RNA–Protein interactions for RNA: ENST00000342404.7

CCDC83-202, Transcript of coiled-coil domain containing 83, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC83, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83-202ENST00000342404 LRRC59Q96AG4 307 aaKnown RBP11.52□□□□□ -0.56
CCDC83-202ENST00000342404 PHRF1Q9P1Y6 1649 aaKnown RBP11.52□□□□□ -0.57
CCDC83-202ENST00000342404 SLIT3O75094 1523 aa11.52□□□□□ -0.57
CCDC83-202ENST00000342404 PNPLA6Q8IY17 1366 aa11.52□□□□□ -0.57
CCDC83-202ENST00000342404 AHDC1Q5TGY3 1603 aaPredicted RBP11.51□□□□□ -0.57
CCDC83-202ENST00000342404 IQSEC2Q5JU85 1478 aa11.51□□□□□ -0.57
CCDC83-202ENST00000342404 HOXC9P31274 260 aa11.51□□□□□ -0.57
CCDC83-202ENST00000342404 HMOX1P09601 288 aa11.5□□□□□ -0.57
CCDC83-202ENST00000342404 EIF4A2Q14240 407 aaKnown RBP11.5□□□□□ -0.57
CCDC83-202ENST00000342404 CHRNA2Q15822 529 aa11.5□□□□□ -0.57
CCDC83-202ENST00000342404 ARHGEF25Q86VW2 580 aa11.5□□□□□ -0.57
CCDC83-202ENST00000342404 KIAA0232Q92628 1395 aa11.49□□□□□ -0.57
CCDC83-202ENST00000342404 IL13P35225 146 aa11.49□□□□□ -0.57
CCDC83-202ENST00000342404 CRYBG1Q9Y4K1 1723 aa11.49□□□□□ -0.57
CCDC83-202ENST00000342404 PRDM11Q9NQV5 511 aa11.48□□□□□ -0.57
CCDC83-202ENST00000342404 COL16A1Q07092 1604 aaPredicted RBP11.48□□□□□ -0.57
CCDC83-202ENST00000342404 IP6K1Q92551 441 aa11.48□□□□□ -0.57
CCDC83-202ENST00000342404 RTL1A6NKG5 1358 aa11.48□□□□□ -0.57
CCDC83-202ENST00000342404 INSRP06213 1382 aa11.48□□□□□ -0.57
CCDC83-202ENST00000342404 RGPD5Q99666 1765 aa11.47□□□□□ -0.57
CCDC83-202ENST00000342404 NEUROD2Q15784 382 aa11.47□□□□□ -0.57
CCDC83-202ENST00000342404 AXIN2Q9Y2T1 843 aa11.47□□□□□ -0.57
CCDC83-202ENST00000342404 BLMP54132 1417 aaPredicted RBP11.47□□□□□ -0.57
CCDC83-202ENST00000342404 ABCA3Q99758 1704 aa11.47□□□□□ -0.57
CCDC83-202ENST00000342404 KIF24Q5T7B8 1368 aa11.47□□□□□ -0.57
CCDC83-202ENST00000342404 SULT6B1Q6IMI4 303 aa11.47□□□□□ -0.57
CCDC83-202ENST00000342404 AEBP1Q8IUX7 1158 aa11.47□□□□□ -0.57
CCDC83-202ENST00000342404 MAPK8IP3Q9UPT6 1336 aa11.46□□□□□ -0.57
CCDC83-202ENST00000342404 NUTM2BA6NNL0 878 aaPredicted RBP11.46□□□□□ -0.58
CCDC83-202ENST00000342404 NUTM2EB1AL46 878 aaPredicted RBP11.46□□□□□ -0.58
CCDC83-202ENST00000342404 APAF1O14727 1248 aa11.46□□□□□ -0.58
CCDC83-202ENST00000342404 NUTM2AQ8IVF1 878 aaPredicted RBP11.46□□□□□ -0.58
CCDC83-202ENST00000342404 USHBP1Q8N6Y0 703 aa11.46□□□□□ -0.58
CCDC83-202ENST00000342404 RRP7AQ9Y3A4 280 aaKnown RBP11.46□□□□□ -0.58
CCDC83-202ENST00000342404 ADAMTS2O95450 1211 aa11.45□□□□□ -0.58
CCDC83-202ENST00000342404 CENPBP07199 599 aaPredicted RBP11.45□□□□□ -0.58
CCDC83-202ENST00000342404 PRKAR2BP31323 418 aa11.45□□□□□ -0.58
CCDC83-202ENST00000342404 NEFMP07197 916 aa11.45□□□□□ -0.58
CCDC83-202ENST00000342404 CSB-PGBD3P0DP91 1061 aa11.45□□□□□ -0.58
CCDC83-202ENST00000342404 ANKRD24Q8TF21 1146 aa11.45□□□□□ -0.58
CCDC83-202ENST00000342404 RUNDC1Q96C34 613 aa11.45□□□□□ -0.58
CCDC83-202ENST00000342404 RGPD2P0DJD1 1756 aa11.44□□□□□ -0.58
CCDC83-202ENST00000342404 EYA1Q99502 592 aa11.44□□□□□ -0.58
CCDC83-202ENST00000342404 RSPH6AQ9H0K4 717 aa11.44□□□□□ -0.58
CCDC83-202ENST00000342404 ZBED9Q6R2W3 1325 aa11.44□□□□□ -0.58
CCDC83-202ENST00000342404 FCHSD2O94868 740 aa11.43□□□□□ -0.58
CCDC83-202ENST00000342404 HSPA1LP34931 641 aa11.43□□□□□ -0.58
CCDC83-202ENST00000342404 TCP11L2Q8N4U5 519 aa11.43□□□□□ -0.58
CCDC83-202ENST00000342404 ERBB3P21860 1342 aa11.43□□□□□ -0.58
CCDC83-202ENST00000342404 CPDO75976 1380 aa11.43□□□□□ -0.58
CCDC83-202ENST00000342404 STRN4Q9NRL3 753 aa11.43□□□□□ -0.58
CCDC83-202ENST00000342404 NBPF6Q5VWK0 638 aa11.42□□□□□ -0.58
CCDC83-202ENST00000342404 NBPF4Q96M43 638 aa11.42□□□□□ -0.58
CCDC83-202ENST00000342404 PNNQ9H307 717 aaKnown RBP11.42□□□□□ -0.58
CCDC83-202ENST00000342404 NLRP2Q9NX02 1062 aa11.42□□□□□ -0.58
CCDC83-202ENST00000342404 RGPD1P0DJD0 1748 aa11.42□□□□□ -0.58
CCDC83-202ENST00000342404 COL22A1Q8NFW1 1626 aaPredicted RBP11.42□□□□□ -0.58
CCDC83-202ENST00000342404 FAM83GA6ND36 823 aa11.41□□□□□ -0.58
CCDC83-202ENST00000342404 PHACTR3Q96KR7 559 aa11.41□□□□□ -0.58
CCDC83-202ENST00000342404 PLEKHF1Q96S99 279 aa11.41□□□□□ -0.58
CCDC83-202ENST00000342404 IGSF1Q8N6C5 1336 aa11.41□□□□□ -0.58
CCDC83-202ENST00000342404 COL18A1P39060 1754 aa11.41□□□□□ -0.58
CCDC83-202ENST00000342404 BTG4Q9NY30 223 aa11.41□□□□□ -0.58
CCDC83-202ENST00000342404 JCADQ9P266 1359 aa11.4□□□□□ -0.58
CCDC83-202ENST00000342404 EVA1CP58658 441 aa11.4□□□□□ -0.58
CCDC83-202ENST00000342404 CAMTA1Q9Y6Y1 1673 aa11.4□□□□□ -0.58
CCDC83-202ENST00000342404 TOM1L2Q6ZVM7 507 aa11.39□□□□□ -0.59
CCDC83-202ENST00000342404 USP35Q9P2H5 1018 aa11.39□□□□□ -0.59
CCDC83-202ENST00000342404 COL5A2P05997 1499 aaPredicted RBP11.38□□□□□ -0.59
CCDC83-202ENST00000342404 TMPOP42166 694 aaKnown RBP11.38□□□□□ -0.59
CCDC83-202ENST00000342404 RIPK4P57078 832 aa11.38□□□□□ -0.59
CCDC83-202ENST00000342404 LMO7Q8WWI1 1683 aa11.38□□□□□ -0.59
CCDC83-202ENST00000342404 KDRP35968 1356 aa11.38□□□□□ -0.59
CCDC83-202ENST00000342404 C8orf37Q96NL8 207 aa11.37□□□□□ -0.59
CCDC83-202ENST00000342404 ABCC6O95255 1503 aa11.37□□□□□ -0.59
CCDC83-202ENST00000342404 LARP1Q6PKG0 1096 aaKnown RBP11.37□□□□□ -0.59
CCDC83-202ENST00000342404 CDCA7LQ96GN5 454 aa11.37□□□□□ -0.59
CCDC83-202ENST00000342404 WWC1Q8IX03 1113 aa11.36□□□□□ -0.59
CCDC83-202ENST00000342404 WDR17Q8IZU2 1322 aa11.36□□□□□ -0.59
CCDC83-202ENST00000342404 COL14A1Q05707 1796 aaKnown RBP11.36□□□□□ -0.59
CCDC83-202ENST00000342404 DLG5Q8TDM6 1919 aa11.36□□□□□ -0.59
CCDC83-202ENST00000342404 NFE2L2Q16236 605 aa11.36□□□□□ -0.59
CCDC83-202ENST00000342404 MEX3CQ5U5Q3 659 aaKnown RBP11.36□□□□□ -0.59
CCDC83-202ENST00000342404 RAPGEF4Q8WZA2 1011 aa11.36□□□□□ -0.59
CCDC83-202ENST00000342404 PLCH1Q4KWH8 1693 aa11.35□□□□□ -0.59
CCDC83-202ENST00000342404 FAM208AQ9UK61 1670 aaKnown RBP11.35□□□□□ -0.59
CCDC83-202ENST00000342404 MTHFSDQ2M296 383 aaKnown RBP11.35□□□□□ -0.59
CCDC83-202ENST00000342404 NGLY1Q96IV0 654 aa11.35□□□□□ -0.59
CCDC83-202ENST00000342404 SPATA31A6Q5VVP1 1343 aa11.34□□□□□ -0.59
CCDC83-202ENST00000342404 GOLGA2Q08379 1002 aa11.34□□□□□ -0.59
CCDC83-202ENST00000342404 DCTN1Q14203 1278 aa11.34□□□□□ -0.59
CCDC83-202ENST00000342404 THUMPD2Q9BTF0 503 aaKnown RBP11.34□□□□□ -0.59
CCDC83-202ENST00000342404 CCDC9Q9Y3X0 531 aaKnown RBP11.34□□□□□ -0.59
CCDC83-202ENST00000342404 LRP6O75581 1613 aa11.33□□□□□ -0.6
CCDC83-202ENST00000342404 TRIM35Q9UPQ4 493 aa11.33□□□□□ -0.6
CCDC83-202ENST00000342404 ZNF521Q96K83 1311 aa11.32□□□□□ -0.6
CCDC83-202ENST00000342404 MEGF6O75095 1541 aa11.32□□□□□ -0.6
CCDC83-202ENST00000342404 MCM10Q7L590 875 aa11.32□□□□□ -0.6
CCDC83-202ENST00000342404 NGEFQ8N5V2 710 aa11.32□□□□□ -0.6
CCDC83-202ENST00000342404 GAS2L2Q8NHY3 880 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms