RNA–Protein interactions for RNA: ENST00000342022.8

CCDC30-202, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-202ENST00000342022 RGPD8O14715 1765 aaPredicted RBP10.14□□□□□ -0.79
CCDC30-202ENST00000342022 EXOSC9Q06265 439 aaKnown RBP10.13□□□□□ -0.79
CCDC30-202ENST00000342022 USP6P35125 1406 aa10.13□□□□□ -0.79
CCDC30-202ENST00000342022 RSPH6AQ9H0K4 717 aa10.13□□□□□ -0.79
CCDC30-202ENST00000342022 COG6Q9Y2V7 657 aa10.13□□□□□ -0.79
CCDC30-202ENST00000342022 ZC3H6P61129 1189 aaKnown RBP10.13□□□□□ -0.79
CCDC30-202ENST00000342022 MCM10Q7L590 875 aa10.13□□□□□ -0.79
CCDC30-202ENST00000342022 MAP2P11137 1827 aaKnown RBP10.12□□□□□ -0.79
CCDC30-202ENST00000342022 ATF3P18847 181 aa10.11□□□□□ -0.79
CCDC30-202ENST00000342022 ADAMTSL3P82987 1691 aa10.11□□□□□ -0.79
CCDC30-202ENST00000342022 FCHSD2O94868 740 aa10.11□□□□□ -0.79
CCDC30-202ENST00000342022 KRT24Q2M2I5 525 aa10.11□□□□□ -0.79
CCDC30-202ENST00000342022 DIP2AQ14689 1571 aa10.1□□□□□ -0.79
CCDC30-202ENST00000342022 RNF123Q5XPI4 1314 aa10.1□□□□□ -0.79
CCDC30-202ENST00000342022 ZNF335Q9H4Z2 1342 aaPredicted RBP10.1□□□□□ -0.79
CCDC30-202ENST00000342022 FANCIQ9NVI1 1328 aa10.1□□□□□ -0.79
CCDC30-202ENST00000342022 SHPRHQ149N8 1683 aa10.1□□□□□ -0.79
CCDC30-202ENST00000342022 LRRC59Q96AG4 307 aaKnown RBP10.1□□□□□ -0.79
CCDC30-202ENST00000342022 CDC42BPGQ6DT37 1551 aa10.09□□□□□ -0.79
CCDC30-202ENST00000342022 TMEM94Q12767 1356 aa10.09□□□□□ -0.79
CCDC30-202ENST00000342022 SMC4Q9NTJ3 1288 aa10.09□□□□□ -0.79
CCDC30-202ENST00000342022 TSPYL6Q8N831 410 aa10.08□□□□□ -0.8
CCDC30-202ENST00000342022 EYA1Q99502 592 aa10.08□□□□□ -0.8
CCDC30-202ENST00000342022 PTCH1Q13635 1447 aa10.08□□□□□ -0.8
CCDC30-202ENST00000342022 KRT28Q7Z3Y7 464 aa10.08□□□□□ -0.8
CCDC30-202ENST00000342022 NECTIN2Q92692 538 aa10.08□□□□□ -0.8
CCDC30-202ENST00000342022 MYH16Q9H6N6 1097 aa10.08□□□□□ -0.8
CCDC30-202ENST00000342022 RLBP1P12271 317 aa10.08□□□□□ -0.8
CCDC30-202ENST00000342022 RARSP54136 660 aaKnown RBP10.08□□□□□ -0.8
CCDC30-202ENST00000342022 TRMT2AQ8IZ69 625 aaKnown RBP10.08□□□□□ -0.8
CCDC30-202ENST00000342022 C19orf44Q9H6X5 657 aa10.08□□□□□ -0.8
CCDC30-202ENST00000342022 CHRNA2Q15822 529 aa10.07□□□□□ -0.8
CCDC30-202ENST00000342022 NFE2L2Q16236 605 aa10.07□□□□□ -0.8
CCDC30-202ENST00000342022 PNPLA6Q8IY17 1366 aa10.07□□□□□ -0.8
CCDC30-202ENST00000342022 WDR63Q8IWG1 891 aa10.07□□□□□ -0.8
CCDC30-202ENST00000342022 COL3A1P02461 1466 aaPredicted RBP10.06□□□□□ -0.8
CCDC30-202ENST00000342022 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.06□□□□□ -0.8
CCDC30-202ENST00000342022 SSH1Q8WYL5 1049 aa10.06□□□□□ -0.8
CCDC30-202ENST00000342022 HOXC9P31274 260 aa10.06□□□□□ -0.8
CCDC30-202ENST00000342022 INSRP06213 1382 aa10.06□□□□□ -0.8
CCDC30-202ENST00000342022 KIF20BQ96Q89 1820 aa10.06□□□□□ -0.8
CCDC30-202ENST00000342022 USP32Q8NFA0 1604 aa10.06□□□□□ -0.8
CCDC30-202ENST00000342022 RGS3P49796 1198 aa10.05□□□□□ -0.8
CCDC30-202ENST00000342022 MTHFSDQ2M296 383 aaKnown RBP10.05□□□□□ -0.8
CCDC30-202ENST00000342022 SLC4A2P04920 1241 aa10.05□□□□□ -0.8
CCDC30-202ENST00000342022 PNNQ9H307 717 aaKnown RBP10.05□□□□□ -0.8
CCDC30-202ENST00000342022 GCP02774 474 aa10.05□□□□□ -0.8
CCDC30-202ENST00000342022 FTSJ3Q8IY81 847 aaKnown RBP10.05□□□□□ -0.8
CCDC30-202ENST00000342022 MBIPQ9NS73 344 aa10.05□□□□□ -0.8
CCDC30-202ENST00000342022 TTC21AQ8NDW8 1320 aa10.05□□□□□ -0.8
CCDC30-202ENST00000342022 LRRC7Q96NW7 1537 aa10.05□□□□□ -0.8
CCDC30-202ENST00000342022 KNDC1Q76NI1 1749 aa10.05□□□□□ -0.8
CCDC30-202ENST00000342022 PIK3R4Q99570 1358 aa10.04□□□□□ -0.8
CCDC30-202ENST00000342022 PAXIP1Q6ZW49 1069 aaPredicted RBP10.04□□□□□ -0.8
CCDC30-202ENST00000342022 RBM19Q9Y4C8 960 aaKnown RBP10.04□□□□□ -0.8
CCDC30-202ENST00000342022 ITSN1Q15811 1721 aa10.04□□□□□ -0.8
CCDC30-202ENST00000342022 OVOS2A0A0J9YW53 1432 aa10.04□□□□□ -0.8
CCDC30-202ENST00000342022 OVOS2Q6IE36 1432 aa10.04□□□□□ -0.8
CCDC30-202ENST00000342022 C8orf58Q8NAV2 365 aa10.04□□□□□ -0.8
CCDC30-202ENST00000342022 NOB1Q9ULX3 412 aaKnown RBP10.04□□□□□ -0.8
CCDC30-202ENST00000342022 NBPF6Q5VWK0 638 aa10.03□□□□□ -0.8
CCDC30-202ENST00000342022 ZNF428Q96B54 188 aa10.03□□□□□ -0.8
CCDC30-202ENST00000342022 NBPF4Q96M43 638 aa10.03□□□□□ -0.8
CCDC30-202ENST00000342022 AXIN2Q9Y2T1 843 aa10.03□□□□□ -0.8
CCDC30-202ENST00000342022 ADGRL3Q9HAR2 1447 aa10.03□□□□□ -0.8
CCDC30-202ENST00000342022 ERICH6BQ5W0A0 696 aa10.03□□□□□ -0.8
CCDC30-202ENST00000342022 CFAP44Q96MT7 982 aa10.03□□□□□ -0.8
CCDC30-202ENST00000342022 IQSEC2Q5JU85 1478 aa10.03□□□□□ -0.8
CCDC30-202ENST00000342022 AATKQ6ZMQ8 1374 aa10.03□□□□□ -0.8
CCDC30-202ENST00000342022 ITPRIPQ8IWB1 547 aa10.03□□□□□ -0.8
CCDC30-202ENST00000342022 RTF1Q92541 710 aaKnown RBP10.03□□□□□ -0.8
CCDC30-202ENST00000342022 CCDC27Q2M243 656 aa10.02□□□□□ -0.81
CCDC30-202ENST00000342022 USP35Q9P2H5 1018 aa10.02□□□□□ -0.81
CCDC30-202ENST00000342022 FLT4P35916 1363 aa10.02□□□□□ -0.81
CCDC30-202ENST00000342022 NALCNQ8IZF0 1738 aa10.02□□□□□ -0.81
CCDC30-202ENST00000342022 XRN1Q8IZH2 1706 aaKnown RBP10.02□□□□□ -0.81
CCDC30-202ENST00000342022 CSB-PGBD3P0DP91 1061 aa10.02□□□□□ -0.81
CCDC30-202ENST00000342022 SSH2Q76I76 1423 aa10.02□□□□□ -0.81
CCDC30-202ENST00000342022 NLRP2Q9NX02 1062 aa10.01□□□□□ -0.81
CCDC30-202ENST00000342022 CHD2O14647 1828 aaKnown RBP10.01□□□□□ -0.81
CCDC30-202ENST00000342022 TWISTNBQ3B726 338 aaPredicted RBP10.01□□□□□ -0.81
CCDC30-202ENST00000342022 NGEFQ8N5V2 710 aa10.01□□□□□ -0.81
CCDC30-202ENST00000342022 CDK12Q9NYV4 1490 aaPredicted RBP10□□□□□ -0.81
CCDC30-202ENST00000342022 MON2Q7Z3U7 1717 aa10□□□□□ -0.81
CCDC30-202ENST00000342022 IGHDP01880 384 aa10□□□□□ -0.81
CCDC30-202ENST00000342022 TRIM27P14373 513 aa10□□□□□ -0.81
CCDC30-202ENST00000342022 C1orf115Q9H7X2 142 aa10□□□□□ -0.81
CCDC30-202ENST00000342022 MPRIPQ6WCQ1 1025 aa10□□□□□ -0.81
CCDC30-202ENST00000342022 SBNO1A3KN83 1393 aa10□□□□□ -0.81
CCDC30-202ENST00000342022 CADPS2Q86UW7 1296 aa9.99□□□□□ -0.81
CCDC30-202ENST00000342022 ADGRB2O60241 1585 aa9.99□□□□□ -0.81
CCDC30-202ENST00000342022 AKAP12Q02952 1782 aa9.99□□□□□ -0.81
CCDC30-202ENST00000342022 USP31Q70CQ4 1352 aa9.99□□□□□ -0.81
CCDC30-202ENST00000342022 GNAI1P63096 354 aa9.99□□□□□ -0.81
CCDC30-202ENST00000342022 ZKSCAN2Q63HK3 967 aa9.99□□□□□ -0.81
CCDC30-202ENST00000342022 TSPYL4Q9UJ04 414 aa9.99□□□□□ -0.81
CCDC30-202ENST00000342022 ANKRD26Q9UPS8 1709 aa9.98□□□□□ -0.81
CCDC30-202ENST00000342022 DZIP1LQ8IYY4 767 aaKnown RBP9.98□□□□□ -0.81
CCDC30-202ENST00000342022 ANKRD24Q8TF21 1146 aa9.98□□□□□ -0.81
CCDC30-202ENST00000342022 LGR6Q9HBX8 967 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms