RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 KCNH5Q8NCM2 988 aa28.16■■■□□ 2.1
TSPAN3-202ENST00000346495 RNF123Q5XPI4 1314 aa28.15■■■□□ 2.1
TSPAN3-202ENST00000346495 WDR63Q8IWG1 891 aa28.15■■■□□ 2.1
TSPAN3-202ENST00000346495 RCAN3Q9UKA8 241 aa28.15■■■□□ 2.1
TSPAN3-202ENST00000346495 RGPD1P0DJD0 1748 aa28.15■■■□□ 2.1
TSPAN3-202ENST00000346495 NFAT5O94916 1531 aa28.15■■■□□ 2.1
TSPAN3-202ENST00000346495 LTN1O94822 1766 aa28.15■■■□□ 2.1
TSPAN3-202ENST00000346495 HMOX1P09601 288 aa28.14■■■□□ 2.1
TSPAN3-202ENST00000346495 ALS2Q96Q42 1657 aa28.14■■■□□ 2.09
TSPAN3-202ENST00000346495 NPHP3Q7Z494 1330 aa28.13■■■□□ 2.09
TSPAN3-202ENST00000346495 SLIT3O75094 1523 aa28.13■■■□□ 2.09
TSPAN3-202ENST00000346495 RTL1A6NKG5 1358 aa28.13■■■□□ 2.09
TSPAN3-202ENST00000346495 HOXC9P31274 260 aa28.1■■■□□ 2.09
TSPAN3-202ENST00000346495 ARHGEF10O15013 1369 aa28.09■■■□□ 2.09
TSPAN3-202ENST00000346495 PHRF1Q9P1Y6 1649 aaKnown RBP28.09■■■□□ 2.09
TSPAN3-202ENST00000346495 SPINK5Q9NQ38 1064 aaPredicted RBP28.09■■■□□ 2.09
TSPAN3-202ENST00000346495 USP19O94966 1318 aa28.09■■■□□ 2.09
TSPAN3-202ENST00000346495 RIPK4P57078 832 aa28.07■■■□□ 2.08
TSPAN3-202ENST00000346495 ERICH6BQ5W0A0 696 aa28.07■■■□□ 2.08
TSPAN3-202ENST00000346495 LMOD2Q6P5Q4 547 aa28.07■■■□□ 2.08
TSPAN3-202ENST00000346495 NFE2L2Q16236 605 aa28.06■■■□□ 2.08
TSPAN3-202ENST00000346495 SLAIN2Q9P270 581 aa28.06■■■□□ 2.08
TSPAN3-202ENST00000346495 TRIM35Q9UPQ4 493 aa28.06■■■□□ 2.08
TSPAN3-202ENST00000346495 PXDNQ92626 1479 aa28.05■■■□□ 2.08
TSPAN3-202ENST00000346495 SULT6B1Q6IMI4 303 aa28.05■■■□□ 2.08
TSPAN3-202ENST00000346495 BRINP3Q76B58 766 aa28.05■■■□□ 2.08
TSPAN3-202ENST00000346495 GCP02774 474 aa28.04■■■□□ 2.08
TSPAN3-202ENST00000346495 IRX6P78412 446 aaPredicted RBP28.04■■■□□ 2.08
TSPAN3-202ENST00000346495 PHACTR3Q96KR7 559 aa28.04■■■□□ 2.08
TSPAN3-202ENST00000346495 IP6K1Q92551 441 aa28.03■■■□□ 2.08
TSPAN3-202ENST00000346495 DDX17Q92841 729 aaKnown RBP28.03■■■□□ 2.08
TSPAN3-202ENST00000346495 TNS3Q68CZ2 1445 aa28.02■■■□□ 2.08
TSPAN3-202ENST00000346495 RRP1P56182 461 aaKnown RBP28.01■■■□□ 2.07
TSPAN3-202ENST00000346495 IL16Q14005 1332 aa28.01■■■□□ 2.07
TSPAN3-202ENST00000346495 AEBP1Q8IUX7 1158 aa28.01■■■□□ 2.07
TSPAN3-202ENST00000346495 IGSF1Q8N6C5 1336 aa28.01■■■□□ 2.07
TSPAN3-202ENST00000346495 MYH16Q9H6N6 1097 aa28.01■■■□□ 2.07
TSPAN3-202ENST00000346495 DLG5Q8TDM6 1919 aa27.99■■■□□ 2.07
TSPAN3-202ENST00000346495 KDRP35968 1356 aa27.99■■■□□ 2.07
TSPAN3-202ENST00000346495 ARHGEF25Q86VW2 580 aa27.99■■■□□ 2.07
TSPAN3-202ENST00000346495 EYA1Q99502 592 aa27.99■■■□□ 2.07
TSPAN3-202ENST00000346495 MED1Q15648 1581 aaPredicted RBP27.99■■■□□ 2.07
TSPAN3-202ENST00000346495 SPATA31A3Q5VYP0 1347 aa27.97■■■□□ 2.07
TSPAN3-202ENST00000346495 LMOD3Q0VAK6 560 aa27.97■■■□□ 2.07
TSPAN3-202ENST00000346495 CALD1Q05682 793 aaKnown RBP27.94■■■□□ 2.06
TSPAN3-202ENST00000346495 ZBTB7CA1YPR0 619 aa27.93■■■□□ 2.06
TSPAN3-202ENST00000346495 SOS2Q07890 1332 aaPredicted RBP27.93■■■□□ 2.06
TSPAN3-202ENST00000346495 LTBP4Q8N2S1 1624 aa27.92■■■□□ 2.06
TSPAN3-202ENST00000346495 PLEKHG5O94827 1062 aa27.92■■■□□ 2.06
TSPAN3-202ENST00000346495 LTV1Q96GA3 475 aaPredicted RBP27.92■■■□□ 2.06
TSPAN3-202ENST00000346495 CRYBG1Q9Y4K1 1723 aa27.92■■■□□ 2.06
TSPAN3-202ENST00000346495 NHSL1Q5SYE7 1610 aa27.92■■■□□ 2.06
TSPAN3-202ENST00000346495 FANCIQ9NVI1 1328 aa27.88■■■□□ 2.05
TSPAN3-202ENST00000346495 PPP4R2Q9NY27 417 aa27.87■■■□□ 2.05
TSPAN3-202ENST00000346495 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.86■■■□□ 2.05
TSPAN3-202ENST00000346495 ABCC6O95255 1503 aa27.85■■■□□ 2.05
TSPAN3-202ENST00000346495 CT47B1P0C2W7 299 aaPredicted RBP27.85■■■□□ 2.05
TSPAN3-202ENST00000346495 ZC3H6P61129 1189 aaKnown RBP27.85■■■□□ 2.05
TSPAN3-202ENST00000346495 RGPD2P0DJD1 1756 aa27.84■■■□□ 2.05
TSPAN3-202ENST00000346495 RGPD5Q99666 1765 aa27.84■■■□□ 2.05
TSPAN3-202ENST00000346495 GAS2L2Q8NHY3 880 aa27.84■■■□□ 2.05
TSPAN3-202ENST00000346495 TSR2Q969E8 191 aaKnown RBP27.84■■■□□ 2.05
TSPAN3-202ENST00000346495 ANKRD24Q8TF21 1146 aa27.82■■■□□ 2.04
TSPAN3-202ENST00000346495 IFT57Q9NWB7 429 aa27.82■■■□□ 2.04
TSPAN3-202ENST00000346495 CAMTA1Q9Y6Y1 1673 aa27.82■■■□□ 2.04
TSPAN3-202ENST00000346495 COL18A1P39060 1754 aa27.82■■■□□ 2.04
TSPAN3-202ENST00000346495 GNAI1P63096 354 aa27.81■■■□□ 2.04
TSPAN3-202ENST00000346495 MTHFSDQ2M296 383 aaKnown RBP27.81■■■□□ 2.04
TSPAN3-202ENST00000346495 NBPF6Q5VWK0 638 aa27.81■■■□□ 2.04
TSPAN3-202ENST00000346495 CABLES1Q8TDN4 633 aa27.81■■■□□ 2.04
TSPAN3-202ENST00000346495 NBPF4Q96M43 638 aa27.81■■■□□ 2.04
TSPAN3-202ENST00000346495 THUMPD2Q9BTF0 503 aaKnown RBP27.81■■■□□ 2.04
TSPAN3-202ENST00000346495 NCAPD2Q15021 1401 aa27.8■■■□□ 2.04
TSPAN3-202ENST00000346495 CPDO75976 1380 aa27.8■■■□□ 2.04
TSPAN3-202ENST00000346495 PLIN1O60240 522 aa27.8■■■□□ 2.04
TSPAN3-202ENST00000346495 FAM83GA6ND36 823 aa27.79■■■□□ 2.04
TSPAN3-202ENST00000346495 EXOSC9Q06265 439 aaKnown RBP27.79■■■□□ 2.04
TSPAN3-202ENST00000346495 AXIN2Q9Y2T1 843 aa27.79■■■□□ 2.04
TSPAN3-202ENST00000346495 ZNF853P0CG23 659 aa27.78■■■□□ 2.04
TSPAN3-202ENST00000346495 USHBP1Q8N6Y0 703 aa27.78■■■□□ 2.04
TSPAN3-202ENST00000346495 ROBO1Q9Y6N7 1651 aa27.78■■■□□ 2.04
TSPAN3-202ENST00000346495 RARSP54136 660 aaKnown RBP27.78■■■□□ 2.04
TSPAN3-202ENST00000346495 LAS1LQ9Y4W2 734 aaKnown RBP27.78■■■□□ 2.04
TSPAN3-202ENST00000346495 BCAR3O75815 825 aa27.77■■■□□ 2.04
TSPAN3-202ENST00000346495 CFAP44Q96MT7 982 aa27.77■■■□□ 2.04
TSPAN3-202ENST00000346495 ABCA3Q99758 1704 aa27.76■■■□□ 2.03
TSPAN3-202ENST00000346495 HTATSF1O43719 755 aaKnown RBP27.76■■■□□ 2.03
TSPAN3-202ENST00000346495 DCTN1Q14203 1278 aa27.76■■■□□ 2.03
TSPAN3-202ENST00000346495 LRRC59Q96AG4 307 aaKnown RBP27.76■■■□□ 2.03
TSPAN3-202ENST00000346495 ERBB3P21860 1342 aa27.75■■■□□ 2.03
TSPAN3-202ENST00000346495 FAM208AQ9UK61 1670 aaKnown RBP27.75■■■□□ 2.03
TSPAN3-202ENST00000346495 RTF1Q92541 710 aaKnown RBP27.75■■■□□ 2.03
TSPAN3-202ENST00000346495 LMO7Q8WWI1 1683 aa27.74■■■□□ 2.03
TSPAN3-202ENST00000346495 KIAA0232Q92628 1395 aa27.74■■■□□ 2.03
TSPAN3-202ENST00000346495 AHDC1Q5TGY3 1603 aaPredicted RBP27.73■■■□□ 2.03
TSPAN3-202ENST00000346495 MCM10Q7L590 875 aa27.72■■■□□ 2.03
TSPAN3-202ENST00000346495 EXOC6Q8TAG9 804 aa27.71■■■□□ 2.03
TSPAN3-202ENST00000346495 MBIPQ9NS73 344 aa27.71■■■□□ 2.03
TSPAN3-202ENST00000346495 MAP3K5Q99683 1374 aa27.71■■■□□ 2.03
TSPAN3-202ENST00000346495 GNAT3A8MTJ3 354 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms