RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 IL16Q14005 1332 aa25.99■■□□□ 1.75
RTN1-202ENST00000342503 NUTM2GQ5VZR2 741 aa25.99■■□□□ 1.75
RTN1-202ENST00000342503 ABTB2Q8N961 1025 aa25.99■■□□□ 1.75
RTN1-202ENST00000342503 HSPA2P54652 639 aa25.98■■□□□ 1.75
RTN1-202ENST00000342503 KDM4FA0A1W2PPD8 638 aa25.97■■□□□ 1.75
RTN1-202ENST00000342503 FLT4P35916 1363 aa25.96■■□□□ 1.75
RTN1-202ENST00000342503 FANCIQ9NVI1 1328 aa25.96■■□□□ 1.75
RTN1-202ENST00000342503 PSME1Q06323 249 aa25.95■■□□□ 1.74
RTN1-202ENST00000342503 TSR2Q969E8 191 aaKnown RBP25.95■■□□□ 1.74
RTN1-202ENST00000342503 ORAI2Q96SN7 254 aa25.94■■□□□ 1.74
RTN1-202ENST00000342503 RARSP54136 660 aaKnown RBP25.94■■□□□ 1.74
RTN1-202ENST00000342503 SULT6B1Q6IMI4 303 aa25.94■■□□□ 1.74
RTN1-202ENST00000342503 AEBP1Q8IUX7 1158 aa25.94■■□□□ 1.74
RTN1-202ENST00000342503 AMPHP49418 695 aa25.93■■□□□ 1.74
RTN1-202ENST00000342503 C19orf44Q9H6X5 657 aa25.92■■□□□ 1.74
RTN1-202ENST00000342503 KIF1AQ12756 1690 aa25.91■■□□□ 1.74
RTN1-202ENST00000342503 LTN1O94822 1766 aa25.9■■□□□ 1.74
RTN1-202ENST00000342503 C1orf167Q5SNV9 1468 aa25.9■■□□□ 1.74
RTN1-202ENST00000342503 ARHGEF10O15013 1369 aa25.89■■□□□ 1.74
RTN1-202ENST00000342503 TMEM94Q12767 1356 aa25.89■■□□□ 1.74
RTN1-202ENST00000342503 EXOSC9Q06265 439 aaKnown RBP25.89■■□□□ 1.74
RTN1-202ENST00000342503 LMTK3Q96Q04 1460 aa25.89■■□□□ 1.73
RTN1-202ENST00000342503 KIF24Q5T7B8 1368 aa25.89■■□□□ 1.73
RTN1-202ENST00000342503 STRCQ7RTU9 1775 aa25.88■■□□□ 1.73
RTN1-202ENST00000342503 CT47B1P0C2W7 299 aaPredicted RBP25.88■■□□□ 1.73
RTN1-202ENST00000342503 TRPM3Q9HCF6 1732 aaPredicted RBP25.87■■□□□ 1.73
RTN1-202ENST00000342503 FOXO3O43524 673 aa25.86■■□□□ 1.73
RTN1-202ENST00000342503 HOXC9P31274 260 aa25.86■■□□□ 1.73
RTN1-202ENST00000342503 LMOD3Q0VAK6 560 aa25.86■■□□□ 1.73
RTN1-202ENST00000342503 NCOA3Q9Y6Q9 1424 aa25.86■■□□□ 1.73
RTN1-202ENST00000342503 NFAT5O94916 1531 aa25.86■■□□□ 1.73
RTN1-202ENST00000342503 CANXP27824 592 aaKnown RBP25.85■■□□□ 1.73
RTN1-202ENST00000342503 THUMPD2Q9BTF0 503 aaKnown RBP25.85■■□□□ 1.73
RTN1-202ENST00000342503 CALD1Q05682 793 aaKnown RBP25.85■■□□□ 1.73
RTN1-202ENST00000342503 PDE3AQ14432 1141 aa25.84■■□□□ 1.73
RTN1-202ENST00000342503 XPCQ01831 940 aaPredicted RBP25.83■■□□□ 1.73
RTN1-202ENST00000342503 ATF3P18847 181 aa25.83■■□□□ 1.72
RTN1-202ENST00000342503 FRAT1Q92837 279 aaPredicted RBP25.83■■□□□ 1.72
RTN1-202ENST00000342503 EYA1Q99502 592 aa25.83■■□□□ 1.72
RTN1-202ENST00000342503 BCL2L13Q9BXK5 485 aa25.83■■□□□ 1.72
RTN1-202ENST00000342503 LAS1LQ9Y4W2 734 aaKnown RBP25.83■■□□□ 1.72
RTN1-202ENST00000342503 DCCP43146 1447 aa25.82■■□□□ 1.72
RTN1-202ENST00000342503 MST1RQ04912 1400 aa25.82■■□□□ 1.72
RTN1-202ENST00000342503 RTL1A6NKG5 1358 aa25.82■■□□□ 1.72
RTN1-202ENST00000342503 IGSF1Q8N6C5 1336 aa25.82■■□□□ 1.72
RTN1-202ENST00000342503 XIRP1Q702N8 1843 aaKnown RBP25.81■■□□□ 1.72
RTN1-202ENST00000342503 KDRP35968 1356 aa25.8■■□□□ 1.72
RTN1-202ENST00000342503 IFT57Q9NWB7 429 aa25.8■■□□□ 1.72
RTN1-202ENST00000342503 FAM83GA6ND36 823 aa25.8■■□□□ 1.72
RTN1-202ENST00000342503 KRT28Q7Z3Y7 464 aa25.8■■□□□ 1.72
RTN1-202ENST00000342503 ZNF853P0CG23 659 aa25.79■■□□□ 1.72
RTN1-202ENST00000342503 GNAI1P63096 354 aa25.79■■□□□ 1.72
RTN1-202ENST00000342503 KCNH5Q8NCM2 988 aa25.79■■□□□ 1.72
RTN1-202ENST00000342503 SLIT3O75094 1523 aa25.78■■□□□ 1.72
RTN1-202ENST00000342503 PANK1Q8TE04 598 aa25.78■■□□□ 1.72
RTN1-202ENST00000342503 PHRF1Q9P1Y6 1649 aaKnown RBP25.77■■□□□ 1.72
RTN1-202ENST00000342503 DCTN1Q14203 1278 aa25.77■■□□□ 1.72
RTN1-202ENST00000342503 IP6K1Q92551 441 aa25.76■■□□□ 1.71
RTN1-202ENST00000342503 SSH1Q8WYL5 1049 aa25.75■■□□□ 1.71
RTN1-202ENST00000342503 LTV1Q96GA3 475 aaPredicted RBP25.75■■□□□ 1.71
RTN1-202ENST00000342503 SMC4Q9NTJ3 1288 aa25.75■■□□□ 1.71
RTN1-202ENST00000342503 ALS2Q96Q42 1657 aa25.75■■□□□ 1.71
RTN1-202ENST00000342503 CFAP44Q96MT7 982 aa25.74■■□□□ 1.71
RTN1-202ENST00000342503 MBIPQ9NS73 344 aa25.74■■□□□ 1.71
RTN1-202ENST00000342503 TNNQ9UQP3 1299 aa25.74■■□□□ 1.71
RTN1-202ENST00000342503 COG6Q9Y2V7 657 aa25.74■■□□□ 1.71
RTN1-202ENST00000342503 LMOD2Q6P5Q4 547 aa25.73■■□□□ 1.71
RTN1-202ENST00000342503 CADPS2Q86UW7 1296 aa25.73■■□□□ 1.71
RTN1-202ENST00000342503 MSH6P52701 1360 aa25.72■■□□□ 1.71
RTN1-202ENST00000342503 MTHFSDQ2M296 383 aaKnown RBP25.72■■□□□ 1.71
RTN1-202ENST00000342503 ZBTB7CA1YPR0 619 aa25.71■■□□□ 1.71
RTN1-202ENST00000342503 ZKSCAN2Q63HK3 967 aa25.71■■□□□ 1.71
RTN1-202ENST00000342503 USP19O94966 1318 aa25.71■■□□□ 1.71
RTN1-202ENST00000342503 GCP02774 474 aa25.71■■□□□ 1.71
RTN1-202ENST00000342503 RLBP1P12271 317 aa25.7■■□□□ 1.7
RTN1-202ENST00000342503 ALDH1L2Q3SY69 923 aa25.7■■□□□ 1.7
RTN1-202ENST00000342503 MCM10Q7L590 875 aa25.7■■□□□ 1.7
RTN1-202ENST00000342503 PLEKHG5O94827 1062 aa25.69■■□□□ 1.7
RTN1-202ENST00000342503 RGPD2P0DJD1 1756 aa25.69■■□□□ 1.7
RTN1-202ENST00000342503 KDM2BQ8NHM5 1336 aa25.69■■□□□ 1.7
RTN1-202ENST00000342503 VAMP4O75379 141 aa25.68■■□□□ 1.7
RTN1-202ENST00000342503 GAS2L2Q8NHY3 880 aa25.68■■□□□ 1.7
RTN1-202ENST00000342503 ARHGEF25Q86VW2 580 aa25.67■■□□□ 1.7
RTN1-202ENST00000342503 DDX17Q92841 729 aaKnown RBP25.67■■□□□ 1.7
RTN1-202ENST00000342503 CLUAP1Q96AJ1 413 aa25.67■■□□□ 1.7
RTN1-202ENST00000342503 ZNF428Q96B54 188 aa25.67■■□□□ 1.7
RTN1-202ENST00000342503 RBM19Q9Y4C8 960 aaKnown RBP25.67■■□□□ 1.7
RTN1-202ENST00000342503 TSPYL6Q8N831 410 aa25.66■■□□□ 1.7
RTN1-202ENST00000342503 NOB1Q9ULX3 412 aaKnown RBP25.66■■□□□ 1.7
RTN1-202ENST00000342503 CENPQQ7L2Z9 268 aaPredicted RBP25.66■■□□□ 1.7
RTN1-202ENST00000342503 CRB1P82279 1406 aa25.65■■□□□ 1.7
RTN1-202ENST00000342503 MED1Q15648 1581 aaPredicted RBP25.65■■□□□ 1.7
RTN1-202ENST00000342503 MS4A1P11836 297 aa25.65■■□□□ 1.7
RTN1-202ENST00000342503 DZIP1LQ8IYY4 767 aaKnown RBP25.65■■□□□ 1.7
RTN1-202ENST00000342503 USHBP1Q8N6Y0 703 aa25.65■■□□□ 1.7
RTN1-202ENST00000342503 ZNF335Q9H4Z2 1342 aaPredicted RBP25.64■■□□□ 1.7
RTN1-202ENST00000342503 CHL1O00533 1208 aa25.63■■□□□ 1.69
RTN1-202ENST00000342503 C8orf58Q8NAV2 365 aa25.63■■□□□ 1.69
RTN1-202ENST00000342503 RTF1Q92541 710 aaKnown RBP25.63■■□□□ 1.69
RTN1-202ENST00000342503 NPHP3Q7Z494 1330 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 332.5 ms