RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 ASXL2Q76L83 1435 aa19.97■□□□□ 0.79
SCARB1-202ENST00000339570 PRPF40AO75400 957 aaKnown RBP19.96■□□□□ 0.79
SCARB1-202ENST00000339570 BAG4O95429 457 aaKnown RBP19.96■□□□□ 0.79
SCARB1-202ENST00000339570 DTNBO60941 627 aa19.96■□□□□ 0.79
SCARB1-202ENST00000339570 NFE2L2Q16236 605 aa19.96■□□□□ 0.79
SCARB1-202ENST00000339570 FCHSD2O94868 740 aa19.96■□□□□ 0.79
SCARB1-202ENST00000339570 RNF214Q8ND24 703 aa19.96■□□□□ 0.79
SCARB1-202ENST00000339570 SNX21Q969T3 373 aa19.96■□□□□ 0.79
SCARB1-202ENST00000339570 MCM10Q7L590 875 aa19.95■□□□□ 0.78
SCARB1-202ENST00000339570 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
SCARB1-202ENST00000339570 GCC1Q96CN9 775 aa19.95■□□□□ 0.78
SCARB1-202ENST00000339570 ALDH1L2Q3SY69 923 aa19.94■□□□□ 0.78
SCARB1-202ENST00000339570 AEBP1Q8IUX7 1158 aa19.94■□□□□ 0.78
SCARB1-202ENST00000339570 CALD1Q05682 793 aaKnown RBP19.94■□□□□ 0.78
SCARB1-202ENST00000339570 MROH1Q8NDA8 1641 aa19.93■□□□□ 0.78
SCARB1-202ENST00000339570 PLEKHM2Q8IWE5 1019 aa19.93■□□□□ 0.78
SCARB1-202ENST00000339570 GNAI1P63096 354 aa19.92■□□□□ 0.78
SCARB1-202ENST00000339570 DDIT3P35638 169 aa19.92■□□□□ 0.78
SCARB1-202ENST00000339570 ADGRB1O14514 1584 aa19.92■□□□□ 0.78
SCARB1-202ENST00000339570 KIAA1210Q9ULL0 1709 aa19.91■□□□□ 0.78
SCARB1-202ENST00000339570 F6X3S4 739 aa19.91■□□□□ 0.78
SCARB1-202ENST00000339570 MSNP26038 577 aaKnown RBP19.91■□□□□ 0.78
SCARB1-202ENST00000339570 KIAA1211Q6ZU35 1233 aa19.91■□□□□ 0.78
SCARB1-202ENST00000339570 DEPDC5O75140 1603 aa19.91■□□□□ 0.78
SCARB1-202ENST00000339570 RPGRIP1LQ68CZ1 1315 aa19.91■□□□□ 0.78
SCARB1-202ENST00000339570 NSD2O96028 1365 aa19.9■□□□□ 0.78
SCARB1-202ENST00000339570 IL16Q14005 1332 aa19.9■□□□□ 0.78
SCARB1-202ENST00000339570 PLEKHG5O94827 1062 aa19.9■□□□□ 0.78
SCARB1-202ENST00000339570 SKOR2Q2VWA4 1001 aaPredicted RBP19.9■□□□□ 0.78
SCARB1-202ENST00000339570 TXNDC2Q86VQ3 553 aa19.9■□□□□ 0.78
SCARB1-202ENST00000339570 ADGRB3O60242 1522 aa19.89■□□□□ 0.78
SCARB1-202ENST00000339570 GLI2P10070 1586 aa19.89■□□□□ 0.77
SCARB1-202ENST00000339570 MEIS3Q99687 375 aa19.89■□□□□ 0.77
SCARB1-202ENST00000339570 INO80Q9ULG1 1556 aaPredicted RBP19.89■□□□□ 0.77
SCARB1-202ENST00000339570 CIZ1Q9ULV3 898 aaPredicted RBP19.89■□□□□ 0.77
SCARB1-202ENST00000339570 SDSP20132 328 aa19.88■□□□□ 0.77
SCARB1-202ENST00000339570 VWDEQ8N2E2 1590 aa19.88■□□□□ 0.77
SCARB1-202ENST00000339570 SULT6B1Q6IMI4 303 aa19.88■□□□□ 0.77
SCARB1-202ENST00000339570 R3HCC1Q9Y3T6 440 aaKnown RBP19.88■□□□□ 0.77
SCARB1-202ENST00000339570 NRXN1Q9ULB1 1477 aa19.88■□□□□ 0.77
SCARB1-202ENST00000339570 XPCQ01831 940 aaPredicted RBP19.87■□□□□ 0.77
SCARB1-202ENST00000339570 ZMYM3Q14202 1370 aa19.87■□□□□ 0.77
SCARB1-202ENST00000339570 GLIPR1L2Q4G1C9 344 aa19.87■□□□□ 0.77
SCARB1-202ENST00000339570 EXOC6BQ9Y2D4 811 aa19.87■□□□□ 0.77
SCARB1-202ENST00000339570 GDPD2Q9HCC8 539 aa19.86■□□□□ 0.77
SCARB1-202ENST00000339570 PRIM1P49642 420 aaKnown RBP19.86■□□□□ 0.77
SCARB1-202ENST00000339570 SYCE3A1L190 88 aa19.86■□□□□ 0.77
SCARB1-202ENST00000339570 RILPL2Q969X0 211 aa19.86■□□□□ 0.77
SCARB1-202ENST00000339570 TTC22Q5TAA0 569 aa19.85■□□□□ 0.77
SCARB1-202ENST00000339570 LARP6Q9BRS8 491 aaKnown RBP19.85■□□□□ 0.77
SCARB1-202ENST00000339570 API5Q9BZZ5 524 aaKnown RBP19.85■□□□□ 0.77
SCARB1-202ENST00000339570 RBSNQ9H1K0 784 aa19.85■□□□□ 0.77
SCARB1-202ENST00000339570 FAM13BQ9NYF5 915 aa19.85■□□□□ 0.77
SCARB1-202ENST00000339570 NSFL1CQ9UNZ2 370 aaKnown RBP19.85■□□□□ 0.77
SCARB1-202ENST00000339570 NEK4P51957 841 aa19.85■□□□□ 0.77
SCARB1-202ENST00000339570 ZSCAN23Q3MJ62 389 aa19.85■□□□□ 0.77
SCARB1-202ENST00000339570 TRIM6-TRIM34B2RNG4 842 aa19.84■□□□□ 0.77
SCARB1-202ENST00000339570 KIDINS220Q9ULH0 1771 aa19.84■□□□□ 0.77
SCARB1-202ENST00000339570 SLC4A2P04920 1241 aa19.84■□□□□ 0.77
SCARB1-202ENST00000339570 COG3Q96JB2 828 aa19.84■□□□□ 0.77
SCARB1-202ENST00000339570 CAMSAP1Q5T5Y3 1602 aa19.84■□□□□ 0.77
SCARB1-202ENST00000339570 USP26Q9BXU7 913 aa19.83■□□□□ 0.77
SCARB1-202ENST00000339570 IFT57Q9NWB7 429 aa19.83■□□□□ 0.77
SCARB1-202ENST00000339570 RABEP1Q15276 862 aa19.83■□□□□ 0.76
SCARB1-202ENST00000339570 INTS3Q68E01 1043 aaKnown RBP19.83■□□□□ 0.76
SCARB1-202ENST00000339570 ZNF428Q96B54 188 aa19.83■□□□□ 0.76
SCARB1-202ENST00000339570 LRRC7Q96NW7 1537 aa19.82■□□□□ 0.76
SCARB1-202ENST00000339570 MAP4K4O95819 1239 aaPredicted RBP19.82■□□□□ 0.76
SCARB1-202ENST00000339570 KLHL40Q2TBA0 621 aa19.82■□□□□ 0.76
SCARB1-202ENST00000339570 CASC1Q6TDU7 716 aa19.82■□□□□ 0.76
SCARB1-202ENST00000339570 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.82■□□□□ 0.76
SCARB1-202ENST00000339570 FOXO3O43524 673 aa19.82■□□□□ 0.76
SCARB1-202ENST00000339570 CFAP44Q96MT7 982 aa19.82■□□□□ 0.76
SCARB1-202ENST00000339570 UPF3BQ9BZI7 483 aaKnown RBP19.82■□□□□ 0.76
SCARB1-202ENST00000339570 CHMP4BQ9H444 224 aaKnown RBP19.82■□□□□ 0.76
SCARB1-202ENST00000339570 NCOA3Q9Y6Q9 1424 aa19.82■□□□□ 0.76
SCARB1-202ENST00000339570 UHRF1BP1LA0JNW5 1464 aa19.81■□□□□ 0.76
SCARB1-202ENST00000339570 CCDC173Q0VFZ6 552 aa19.81■□□□□ 0.76
SCARB1-202ENST00000339570 ST18O60284 1047 aa19.81■□□□□ 0.76
SCARB1-202ENST00000339570 IL13P35225 146 aa19.81■□□□□ 0.76
SCARB1-202ENST00000339570 PLCB2Q00722 1185 aa19.81■□□□□ 0.76
SCARB1-202ENST00000339570 ZMYND15Q9H091 742 aa19.81■□□□□ 0.76
SCARB1-202ENST00000339570 YTHDC2Q9H6S0 1430 aaKnown RBP19.8■□□□□ 0.76
SCARB1-202ENST00000339570 COL3A1P02461 1466 aaPredicted RBP19.8■□□□□ 0.76
SCARB1-202ENST00000339570 ADGRB2O60241 1585 aa19.8■□□□□ 0.76
SCARB1-202ENST00000339570 MYO3AQ8NEV4 1616 aa19.8■□□□□ 0.76
SCARB1-202ENST00000339570 PTMAP06454 111 aaKnown RBP19.8■□□□□ 0.76
SCARB1-202ENST00000339570 G2E3Q7L622 706 aa19.8■□□□□ 0.76
SCARB1-202ENST00000339570 LMBRD1Q9NUN5 540 aa19.8■□□□□ 0.76
SCARB1-202ENST00000339570 ABCC4O15439 1325 aa19.8■□□□□ 0.76
SCARB1-202ENST00000339570 SETBP1Q9Y6X0 1596 aa19.8■□□□□ 0.76
SCARB1-202ENST00000339570 IFT172Q9UG01 1749 aa19.79■□□□□ 0.76
SCARB1-202ENST00000339570 DCTPP1Q9H773 170 aa19.79■□□□□ 0.76
SCARB1-202ENST00000339570 ANO2Q9NQ90 1003 aa19.79■□□□□ 0.76
SCARB1-202ENST00000339570 ZSCAN30Q86W11 494 aa19.79■□□□□ 0.76
SCARB1-202ENST00000339570 GPT2Q8TD30 523 aa19.79■□□□□ 0.76
SCARB1-202ENST00000339570 PPLO60437 1756 aa19.79■□□□□ 0.76
SCARB1-202ENST00000339570 CEP85Q6P2H3 762 aa19.78■□□□□ 0.76
SCARB1-202ENST00000339570 MSH6P52701 1360 aa19.78■□□□□ 0.76
SCARB1-202ENST00000339570 NUCB2P80303 420 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms