RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TRHP20396 242 aaPredicted RBP7.72□□□□□ -1.17
CLCN3-201ENST00000347613 LTKP29376 864 aa7.72□□□□□ -1.17
CLCN3-201ENST00000347613 NUDT16Q96DE0 195 aaKnown RBP7.72□□□□□ -1.17
CLCN3-201ENST00000347613 PEAK1Q9H792 1746 aa7.72□□□□□ -1.17
CLCN3-201ENST00000347613 FTSJ3Q8IY81 847 aaKnown RBP7.71□□□□□ -1.17
CLCN3-201ENST00000347613 NINLQ9Y2I6 1382 aa7.71□□□□□ -1.17
CLCN3-201ENST00000347613 ZMYM3Q14202 1370 aa7.71□□□□□ -1.18
CLCN3-201ENST00000347613 MAPK8IP3Q9UPT6 1336 aa7.71□□□□□ -1.18
CLCN3-201ENST00000347613 ZBTB7BO15156 539 aaPredicted RBP7.71□□□□□ -1.18
CLCN3-201ENST00000347613 HDGFL2Q7Z4V5 671 aaPredicted RBP7.71□□□□□ -1.18
CLCN3-201ENST00000347613 PMFBP1Q8TBY8 1022 aa7.71□□□□□ -1.18
CLCN3-201ENST00000347613 MRPL50Q8N5N7 158 aaKnown RBP7.71□□□□□ -1.18
CLCN3-201ENST00000347613 C3P01024 1663 aa7.71□□□□□ -1.18
CLCN3-201ENST00000347613 RGPD8O14715 1765 aaPredicted RBP7.7□□□□□ -1.18
CLCN3-201ENST00000347613 FCHSD2O94868 740 aa7.7□□□□□ -1.18
CLCN3-201ENST00000347613 ZNF853P0CG23 659 aa7.7□□□□□ -1.18
CLCN3-201ENST00000347613 LNPKQ9C0E8 428 aa7.7□□□□□ -1.18
CLCN3-201ENST00000347613 MON2Q7Z3U7 1717 aa7.7□□□□□ -1.18
CLCN3-201ENST00000347613 SOX12O15370 315 aa7.7□□□□□ -1.18
CLCN3-201ENST00000347613 CD2BP2O95400 341 aaKnown RBP7.7□□□□□ -1.18
CLCN3-201ENST00000347613 SMC5Q8IY18 1101 aa7.7□□□□□ -1.18
CLCN3-201ENST00000347613 MIS18AQ9NYP9 233 aa7.7□□□□□ -1.18
CLCN3-201ENST00000347613 FOXO3O43524 673 aa7.7□□□□□ -1.18
CLCN3-201ENST00000347613 GSE1Q14687 1217 aa7.7□□□□□ -1.18
CLCN3-201ENST00000347613 RWDD1Q9H446 243 aaPredicted RBP7.7□□□□□ -1.18
CLCN3-201ENST00000347613 AKAP12Q02952 1782 aa7.7□□□□□ -1.18
CLCN3-201ENST00000347613 MFAP1P55081 439 aaKnown RBP7.69□□□□□ -1.18
CLCN3-201ENST00000347613 HDAC1Q13547 482 aaPredicted RBP7.69□□□□□ -1.18
CLCN3-201ENST00000347613 ATP7BP35670 1465 aa7.69□□□□□ -1.18
CLCN3-201ENST00000347613 PTPRUQ92729 1446 aa7.69□□□□□ -1.18
CLCN3-201ENST00000347613 AGLP35573 1532 aa7.69□□□□□ -1.18
CLCN3-201ENST00000347613 NFE2L2Q16236 605 aa7.69□□□□□ -1.18
CLCN3-201ENST00000347613 HSP90AB2PQ58FF8 381 aa7.69□□□□□ -1.18
CLCN3-201ENST00000347613 USP35Q9P2H5 1018 aa7.69□□□□□ -1.18
CLCN3-201ENST00000347613 MCM10Q7L590 875 aa7.69□□□□□ -1.18
CLCN3-201ENST00000347613 C16orf71Q8IYS4 520 aaPredicted RBP7.69□□□□□ -1.18
CLCN3-201ENST00000347613 KIF2CQ99661 725 aa7.69□□□□□ -1.18
CLCN3-201ENST00000347613 IL16Q14005 1332 aa7.68□□□□□ -1.18
CLCN3-201ENST00000347613 ADAMTS13Q76LX8 1427 aa7.68□□□□□ -1.18
CLCN3-201ENST00000347613 UBE2Q2Q8WVN8 375 aa7.68□□□□□ -1.18
CLCN3-201ENST00000347613 SLC26A8Q96RN1 970 aa7.68□□□□□ -1.18
CLCN3-201ENST00000347613 UBR1Q8IWV7 1749 aa7.68□□□□□ -1.18
CLCN3-201ENST00000347613 REREQ9P2R6 1566 aa7.68□□□□□ -1.18
CLCN3-201ENST00000347613 EIF4A2Q14240 407 aaKnown RBP7.68□□□□□ -1.18
CLCN3-201ENST00000347613 RBM42Q9BTD8 480 aaKnown RBP7.68□□□□□ -1.18
CLCN3-201ENST00000347613 NUCB1Q02818 461 aa7.67□□□□□ -1.18
CLCN3-201ENST00000347613 OTUD7AQ8TE49 926 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-201ENST00000347613 EDC4Q6P2E9 1401 aaKnown RBP7.67□□□□□ -1.18
CLCN3-201ENST00000347613 NRKQ7Z2Y5 1582 aa7.67□□□□□ -1.18
CLCN3-201ENST00000347613 DDX19BQ9UMR2 479 aa7.67□□□□□ -1.18
CLCN3-201ENST00000347613 RGS12O14924 1447 aa7.67□□□□□ -1.18
CLCN3-201ENST00000347613 ZNF692Q9BU19 519 aaPredicted RBP7.66□□□□□ -1.18
CLCN3-201ENST00000347613 SULT6B1Q6IMI4 303 aa7.66□□□□□ -1.18
CLCN3-201ENST00000347613 CCDC61Q9Y6R9 512 aa7.66□□□□□ -1.18
CLCN3-201ENST00000347613 ACEP12821 1306 aa7.66□□□□□ -1.18
CLCN3-201ENST00000347613 RBM33Q96EV2 1170 aaKnown RBP7.66□□□□□ -1.18
CLCN3-201ENST00000347613 C22orf23Q9BZE7 217 aa7.66□□□□□ -1.18
CLCN3-201ENST00000347613 PPP6R1Q9UPN7 881 aa7.66□□□□□ -1.18
CLCN3-201ENST00000347613 CT47B1P0C2W7 299 aaPredicted RBP7.65□□□□□ -1.18
CLCN3-201ENST00000347613 ITSN1Q15811 1721 aa7.65□□□□□ -1.18
CLCN3-201ENST00000347613 TWISTNBQ3B726 338 aaPredicted RBP7.65□□□□□ -1.18
CLCN3-201ENST00000347613 CHD1LQ86WJ1 897 aa7.65□□□□□ -1.18
CLCN3-201ENST00000347613 AK9Q5TCS8 1911 aa7.65□□□□□ -1.18
CLCN3-201ENST00000347613 CDK12Q9NYV4 1490 aaPredicted RBP7.65□□□□□ -1.18
CLCN3-201ENST00000347613 GSPT1P15170 499 aaKnown RBP7.65□□□□□ -1.18
CLCN3-201ENST00000347613 ALDH1L2Q3SY69 923 aa7.65□□□□□ -1.18
CLCN3-201ENST00000347613 ABCC4O15439 1325 aa7.65□□□□□ -1.18
CLCN3-201ENST00000347613 PTCH1Q13635 1447 aa7.65□□□□□ -1.19
CLCN3-201ENST00000347613 ANKRD45Q5TZF3 282 aa7.65□□□□□ -1.19
CLCN3-201ENST00000347613 G2E3Q7L622 706 aa7.65□□□□□ -1.19
CLCN3-201ENST00000347613 RGPD1P0DJD0 1748 aa7.65□□□□□ -1.19
CLCN3-201ENST00000347613 CFAP44Q96MT7 982 aa7.64□□□□□ -1.19
CLCN3-201ENST00000347613 TTC21BQ7Z4L5 1316 aa7.64□□□□□ -1.19
CLCN3-201ENST00000347613 PIK3R4Q99570 1358 aa7.64□□□□□ -1.19
CLCN3-201ENST00000347613 TOPAZ1Q8N9V7 1692 aa7.64□□□□□ -1.19
CLCN3-201ENST00000347613 BRPF1P55201 1214 aaPredicted RBP7.64□□□□□ -1.19
CLCN3-201ENST00000347613 NUTM2GQ5VZR2 741 aa7.64□□□□□ -1.19
CLCN3-201ENST00000347613 COG3Q96JB2 828 aa7.64□□□□□ -1.19
CLCN3-201ENST00000347613 AATKQ6ZMQ8 1374 aa7.64□□□□□ -1.19
CLCN3-201ENST00000347613 TMEM2Q9UHN6 1383 aa7.64□□□□□ -1.19
CLCN3-201ENST00000347613 TECPR2O15040 1411 aa7.64□□□□□ -1.19
CLCN3-201ENST00000347613 SMARCA5O60264 1052 aaPredicted RBP7.64□□□□□ -1.19
CLCN3-201ENST00000347613 IFT57Q9NWB7 429 aa7.64□□□□□ -1.19
CLCN3-201ENST00000347613 FOXD4L1Q9NU39 408 aa7.63□□□□□ -1.19
CLCN3-201ENST00000347613 CEP170BQ9Y4F5 1589 aaPredicted RBP7.63□□□□□ -1.19
CLCN3-201ENST00000347613 PDIA4P13667 645 aaKnown RBP7.63□□□□□ -1.19
CLCN3-201ENST00000347613 DDIT3P35638 169 aa7.63□□□□□ -1.19
CLCN3-201ENST00000347613 MAP3K19Q56UN5 1328 aa7.63□□□□□ -1.19
CLCN3-201ENST00000347613 OVOS2A0A0J9YW53 1432 aa7.63□□□□□ -1.19
CLCN3-201ENST00000347613 OVOS2Q6IE36 1432 aa7.63□□□□□ -1.19
CLCN3-201ENST00000347613 SSH2Q76I76 1423 aa7.63□□□□□ -1.19
CLCN3-201ENST00000347613 MARF1Q9Y4F3 1742 aaKnown RBP7.63□□□□□ -1.19
CLCN3-201ENST00000347613 ANO8Q9HCE9 1232 aaPredicted RBP7.63□□□□□ -1.19
CLCN3-201ENST00000347613 KIF16BQ96L93 1317 aa7.63□□□□□ -1.19
CLCN3-201ENST00000347613 NALCNQ8IZF0 1738 aa7.62□□□□□ -1.19
CLCN3-201ENST00000347613 F6X3S4 739 aa7.62□□□□□ -1.19
CLCN3-201ENST00000347613 AAMPQ13685 434 aa7.62□□□□□ -1.19
CLCN3-201ENST00000347613 MTHFSDQ2M296 383 aaKnown RBP7.62□□□□□ -1.19
CLCN3-201ENST00000347613 CRB1P82279 1406 aa7.62□□□□□ -1.19
CLCN3-201ENST00000347613 ATP10DQ9P241 1426 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms