RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 ZNF830Q96NB3 372 aaPredicted RBP18.76■□□□□ 0.59
SNX18-202ENST00000343017 TRPM2O94759 1503 aa18.76■□□□□ 0.59
SNX18-202ENST00000343017 SASS6Q6UVJ0 657 aa18.76■□□□□ 0.59
SNX18-202ENST00000343017 THUMPD2Q9BTF0 503 aaKnown RBP18.75■□□□□ 0.59
SNX18-202ENST00000343017 PTMAP06454 111 aaKnown RBP18.75■□□□□ 0.59
SNX18-202ENST00000343017 FOXD4L6Q3SYB3 417 aaPredicted RBP18.75■□□□□ 0.59
SNX18-202ENST00000343017 FOXD4L3Q6VB84 417 aaPredicted RBP18.75■□□□□ 0.59
SNX18-202ENST00000343017 SMAP1Q8IYB5 467 aaPredicted RBP18.75■□□□□ 0.59
SNX18-202ENST00000343017 APBB1O00213 710 aa18.74■□□□□ 0.59
SNX18-202ENST00000343017 RABEP1Q15276 862 aa18.74■□□□□ 0.59
SNX18-202ENST00000343017 DNTTIP2Q5QJE6 756 aaKnown RBP18.74■□□□□ 0.59
SNX18-202ENST00000343017 GCC1Q96CN9 775 aa18.74■□□□□ 0.59
SNX18-202ENST00000343017 CSPP1Q1MSJ5 1256 aa18.74■□□□□ 0.59
SNX18-202ENST00000343017 TPRNQ4KMQ1 711 aa18.74■□□□□ 0.59
SNX18-202ENST00000343017 LRSAM1Q6UWE0 723 aa18.74■□□□□ 0.59
SNX18-202ENST00000343017 OTUD7AQ8TE49 926 aaPredicted RBP18.74■□□□□ 0.59
SNX18-202ENST00000343017 CABP2Q9NPB3 220 aa18.74■□□□□ 0.59
SNX18-202ENST00000343017 C17orf53Q8N3J3 647 aaPredicted RBP18.73■□□□□ 0.59
SNX18-202ENST00000343017 TSPYL6Q8N831 410 aa18.73■□□□□ 0.59
SNX18-202ENST00000343017 USP26Q9BXU7 913 aa18.73■□□□□ 0.59
SNX18-202ENST00000343017 CCDC39Q9UFE4 941 aa18.72■□□□□ 0.59
SNX18-202ENST00000343017 ABCA6Q8N139 1617 aa18.72■□□□□ 0.59
SNX18-202ENST00000343017 PLEKHM2Q8IWE5 1019 aa18.72■□□□□ 0.59
SNX18-202ENST00000343017 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.72■□□□□ 0.59
SNX18-202ENST00000343017 CBX1P83916 185 aa18.71■□□□□ 0.59
SNX18-202ENST00000343017 CFAP74Q9C0B2 1584 aa18.71■□□□□ 0.59
SNX18-202ENST00000343017 ARAP3Q8WWN8 1544 aa18.7■□□□□ 0.58
SNX18-202ENST00000343017 FBLN1P23142 703 aa18.7■□□□□ 0.58
SNX18-202ENST00000343017 ABCC11Q96J66 1382 aa18.7■□□□□ 0.58
SNX18-202ENST00000343017 CCDC94Q9BW85 323 aaPredicted RBP18.69■□□□□ 0.58
SNX18-202ENST00000343017 POGZQ7Z3K3 1410 aa18.69■□□□□ 0.58
SNX18-202ENST00000343017 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
SNX18-202ENST00000343017 ZSCAN20P17040 1043 aaPredicted RBP18.68■□□□□ 0.58
SNX18-202ENST00000343017 NOL8Q76FK4 1167 aaKnown RBP18.68■□□□□ 0.58
SNX18-202ENST00000343017 ZNF710Q8N1W2 664 aa18.68■□□□□ 0.58
SNX18-202ENST00000343017 SMARCA5O60264 1052 aaPredicted RBP18.67■□□□□ 0.58
SNX18-202ENST00000343017 GDPD2Q9HCC8 539 aa18.67■□□□□ 0.58
SNX18-202ENST00000343017 MCM5P33992 734 aa18.67■□□□□ 0.58
SNX18-202ENST00000343017 ALDH1L2Q3SY69 923 aa18.67■□□□□ 0.58
SNX18-202ENST00000343017 MTERF4Q7Z6M4 381 aaKnown RBP18.67■□□□□ 0.58
SNX18-202ENST00000343017 MAP3K4Q9Y6R4 1608 aa18.66■□□□□ 0.58
SNX18-202ENST00000343017 MRPL50Q8N5N7 158 aaKnown RBP18.66■□□□□ 0.58
SNX18-202ENST00000343017 KIAA2012Q0VF49 1180 aa18.66■□□□□ 0.58
SNX18-202ENST00000343017 ADGRB2O60241 1585 aa18.65■□□□□ 0.58
SNX18-202ENST00000343017 INO80Q9ULG1 1556 aaPredicted RBP18.65■□□□□ 0.58
SNX18-202ENST00000343017 ARHGAP31Q2M1Z3 1444 aa18.65■□□□□ 0.58
SNX18-202ENST00000343017 VAMP4O75379 141 aa18.65■□□□□ 0.58
SNX18-202ENST00000343017 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
SNX18-202ENST00000343017 TTC22Q5TAA0 569 aa18.65■□□□□ 0.58
SNX18-202ENST00000343017 SBNO2Q9Y2G9 1366 aa18.65■□□□□ 0.58
SNX18-202ENST00000343017 TTC12Q9H892 705 aaPredicted RBP18.65■□□□□ 0.58
SNX18-202ENST00000343017 CWC22Q9HCG8 908 aaKnown RBP18.65■□□□□ 0.58
SNX18-202ENST00000343017 IL16Q14005 1332 aa18.64■□□□□ 0.58
SNX18-202ENST00000343017 YEATS2Q9ULM3 1422 aa18.64■□□□□ 0.58
SNX18-202ENST00000343017 DMTNQ08495 405 aa18.64■□□□□ 0.57
SNX18-202ENST00000343017 KIDINS220Q9ULH0 1771 aa18.64■□□□□ 0.57
SNX18-202ENST00000343017 ST18O60284 1047 aa18.64■□□□□ 0.57
SNX18-202ENST00000343017 SDSP20132 328 aa18.64■□□□□ 0.57
SNX18-202ENST00000343017 ATP2B3Q16720 1220 aa18.64■□□□□ 0.57
SNX18-202ENST00000343017 MYRIPQ8NFW9 859 aa18.64■□□□□ 0.57
SNX18-202ENST00000343017 STK26Q9P289 416 aa18.64■□□□□ 0.57
SNX18-202ENST00000343017 FBXO31Q5XUX0 539 aaPredicted RBP18.63■□□□□ 0.57
SNX18-202ENST00000343017 IGSF3O75054 1194 aa18.63■□□□□ 0.57
SNX18-202ENST00000343017 STAG3Q9UJ98 1225 aa18.63■□□□□ 0.57
SNX18-202ENST00000343017 SPDYE4A6NLX3 237 aa18.62■□□□□ 0.57
SNX18-202ENST00000343017 GADD45BO75293 160 aaPredicted RBP18.62■□□□□ 0.57
SNX18-202ENST00000343017 TSPY26PQ9H489 355 aa18.62■□□□□ 0.57
SNX18-202ENST00000343017 KIAA1210Q9ULL0 1709 aa18.62■□□□□ 0.57
SNX18-202ENST00000343017 HMOX1P09601 288 aa18.62■□□□□ 0.57
SNX18-202ENST00000343017 PRKAR2BP31323 418 aa18.61■□□□□ 0.57
SNX18-202ENST00000343017 INTS3Q68E01 1043 aaKnown RBP18.61■□□□□ 0.57
SNX18-202ENST00000343017 PHACTR3Q96KR7 559 aa18.61■□□□□ 0.57
SNX18-202ENST00000343017 DIAPH1O60610 1272 aaKnown RBP18.61■□□□□ 0.57
SNX18-202ENST00000343017 NEK4P51957 841 aa18.61■□□□□ 0.57
SNX18-202ENST00000343017 PPP4R3BQ5MIZ7 849 aa18.61■□□□□ 0.57
SNX18-202ENST00000343017 USP25Q9UHP3 1055 aa18.61■□□□□ 0.57
SNX18-202ENST00000343017 C14orf93Q9H972 538 aaKnown RBP18.6■□□□□ 0.57
SNX18-202ENST00000343017 NOLC1Q14978 699 aaKnown RBP eCLIP18.6■□□□□ 0.57
SNX18-202ENST00000343017 NPATQ14207 1427 aa18.6■□□□□ 0.57
SNX18-202ENST00000343017 MED14O60244 1454 aa18.59■□□□□ 0.57
SNX18-202ENST00000343017 IDI1Q13907 227 aa18.59■□□□□ 0.57
SNX18-202ENST00000343017 TMX3Q96JJ7 454 aa18.59■□□□□ 0.57
SNX18-202ENST00000343017 ANKRD36BQ8N2N9 1353 aa18.59■□□□□ 0.57
SNX18-202ENST00000343017 MYOM2P54296 1465 aa18.59■□□□□ 0.57
SNX18-202ENST00000343017 FYB1O15117 783 aa18.58■□□□□ 0.57
SNX18-202ENST00000343017 EVC2Q86UK5 1308 aa18.58■□□□□ 0.57
SNX18-202ENST00000343017 SRPK2P78362 688 aaKnown RBP18.58■□□□□ 0.56
SNX18-202ENST00000343017 C8orf58Q8NAV2 365 aa18.58■□□□□ 0.56
SNX18-202ENST00000343017 DCTPP1Q9H773 170 aa18.58■□□□□ 0.56
SNX18-202ENST00000343017 PLCB2Q00722 1185 aa18.57■□□□□ 0.56
SNX18-202ENST00000343017 A0A1W2PP64 1363 aa18.56■□□□□ 0.56
SNX18-202ENST00000343017 TSPOAP1O95153 1857 aa18.56■□□□□ 0.56
SNX18-202ENST00000343017 MBD3O95983 291 aa18.56■□□□□ 0.56
SNX18-202ENST00000343017 MBIPQ9NS73 344 aa18.56■□□□□ 0.56
SNX18-202ENST00000343017 UTP14CQ5TAP6 766 aaKnown RBP18.56■□□□□ 0.56
SNX18-202ENST00000343017 TSHZ3Q63HK5 1081 aa18.56■□□□□ 0.56
SNX18-202ENST00000343017 ABCC4O15439 1325 aa18.55■□□□□ 0.56
SNX18-202ENST00000343017 TET3O43151 1660 aa18.55■□□□□ 0.56
SNX18-202ENST00000343017 TWISTNBQ3B726 338 aaPredicted RBP18.55■□□□□ 0.56
SNX18-202ENST00000343017 PIBF1Q8WXW3 757 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms