.53□□□□□ -0.4
SMG7-201ENST00000347615 DMRT2Q9Y5R5 561 aa12.53□□□□□ -0.4
SMG7-201ENST00000347615 HSP90AB4PQ58FF6 505 aa12.52□□□□□ -0.4
SMG7-201ENST00000347615 RALYLQ86SE5 291 aaKnown RBP12.52□□□□□ -0.4
SMG7-201ENST00000347615 ZBTB9Q96C00 473 aa12.52□□□□□ -0.4
SMG7-201ENST00000347615 USP25Q9UHP3 1055 aa12.52□□□□□ -0.4
SMG7-201ENST00000347615 SPG7Q9UQ90 795 aa12.52□□□□□ -0.4
SMG7-201ENST00000347615 PDRG1Q9NUG6 133 aa12.52□□□□□ -0.4
SMG7-201ENST00000347615 PLEKHH2Q8IVE3 1493 aa12.52□□□□□ -0.41
SMG7-201ENST00000347615 PRPF40BQ6NWY9 871 aaKnown RBP12.52□□□□□ -0.41
SMG7-201ENST00000347615 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
SMG7-201ENST00000347615 CWC22Q9HCG8 908 aaKnown RBP12.52□□□□□ -0.41
SMG7-201ENST00000347615 FCHSD2O94868 740 aa12.52□□□□□ -0.41
SMG7-201ENST00000347615 GUCY1B3Q02153 619 aa12.52□□□□□ -0.41
SMG7-201ENST00000347615 FBXO31Q5XUX0 539 aaPredicted RBP12.52□□□□□ -0.41
SMG7-201ENST00000347615 OSCARQ8IYS5 282 aa12.52□□□□□ -0.41
SMG7-201ENST00000347615 SRCIN1Q9C0H9 1055 aa12.52□□□□□ -0.41
SMG7-201ENST00000347615 PSMA5P28066 241 aa12.51□□□□□ -0.41
SMG7-201ENST00000347615 ME1P48163 572 aa12.51□□□□□ -0.41
SMG7-201ENST00000347615 STAC3Q96MF2 364 aa12.51□□□□□ -0.41
SMG7-201ENST00000347615 ABCA10Q8WWZ4 1543 aa12.51□□□□□ -0.41
SMG7-201ENST00000347615 RTEL1-TNFRSF6BF6WH68 1400 aa12.51□□□□□ -0.41
SMG7-201ENST00000347615 DHX16O60231 1041 aaKnown RBP12.51□□□□□ -0.41
SMG7-201ENST00000347615 KINO60870 393 aaKnown RBP12.51□□□□□ -0.41
SMG7-201ENST00000347615 ZSCAN30Q86W11 494 aa12.51□□□□□ -0.41
SMG7-201ENST00000347615 CKAP2LQ8IYA6 745 aa12.51□□□□□ -0.41
SMG7-201ENST00000347615 GAS2L2Q8NHY3 880 aa12.51□□□□□ -0.41
SMG7-201ENST00000347615 JARID2Q92833 1246 aaPredicted RBP12.51□□□□□ -0.41
SMG7-201ENST00000347615 TSR1Q2NL82 804 aaKnown RBP12.51□□□□□ -0.41
SMG7-201ENST00000347615 WDR33Q9C0J8 1336 aaKnown RBP12.51□□□□□ -0.41
SMG7-201ENST00000347615 MAGI1Q96QZ7 1491 aaPredicted RBP12.51□□□□□ -0.41
SMG7-201ENST00000347615 CCT4P50991 539 aaKnown RBP12.5□□□□□ -0.41
SMG7-201ENST00000347615 TMX1Q9H3N1 280 aa12.5□□□□□ -0.41
SMG7-201ENST00000347615 ERICH4A6NGS2 130 aa12.5□□□□□ -0.41
SMG7-201ENST00000347615 ANXA1P04083 346 aa12.5□□□□□ -0.41
SMG7-201ENST00000347615 CPLX2Q6PUV4 134 aaKnown RBP12.5□□□□□ -0.41
SMG7-201ENST00000347615 FKBP4Q02790 459 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMG7-201ENST00000347615 VPS37DQ86XT2 251 aa12.5□□□□□ -0.41
SMG7-201ENST00000347615 MX1P20591 662 aa12.5□□□□□ -0.41
SMG7-201ENST00000347615 CCDC192P0DO97 292 aa12.49□□□□□ -0.41
SMG7-201ENST00000347615 KRT24Q2M2I5 525 aa12.49□□□□□ -0.41
SMG7-201ENST00000347615 SPATA32Q96LK8 384 aa12.49□□□□□ -0.41
SMG7-201ENST00000347615 LRRFIP2Q9Y608 721 aaKnown RBP12.49□□□□□ -0.41
SMG7-201ENST00000347615 NUDT16Q96DE0 195 aaKnown RBP12.49□□□□□ -0.41
SMG7-201ENST00000347615 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
SMG7-201ENST00000347615 MBIPQ9NS73 344 aa12.49□□□□□ -0.41
SMG7-201ENST00000347615 PIBF1Q8WXW3 757 aa12.49□□□□□ -0.41
SMG7-201ENST00000347615 BAG4O95429 457 aaKnown RBP12.49□□□□□ -0.41
SMG7-201ENST00000347615 ZNF530Q6P9A1 599 aaPredicted RBP12.49□□□□□ -0.41
SMG7-201ENST00000347615 CCDC8Q9H0W5 538 aaPredicted RBP12.49□□□□□ -0.41
SMG7-201ENST00000347615 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
SMG7-201ENST00000347615 DHX37Q8IY37 1157 aaKnown RBP12.49□□□□□ -0.41
SMG7-201ENST00000347615 CCDC141Q6ZP82 1450 aa12.48□□□□□ -0.41
SMG7-201ENST00000347615 STK38Q15208 465 aa12.48□□□□□ -0.41
SMG7-201ENST00000347615 TFIP11Q9UBB9 837 aaKnown RBP12.48□□□□□ -0.41
SMG7-201ENST00000347615 SPDYE4A6NLX3 237 aa12.48□□□□□ -0.41
SMG7-201ENST00000347615 TPM1P09493 284 aa12.48□□□□□ -0.41
SMG7-201ENST00000347615 NAP1L1P55209 391 aaKnown RBP12.48□□□□□ -0.41
SMG7-201ENST00000347615 HMGXB3Q12766 1538 aa12.48□□□□□ -0.41
SMG7-201ENST00000347615 G3V3G9 751 aa12.48□□□□□ -0.41
SMG7-201ENST00000347615 MCM2P49736 904 aa12.48□□□□□ -0.41
SMG7-201ENST00000347615 DCAF8Q5TAQ9 597 aa12.48□□□□□ -0.41
SMG7-201ENST00000347615 MRC2Q9UBG0 1479 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms