RNA–Protein interactions for RNA: ENST00000344135.5

TRIO-201, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-201ENST00000344135 AMPHP49418 695 aa11.19□□□□□ -0.62
TRIO-201ENST00000344135 DCTN1Q14203 1278 aa11.19□□□□□ -0.62
TRIO-201ENST00000344135 EXOC6Q8TAG9 804 aa11.19□□□□□ -0.62
TRIO-201ENST00000344135 PHF23Q9BUL5 403 aaPredicted RBP11.19□□□□□ -0.62
TRIO-201ENST00000344135 PEAK1Q9H792 1746 aa11.19□□□□□ -0.62
TRIO-201ENST00000344135 ATF3P18847 181 aa11.18□□□□□ -0.62
TRIO-201ENST00000344135 E9PSI1 815 aa11.18□□□□□ -0.62
TRIO-201ENST00000344135 FCHSD2O94868 740 aa11.18□□□□□ -0.62
TRIO-201ENST00000344135 USP31Q70CQ4 1352 aa11.18□□□□□ -0.62
TRIO-201ENST00000344135 CDK12Q9NYV4 1490 aaPredicted RBP11.18□□□□□ -0.62
TRIO-201ENST00000344135 STRCQ7RTU9 1775 aa11.17□□□□□ -0.62
TRIO-201ENST00000344135 LAS1LQ9Y4W2 734 aaKnown RBP11.17□□□□□ -0.62
TRIO-201ENST00000344135 USHBP1Q8N6Y0 703 aa11.17□□□□□ -0.62
TRIO-201ENST00000344135 C1orf167Q5SNV9 1468 aa11.16□□□□□ -0.62
TRIO-201ENST00000344135 NWD1Q149M9 1564 aa11.16□□□□□ -0.62
TRIO-201ENST00000344135 CABLES1Q8TDN4 633 aa11.16□□□□□ -0.62
TRIO-201ENST00000344135 KRT28Q7Z3Y7 464 aa11.16□□□□□ -0.62
TRIO-201ENST00000344135 EYA1Q99502 592 aa11.15□□□□□ -0.62
TRIO-201ENST00000344135 TNNQ9UQP3 1299 aa11.14□□□□□ -0.63
TRIO-201ENST00000344135 HOXC9P31274 260 aa11.14□□□□□ -0.63
TRIO-201ENST00000344135 PPP4R2Q9NY27 417 aa11.14□□□□□ -0.63
TRIO-201ENST00000344135 ZC3H6P61129 1189 aaKnown RBP11.14□□□□□ -0.63
TRIO-201ENST00000344135 CRBNQ96SW2 442 aa11.14□□□□□ -0.63
TRIO-201ENST00000344135 MARF1Q9Y4F3 1742 aaKnown RBP11.14□□□□□ -0.63
TRIO-201ENST00000344135 FANCIQ9NVI1 1328 aa11.13□□□□□ -0.63
TRIO-201ENST00000344135 MST1RQ04912 1400 aa11.13□□□□□ -0.63
TRIO-201ENST00000344135 FLT4P35916 1363 aa11.13□□□□□ -0.63
TRIO-201ENST00000344135 ELL2O00472 640 aaPredicted RBP11.13□□□□□ -0.63
TRIO-201ENST00000344135 GCP02774 474 aa11.13□□□□□ -0.63
TRIO-201ENST00000344135 CCDC27Q2M243 656 aa11.13□□□□□ -0.63
TRIO-201ENST00000344135 WDR63Q8IWG1 891 aa11.13□□□□□ -0.63
TRIO-201ENST00000344135 FRAT1Q92837 279 aaPredicted RBP11.13□□□□□ -0.63
TRIO-201ENST00000344135 EXOSC9Q06265 439 aaKnown RBP11.13□□□□□ -0.63
TRIO-201ENST00000344135 NFE2L2Q16236 605 aa11.13□□□□□ -0.63
TRIO-201ENST00000344135 LRRC59Q96AG4 307 aaKnown RBP11.13□□□□□ -0.63
TRIO-201ENST00000344135 MCM10Q7L590 875 aa11.12□□□□□ -0.63
TRIO-201ENST00000344135 SBNO1A3KN83 1393 aa11.12□□□□□ -0.63
TRIO-201ENST00000344135 TCERG1O14776 1098 aaKnown RBP11.12□□□□□ -0.63
TRIO-201ENST00000344135 NEFMP07197 916 aa11.12□□□□□ -0.63
TRIO-201ENST00000344135 AXIN2Q9Y2T1 843 aa11.12□□□□□ -0.63
TRIO-201ENST00000344135 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
TRIO-201ENST00000344135 SKAP1Q86WV1 359 aa11.11□□□□□ -0.63
TRIO-201ENST00000344135 CCDC136Q96JN2 1154 aa11.11□□□□□ -0.63
TRIO-201ENST00000344135 MSH6P52701 1360 aa11.11□□□□□ -0.63
TRIO-201ENST00000344135 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
TRIO-201ENST00000344135 NGEFQ8N5V2 710 aa11.1□□□□□ -0.63
TRIO-201ENST00000344135 MIS18AQ9NYP9 233 aa11.1□□□□□ -0.63
TRIO-201ENST00000344135 RARSP54136 660 aaKnown RBP11.1□□□□□ -0.63
TRIO-201ENST00000344135 KRT24Q2M2I5 525 aa11.1□□□□□ -0.63
TRIO-201ENST00000344135 BRINP3Q76B58 766 aa11.1□□□□□ -0.63
TRIO-201ENST00000344135 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
TRIO-201ENST00000344135 PANK1Q8TE04 598 aa11.09□□□□□ -0.63
TRIO-201ENST00000344135 XIRP1Q702N8 1843 aaKnown RBP11.09□□□□□ -0.63
TRIO-201ENST00000344135 NBPF6Q5VWK0 638 aa11.09□□□□□ -0.63
TRIO-201ENST00000344135 TSPYL6Q8N831 410 aa11.09□□□□□ -0.63
TRIO-201ENST00000344135 NBPF4Q96M43 638 aa11.09□□□□□ -0.63
TRIO-201ENST00000344135 CHRNA2Q15822 529 aa11.09□□□□□ -0.63
TRIO-201ENST00000344135 PNNQ9H307 717 aaKnown RBP11.09□□□□□ -0.63
TRIO-201ENST00000344135 MYH16Q9H6N6 1097 aa11.09□□□□□ -0.63
TRIO-201ENST00000344135 SLAIN2Q9P270 581 aa11.08□□□□□ -0.64
TRIO-201ENST00000344135 DLG5Q8TDM6 1919 aa11.08□□□□□ -0.64
TRIO-201ENST00000344135 RLBP1P12271 317 aa11.08□□□□□ -0.64
TRIO-201ENST00000344135 IGSF1Q8N6C5 1336 aa11.07□□□□□ -0.64
TRIO-201ENST00000344135 ARHGEF25Q86VW2 580 aa11.07□□□□□ -0.64
TRIO-201ENST00000344135 IP6K1Q92551 441 aa11.07□□□□□ -0.64
TRIO-201ENST00000344135 MBIPQ9NS73 344 aa11.07□□□□□ -0.64
TRIO-201ENST00000344135 LTN1O94822 1766 aa11.07□□□□□ -0.64
TRIO-201ENST00000344135 NFAT5O94916 1531 aa11.07□□□□□ -0.64
TRIO-201ENST00000344135 CANXP27824 592 aaKnown RBP11.07□□□□□ -0.64
TRIO-201ENST00000344135 SSH1Q8WYL5 1049 aa11.06□□□□□ -0.64
TRIO-201ENST00000344135 COG6Q9Y2V7 657 aa11.06□□□□□ -0.64
TRIO-201ENST00000344135 ERICH6BQ5W0A0 696 aa11.06□□□□□ -0.64
TRIO-201ENST00000344135 C8orf58Q8NAV2 365 aa11.05□□□□□ -0.64
TRIO-201ENST00000344135 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
TRIO-201ENST00000344135 RGPD1P0DJD0 1748 aa11.05□□□□□ -0.64
TRIO-201ENST00000344135 NPHP3Q7Z494 1330 aa11.05□□□□□ -0.64
TRIO-201ENST00000344135 TRPM3Q9HCF6 1732 aaPredicted RBP11.05□□□□□ -0.64
TRIO-201ENST00000344135 SMC4Q9NTJ3 1288 aa11.04□□□□□ -0.64
TRIO-201ENST00000344135 KDRP35968 1356 aa11.04□□□□□ -0.64
TRIO-201ENST00000344135 RGPD2P0DJD1 1756 aa11.04□□□□□ -0.64
TRIO-201ENST00000344135 ANKRD24Q8TF21 1146 aa11.04□□□□□ -0.64
TRIO-201ENST00000344135 ARHGEF10O15013 1369 aa11.04□□□□□ -0.64
TRIO-201ENST00000344135 TSHZ2Q9NRE2 1034 aa11.04□□□□□ -0.64
TRIO-201ENST00000344135 MED1Q15648 1581 aaPredicted RBP11.03□□□□□ -0.64
TRIO-201ENST00000344135 USP19O94966 1318 aa11.03□□□□□ -0.64
TRIO-201ENST00000344135 DCCP43146 1447 aa11.03□□□□□ -0.64
TRIO-201ENST00000344135 ZNF853P0CG23 659 aa11.02□□□□□ -0.64
TRIO-201ENST00000344135 SPATA31A3Q5VYP0 1347 aa11.02□□□□□ -0.64
TRIO-201ENST00000344135 CFAP44Q96MT7 982 aa11.02□□□□□ -0.65
TRIO-201ENST00000344135 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.02□□□□□ -0.65
TRIO-201ENST00000344135 IL16Q14005 1332 aa11.02□□□□□ -0.65
TRIO-201ENST00000344135 NCBP3Q53F19 620 aaKnown RBP11.01□□□□□ -0.65
TRIO-201ENST00000344135 RGPD5Q99666 1765 aa11.01□□□□□ -0.65
TRIO-201ENST00000344135 VAMP4O75379 141 aa11.01□□□□□ -0.65
TRIO-201ENST00000344135 IL17REQ8NFR9 667 aa11.01□□□□□ -0.65
TRIO-201ENST00000344135 PXDNQ92626 1479 aa11.01□□□□□ -0.65
TRIO-201ENST00000344135 NOB1Q9ULX3 412 aaKnown RBP11.01□□□□□ -0.65
TRIO-201ENST00000344135 KIAA0232Q92628 1395 aa11.01□□□□□ -0.65
TRIO-201ENST00000344135 GNAI1P63096 354 aa11.01□□□□□ -0.65
TRIO-201ENST00000344135 IFT57Q9NWB7 429 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms