RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TROQ12816 1431 aaPredicted RBP17.88■□□□□ 0.45
UBE3B-202ENST00000342494 KIAA1107Q9UPP5 1409 aa17.88■□□□□ 0.45
UBE3B-202ENST00000342494 MNS1Q8NEH6 495 aa17.87■□□□□ 0.45
UBE3B-202ENST00000342494 RAI14Q9P0K7 980 aa17.87■□□□□ 0.45
UBE3B-202ENST00000342494 SYCP1Q15431 976 aa17.87■□□□□ 0.45
UBE3B-202ENST00000342494 NUP133Q8WUM0 1156 aa17.87■□□□□ 0.45
UBE3B-202ENST00000342494 NUDT16Q96DE0 195 aaKnown RBP17.86■□□□□ 0.45
UBE3B-202ENST00000342494 PDZRN3Q9UPQ7 1066 aa17.86■□□□□ 0.45
UBE3B-202ENST00000342494 SNAPC4Q5SXM2 1469 aa17.86■□□□□ 0.45
UBE3B-202ENST00000342494 TMOD2Q9NZR1 351 aa17.86■□□□□ 0.45
UBE3B-202ENST00000342494 ANKRD30BQ9BXX2 1392 aa17.86■□□□□ 0.45
UBE3B-202ENST00000342494 CCDC61Q9Y6R9 512 aa17.86■□□□□ 0.45
UBE3B-202ENST00000342494 FILIP1LQ4L180 1135 aa17.85■□□□□ 0.45
UBE3B-202ENST00000342494 CYP46A1Q9Y6A2 500 aa17.85■□□□□ 0.45
UBE3B-202ENST00000342494 AACSQ86V21 672 aa17.85■□□□□ 0.45
UBE3B-202ENST00000342494 JMYQ8N9B5 988 aa17.85■□□□□ 0.45
UBE3B-202ENST00000342494 SRGAP3O43295 1099 aa17.85■□□□□ 0.45
UBE3B-202ENST00000342494 TDO2P48775 406 aa17.85■□□□□ 0.45
UBE3B-202ENST00000342494 ZHX3Q9H4I2 956 aa17.85■□□□□ 0.45
UBE3B-202ENST00000342494 PDE3AQ14432 1141 aa17.84■□□□□ 0.45
UBE3B-202ENST00000342494 CCDC85AQ96PX6 553 aaPredicted RBP17.84■□□□□ 0.45
UBE3B-202ENST00000342494 LRP2BPQ9P2M1 347 aa17.84■□□□□ 0.45
UBE3B-202ENST00000342494 CEBPZQ03701 1054 aaKnown RBP17.84■□□□□ 0.45
UBE3B-202ENST00000342494 ZNF652Q9Y2D9 606 aa17.84■□□□□ 0.45
UBE3B-202ENST00000342494 RABEP1Q15276 862 aa17.83■□□□□ 0.45
UBE3B-202ENST00000342494 CAGE1Q8TC20 777 aa17.83■□□□□ 0.45
UBE3B-202ENST00000342494 FMNL2Q96PY5 1086 aa17.83■□□□□ 0.45
UBE3B-202ENST00000342494 PIP4K2AP48426 406 aaPredicted RBP17.83■□□□□ 0.45
UBE3B-202ENST00000342494 AK7Q96M32 723 aa17.83■□□□□ 0.45
UBE3B-202ENST00000342494 TMOD3Q9NYL9 352 aa17.83■□□□□ 0.45
UBE3B-202ENST00000342494 MAP4K4O95819 1239 aaPredicted RBP17.83■□□□□ 0.44
UBE3B-202ENST00000342494 MPHOSPH10O00566 681 aaKnown RBP17.83■□□□□ 0.44
UBE3B-202ENST00000342494 ZPR1O75312 459 aa17.83■□□□□ 0.44
UBE3B-202ENST00000342494 STK3Q13188 491 aa17.83■□□□□ 0.44
UBE3B-202ENST00000342494 ANKRD1Q15327 319 aa17.83■□□□□ 0.44
UBE3B-202ENST00000342494 TTLL5Q6EMB2 1281 aa17.83■□□□□ 0.44
UBE3B-202ENST00000342494 PTCD1O75127 700 aaKnown RBP17.83■□□□□ 0.44
UBE3B-202ENST00000342494 WDR63Q8IWG1 891 aa17.83■□□□□ 0.44
UBE3B-202ENST00000342494 PDCL3Q9H2J4 239 aa17.83■□□□□ 0.44
UBE3B-202ENST00000342494 GNAT3A8MTJ3 354 aa17.82■□□□□ 0.44
UBE3B-202ENST00000342494 ADAMTS2O95450 1211 aa17.82■□□□□ 0.44
UBE3B-202ENST00000342494 CT47B1P0C2W7 299 aaPredicted RBP17.82■□□□□ 0.44
UBE3B-202ENST00000342494 BRPF1P55201 1214 aaPredicted RBP17.82■□□□□ 0.44
UBE3B-202ENST00000342494 UBAC1Q9BSL1 405 aa17.82■□□□□ 0.44
UBE3B-202ENST00000342494 EHBP1L1Q8N3D4 1523 aa17.81■□□□□ 0.44
UBE3B-202ENST00000342494 SMC2O95347 1197 aa17.81■□□□□ 0.44
UBE3B-202ENST00000342494 SMARCE1Q969G3 411 aa17.81■□□□□ 0.44
UBE3B-202ENST00000342494 FCHSD2O94868 740 aa17.81■□□□□ 0.44
UBE3B-202ENST00000342494 SPINK5Q9NQ38 1064 aaPredicted RBP17.81■□□□□ 0.44
UBE3B-202ENST00000342494 ACBD3Q9H3P7 528 aa17.81■□□□□ 0.44
UBE3B-202ENST00000342494 ARGLU1Q9NWB6 273 aaPredicted RBP17.81■□□□□ 0.44
UBE3B-202ENST00000342494 FIBPO43427 364 aa17.8■□□□□ 0.44
UBE3B-202ENST00000342494 BCAR3O75815 825 aa17.8■□□□□ 0.44
UBE3B-202ENST00000342494 ATF7IPQ6VMQ6 1270 aa17.8■□□□□ 0.44
UBE3B-202ENST00000342494 LETM1O95202 739 aaPredicted RBP17.8■□□□□ 0.44
UBE3B-202ENST00000342494 TRIM5Q9C035 493 aa17.8■□□□□ 0.44
UBE3B-202ENST00000342494 CTNNA3Q9UI47 895 aa17.8■□□□□ 0.44
UBE3B-202ENST00000342494 RNF214Q8ND24 703 aa17.8■□□□□ 0.44
UBE3B-202ENST00000342494 IDH1O75874 414 aaKnown RBP17.8■□□□□ 0.44
UBE3B-202ENST00000342494 ABCF2Q9UG63 623 aa17.79■□□□□ 0.44
UBE3B-202ENST00000342494 NOL7Q9UMY1 257 aaKnown RBP17.79■□□□□ 0.44
UBE3B-202ENST00000342494 TEX35Q5T0J7 233 aa17.79■□□□□ 0.44
UBE3B-202ENST00000342494 MBD3O95983 291 aa17.79■□□□□ 0.44
UBE3B-202ENST00000342494 ERICH3Q5RHP9 1530 aa17.79■□□□□ 0.44
UBE3B-202ENST00000342494 MYO6Q9UM54 1294 aa17.78■□□□□ 0.44
UBE3B-202ENST00000342494 EFCAB5A4FU69 1503 aa17.78■□□□□ 0.44
UBE3B-202ENST00000342494 STIM1Q13586 685 aa17.78■□□□□ 0.44
UBE3B-202ENST00000342494 METTL24Q5JXM2 366 aa17.78■□□□□ 0.44
UBE3B-202ENST00000342494 NGLY1Q96IV0 654 aa17.78■□□□□ 0.44
UBE3B-202ENST00000342494 ZNF76P36508 570 aa17.77■□□□□ 0.44
UBE3B-202ENST00000342494 CDKL5O76039 1030 aa17.77■□□□□ 0.44
UBE3B-202ENST00000342494 HSP90AA2PQ14568 343 aaPredicted RBP17.77■□□□□ 0.44
UBE3B-202ENST00000342494 WAPLQ7Z5K2 1190 aa17.77■□□□□ 0.44
UBE3B-202ENST00000342494 ARAP1Q96P48 1450 aa17.77■□□□□ 0.44
UBE3B-202ENST00000342494 NFE2L2Q16236 605 aa17.77■□□□□ 0.43
UBE3B-202ENST00000342494 NBPF8Q3BBV2 869 aa17.77■□□□□ 0.43
UBE3B-202ENST00000342494 HSP90B2PQ58FF3 399 aa17.77■□□□□ 0.43
UBE3B-202ENST00000342494 AIDAQ96BJ3 306 aa17.77■□□□□ 0.43
UBE3B-202ENST00000342494 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
UBE3B-202ENST00000342494 SSBP05455 408 aaKnown RBP eCLIP17.76■□□□□ 0.43
UBE3B-202ENST00000342494 BLOC1S2Q6QNY1 142 aa17.76■□□□□ 0.43
UBE3B-202ENST00000342494 AEBP1Q8IUX7 1158 aa17.76■□□□□ 0.43
UBE3B-202ENST00000342494 IL1RAPL2Q9NP60 686 aa17.76■□□□□ 0.43
UBE3B-202ENST00000342494 ME1P48163 572 aa17.76■□□□□ 0.43
UBE3B-202ENST00000342494 WDHD1O75717 1129 aaPredicted RBP17.75■□□□□ 0.43
UBE3B-202ENST00000342494 BMP2KQ9NSY1 1161 aaPredicted RBP17.75■□□□□ 0.43
UBE3B-202ENST00000342494 ZNHIT6Q9NWK9 470 aaKnown RBP17.75■□□□□ 0.43
UBE3B-202ENST00000342494 CAVIN1Q6NZI2 390 aaKnown RBP17.75■□□□□ 0.43
UBE3B-202ENST00000342494 CAVIN4Q5BKX8 364 aa17.75■□□□□ 0.43
UBE3B-202ENST00000342494 CD109Q6YHK3 1445 aa17.75■□□□□ 0.43
UBE3B-202ENST00000342494 PRPF40AO75400 957 aaKnown RBP17.75■□□□□ 0.43
UBE3B-202ENST00000342494 USP5P45974 858 aa17.75■□□□□ 0.43
UBE3B-202ENST00000342494 TANGO6Q9C0B7 1094 aa17.75■□□□□ 0.43
UBE3B-202ENST00000342494 FAM13BQ9NYF5 915 aa17.75■□□□□ 0.43
UBE3B-202ENST00000342494 FOXO3O43524 673 aa17.74■□□□□ 0.43
UBE3B-202ENST00000342494 MVPQ14764 893 aaKnown RBP17.74■□□□□ 0.43
UBE3B-202ENST00000342494 HECW1Q76N89 1606 aa17.74■□□□□ 0.43
UBE3B-202ENST00000342494 MPRIPQ6WCQ1 1025 aa17.74■□□□□ 0.43
UBE3B-202ENST00000342494 PHF8Q9UPP1 1060 aa17.74■□□□□ 0.43
UBE3B-202ENST00000342494 CRACR2BQ8N4Y2 399 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms