RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 NWD1Q149M9 1564 aa16.7■□□□□ 0.26
CDK5RAP1-201ENST00000339269 SSH2Q76I76 1423 aa16.7■□□□□ 0.26
CDK5RAP1-201ENST00000339269 FAM161AQ3B820 660 aa16.7■□□□□ 0.26
CDK5RAP1-201ENST00000339269 HMOX1P09601 288 aa16.69■□□□□ 0.26
CDK5RAP1-201ENST00000339269 RGS3P49796 1198 aa16.69■□□□□ 0.26
CDK5RAP1-201ENST00000339269 RRS1Q15050 365 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP1-201ENST00000339269 XIRP1Q702N8 1843 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP1-201ENST00000339269 PLEKHG3A1L390 1219 aa16.69■□□□□ 0.26
CDK5RAP1-201ENST00000339269 KCNA6P17658 529 aa16.69■□□□□ 0.26
CDK5RAP1-201ENST00000339269 AAMPQ13685 434 aa16.69■□□□□ 0.26
CDK5RAP1-201ENST00000339269 MVPQ14764 893 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP1-201ENST00000339269 NFE2L2Q16236 605 aa16.69■□□□□ 0.26
CDK5RAP1-201ENST00000339269 TRIM27P14373 513 aa16.68■□□□□ 0.26
CDK5RAP1-201ENST00000339269 ZKSCAN2Q63HK3 967 aa16.68■□□□□ 0.26
CDK5RAP1-201ENST00000339269 COG3Q96JB2 828 aa16.68■□□□□ 0.26
CDK5RAP1-201ENST00000339269 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP1-201ENST00000339269 TTC21BQ7Z4L5 1316 aa16.68■□□□□ 0.26
CDK5RAP1-201ENST00000339269 ZNF692Q9BU19 519 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP1-201ENST00000339269 PIK3R4Q99570 1358 aa16.67■□□□□ 0.26
CDK5RAP1-201ENST00000339269 USP6P35125 1406 aa16.67■□□□□ 0.26
CDK5RAP1-201ENST00000339269 PTCH1Q13635 1447 aa16.67■□□□□ 0.26
CDK5RAP1-201ENST00000339269 SMC4Q9NTJ3 1288 aa16.67■□□□□ 0.26
CDK5RAP1-201ENST00000339269 ZBTB47Q9UFB7 747 aaPredicted RBP16.67■□□□□ 0.26
CDK5RAP1-201ENST00000339269 NALCNQ8IZF0 1738 aa16.67■□□□□ 0.26
CDK5RAP1-201ENST00000339269 ACEP12821 1306 aa16.67■□□□□ 0.26
CDK5RAP1-201ENST00000339269 PEAK1Q9H792 1746 aa16.66■□□□□ 0.26
CDK5RAP1-201ENST00000339269 THUMPD2Q9BTF0 503 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP1-201ENST00000339269 XRN1Q8IZH2 1706 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP1-201ENST00000339269 DZIP1LQ8IYY4 767 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP1-201ENST00000339269 ZNF853P0CG23 659 aa16.65■□□□□ 0.26
CDK5RAP1-201ENST00000339269 AMOTL2Q9Y2J4 779 aa16.65■□□□□ 0.26
CDK5RAP1-201ENST00000339269 USP31Q70CQ4 1352 aa16.64■□□□□ 0.25
CDK5RAP1-201ENST00000339269 ATF7IPQ6VMQ6 1270 aa16.63■□□□□ 0.25
CDK5RAP1-201ENST00000339269 PROSER2Q86WR7 435 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP1-201ENST00000339269 PMFBP1Q8TBY8 1022 aa16.63■□□□□ 0.25
CDK5RAP1-201ENST00000339269 NOB1Q9ULX3 412 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP1-201ENST00000339269 USP19O94966 1318 aa16.63■□□□□ 0.25
CDK5RAP1-201ENST00000339269 RBM33Q96EV2 1170 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP1-201ENST00000339269 VIRMAQ69YN4 1812 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP1-201ENST00000339269 RGPD1P0DJD0 1748 aa16.62■□□□□ 0.25
CDK5RAP1-201ENST00000339269 NUTM2FA1L443 756 aa16.62■□□□□ 0.25
CDK5RAP1-201ENST00000339269 BRPF1P55201 1214 aaPredicted RBP16.62■□□□□ 0.25
CDK5RAP1-201ENST00000339269 DLG5Q8TDM6 1919 aa16.61■□□□□ 0.25
CDK5RAP1-201ENST00000339269 EIF4A2Q14240 407 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP1-201ENST00000339269 TMEM94Q12767 1356 aa16.61■□□□□ 0.25
CDK5RAP1-201ENST00000339269 ALDH1L2Q3SY69 923 aa16.61■□□□□ 0.25
CDK5RAP1-201ENST00000339269 AEBP1Q8IUX7 1158 aa16.61■□□□□ 0.25
CDK5RAP1-201ENST00000339269 TSPYL6Q8N831 410 aa16.61■□□□□ 0.25
CDK5RAP1-201ENST00000339269 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
CDK5RAP1-201ENST00000339269 TMEM57Q8N5G2 664 aa16.6■□□□□ 0.25
CDK5RAP1-201ENST00000339269 IFT57Q9NWB7 429 aa16.6■□□□□ 0.25
CDK5RAP1-201ENST00000339269 VAMP4O75379 141 aa16.59■□□□□ 0.25
CDK5RAP1-201ENST00000339269 FTSJ3Q8IY81 847 aaKnown RBP16.59■□□□□ 0.25
CDK5RAP1-201ENST00000339269 MBIPQ9NS73 344 aa16.59■□□□□ 0.25
CDK5RAP1-201ENST00000339269 KIF16BQ96L93 1317 aa16.58■□□□□ 0.24
CDK5RAP1-201ENST00000339269 FAM83GA6ND36 823 aa16.58■□□□□ 0.24
CDK5RAP1-201ENST00000339269 ZBTB40Q9NUA8 1239 aa16.58■□□□□ 0.24
CDK5RAP1-201ENST00000339269 SEC24BO95487 1268 aa16.57■□□□□ 0.24
CDK5RAP1-201ENST00000339269 MRPL50Q8N5N7 158 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP1-201ENST00000339269 HDAC1Q13547 482 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP1-201ENST00000339269 C14orf37Q86TY3 774 aa16.56■□□□□ 0.24
CDK5RAP1-201ENST00000339269 RWDD1Q9H446 243 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP1-201ENST00000339269 ITPRIPQ8IWB1 547 aa16.56■□□□□ 0.24
CDK5RAP1-201ENST00000339269 ZNF428Q96B54 188 aa16.56■□□□□ 0.24
CDK5RAP1-201ENST00000339269 DDX19BQ9UMR2 479 aa16.56■□□□□ 0.24
CDK5RAP1-201ENST00000339269 LAS1LQ9Y4W2 734 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP1-201ENST00000339269 RGPD8O14715 1765 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP1-201ENST00000339269 PIK3C2AO00443 1686 aa16.55■□□□□ 0.24
CDK5RAP1-201ENST00000339269 UBAP1LF5GYI3 381 aa16.55■□□□□ 0.24
CDK5RAP1-201ENST00000339269 GNAI1P63096 354 aa16.55■□□□□ 0.24
CDK5RAP1-201ENST00000339269 HSP90AB2PQ58FF8 381 aa16.55■□□□□ 0.24
CDK5RAP1-201ENST00000339269 NEFMP07197 916 aa16.54■□□□□ 0.24
CDK5RAP1-201ENST00000339269 DCTN1Q14203 1278 aa16.54■□□□□ 0.24
CDK5RAP1-201ENST00000339269 C8orf58Q8NAV2 365 aa16.54■□□□□ 0.24
CDK5RAP1-201ENST00000339269 FBXO41Q8TF61 875 aa16.54■□□□□ 0.24
CDK5RAP1-201ENST00000339269 CFAP44Q96MT7 982 aa16.54■□□□□ 0.24
CDK5RAP1-201ENST00000339269 CALD1Q05682 793 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP1-201ENST00000339269 NBR1Q14596 966 aa16.54■□□□□ 0.24
CDK5RAP1-201ENST00000339269 DDRGK1Q96HY6 314 aa16.54■□□□□ 0.24
CDK5RAP1-201ENST00000339269 MARF1Q9Y4F3 1742 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP1-201ENST00000339269 TTC21AQ8NDW8 1320 aa16.54■□□□□ 0.24
CDK5RAP1-201ENST00000339269 SULT6B1Q6IMI4 303 aa16.53■□□□□ 0.24
CDK5RAP1-201ENST00000339269 MAP3K19Q56UN5 1328 aa16.53■□□□□ 0.24
CDK5RAP1-201ENST00000339269 MSH6P52701 1360 aa16.53■□□□□ 0.24
CDK5RAP1-201ENST00000339269 SMC5Q8IY18 1101 aa16.52■□□□□ 0.24
CDK5RAP1-201ENST00000339269 ANKARQ7Z5J8 1434 aa16.52■□□□□ 0.23
CDK5RAP1-201ENST00000339269 IPO8O15397 1037 aaKnown RBP16.52■□□□□ 0.23
CDK5RAP1-201ENST00000339269 LMOD3Q0VAK6 560 aa16.52■□□□□ 0.23
CDK5RAP1-201ENST00000339269 NCOA3Q9Y6Q9 1424 aa16.51■□□□□ 0.23
CDK5RAP1-201ENST00000339269 FMN2Q9NZ56 1722 aa16.51■□□□□ 0.23
CDK5RAP1-201ENST00000339269 TOM1O60784 492 aa16.51■□□□□ 0.23
CDK5RAP1-201ENST00000339269 SLC4A3P48751 1232 aa16.51■□□□□ 0.23
CDK5RAP1-201ENST00000339269 ABCC4O15439 1325 aa16.51■□□□□ 0.23
CDK5RAP1-201ENST00000339269 ARHGEF10O15013 1369 aa16.51■□□□□ 0.23
CDK5RAP1-201ENST00000339269 ARHGAP45Q92619 1136 aa16.5■□□□□ 0.23
CDK5RAP1-201ENST00000339269 CRB1P82279 1406 aa16.49■□□□□ 0.23
CDK5RAP1-201ENST00000339269 USP54Q70EL1 1684 aa16.49■□□□□ 0.23
CDK5RAP1-201ENST00000339269 ELL2O00472 640 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP1-201ENST00000339269 ZBTB7BO15156 539 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP1-201ENST00000339269 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms