RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 C1orf167Q5SNV9 1468 aa21.11■□□□□ 0.97
HPS1-202ENST00000338546 RTL1A6NKG5 1358 aa21.11■□□□□ 0.97
HPS1-202ENST00000338546 HMOX1P09601 288 aa21.1■□□□□ 0.97
HPS1-202ENST00000338546 PAK3O75914 559 aaPredicted RBP21.1■□□□□ 0.97
HPS1-202ENST00000338546 HSP90AB2PQ58FF8 381 aa21.1■□□□□ 0.97
HPS1-202ENST00000338546 TMEM94Q12767 1356 aa21.09■□□□□ 0.97
HPS1-202ENST00000338546 MST1RQ04912 1400 aa21.09■□□□□ 0.97
HPS1-202ENST00000338546 STRCP1A6NGW2 1772 aa21.09■□□□□ 0.97
HPS1-202ENST00000338546 AMPHP49418 695 aa21.09■□□□□ 0.97
HPS1-202ENST00000338546 KCNH5Q8NCM2 988 aa21.09■□□□□ 0.97
HPS1-202ENST00000338546 CCDC136Q96JN2 1154 aa21.09■□□□□ 0.97
HPS1-202ENST00000338546 PHACTR3Q96KR7 559 aa21.09■□□□□ 0.97
HPS1-202ENST00000338546 ATF3P18847 181 aa21.08■□□□□ 0.97
HPS1-202ENST00000338546 B4GALNT3Q6L9W6 998 aa21.08■□□□□ 0.97
HPS1-202ENST00000338546 HSPA2P54652 639 aa21.07■□□□□ 0.96
HPS1-202ENST00000338546 EXOC6Q8TAG9 804 aa21.07■□□□□ 0.96
HPS1-202ENST00000338546 PLIN1O60240 522 aa21.06■□□□□ 0.96
HPS1-202ENST00000338546 CADPS2Q86UW7 1296 aa21.06■□□□□ 0.96
HPS1-202ENST00000338546 ORAI2Q96SN7 254 aa21.06■□□□□ 0.96
HPS1-202ENST00000338546 FANCIQ9NVI1 1328 aa21.06■□□□□ 0.96
HPS1-202ENST00000338546 KDRP35968 1356 aa21.06■□□□□ 0.96
HPS1-202ENST00000338546 PDE3AQ14432 1141 aa21.06■□□□□ 0.96
HPS1-202ENST00000338546 SULT6B1Q6IMI4 303 aa21.06■□□□□ 0.96
HPS1-202ENST00000338546 STRCQ7RTU9 1775 aa21.06■□□□□ 0.96
HPS1-202ENST00000338546 RARSP54136 660 aaKnown RBP21.05■□□□□ 0.96
HPS1-202ENST00000338546 PHRF1Q9P1Y6 1649 aaKnown RBP21.04■□□□□ 0.96
HPS1-202ENST00000338546 NFAT5O94916 1531 aa21.04■□□□□ 0.96
HPS1-202ENST00000338546 IGSF1Q8N6C5 1336 aa21.03■□□□□ 0.96
HPS1-202ENST00000338546 TRPM3Q9HCF6 1732 aaPredicted RBP21.03■□□□□ 0.96
HPS1-202ENST00000338546 HOXC9P31274 260 aa21.03■□□□□ 0.96
HPS1-202ENST00000338546 SOX12O15370 315 aa21.02■□□□□ 0.96
HPS1-202ENST00000338546 ZNF428Q96B54 188 aa21.02■□□□□ 0.96
HPS1-202ENST00000338546 IFT57Q9NWB7 429 aa21.02■□□□□ 0.96
HPS1-202ENST00000338546 SLIT3O75094 1523 aa21.02■□□□□ 0.96
HPS1-202ENST00000338546 MSH6P52701 1360 aa21.02■□□□□ 0.96
HPS1-202ENST00000338546 FOXO3O43524 673 aa21.02■□□□□ 0.95
HPS1-202ENST00000338546 BCAR3O75815 825 aa21.02■□□□□ 0.95
HPS1-202ENST00000338546 GNAI1P63096 354 aa21.02■□□□□ 0.95
HPS1-202ENST00000338546 CRBNQ96SW2 442 aa21.02■□□□□ 0.95
HPS1-202ENST00000338546 KRT28Q7Z3Y7 464 aa21.01■□□□□ 0.95
HPS1-202ENST00000338546 DLG5Q8TDM6 1919 aa21■□□□□ 0.95
HPS1-202ENST00000338546 NUTM2GQ5VZR2 741 aa21■□□□□ 0.95
HPS1-202ENST00000338546 IP6K1Q92551 441 aa21■□□□□ 0.95
HPS1-202ENST00000338546 USP19O94966 1318 aa20.99■□□□□ 0.95
HPS1-202ENST00000338546 ZNF853P0CG23 659 aa20.99■□□□□ 0.95
HPS1-202ENST00000338546 AAMPQ13685 434 aa20.99■□□□□ 0.95
HPS1-202ENST00000338546 AEBP1Q8IUX7 1158 aa20.99■□□□□ 0.95
HPS1-202ENST00000338546 LTN1O94822 1766 aa20.99■□□□□ 0.95
HPS1-202ENST00000338546 C20orf194Q5TEA3 1177 aa20.98■□□□□ 0.95
HPS1-202ENST00000338546 EXOSC9Q06265 439 aaKnown RBP20.97■□□□□ 0.95
HPS1-202ENST00000338546 EYA1Q99502 592 aa20.97■□□□□ 0.95
HPS1-202ENST00000338546 MS4A1P11836 297 aa20.97■□□□□ 0.95
HPS1-202ENST00000338546 TSR2Q969E8 191 aaKnown RBP20.97■□□□□ 0.95
HPS1-202ENST00000338546 CFAP44Q96MT7 982 aa20.97■□□□□ 0.95
HPS1-202ENST00000338546 ALS2Q96Q42 1657 aa20.95■□□□□ 0.94
HPS1-202ENST00000338546 ALDH1L2Q3SY69 923 aa20.95■□□□□ 0.94
HPS1-202ENST00000338546 GAS2L2Q8NHY3 880 aa20.95■□□□□ 0.94
HPS1-202ENST00000338546 NPHP3Q7Z494 1330 aa20.95■□□□□ 0.94
HPS1-202ENST00000338546 XIRP1Q702N8 1843 aaKnown RBP20.94■□□□□ 0.94
HPS1-202ENST00000338546 HTATSF1O43719 755 aaKnown RBP20.94■□□□□ 0.94
HPS1-202ENST00000338546 GCP02774 474 aa20.94■□□□□ 0.94
HPS1-202ENST00000338546 CANXP27824 592 aaKnown RBP20.94■□□□□ 0.94
HPS1-202ENST00000338546 BRPF1P55201 1214 aaPredicted RBP20.93■□□□□ 0.94
HPS1-202ENST00000338546 ARHGEF25Q86VW2 580 aa20.93■□□□□ 0.94
HPS1-202ENST00000338546 TSHZ2Q9NRE2 1034 aa20.92■□□□□ 0.94
HPS1-202ENST00000338546 HAP1P54257 671 aaPredicted RBP20.9■□□□□ 0.94
HPS1-202ENST00000338546 ZKSCAN2Q63HK3 967 aa20.89■□□□□ 0.94
HPS1-202ENST00000338546 MBIPQ9NS73 344 aa20.89■□□□□ 0.93
HPS1-202ENST00000338546 XPCQ01831 940 aaPredicted RBP20.88■□□□□ 0.93
HPS1-202ENST00000338546 MTHFSDQ2M296 383 aaKnown RBP20.88■□□□□ 0.93
HPS1-202ENST00000338546 SSH1Q8WYL5 1049 aa20.88■□□□□ 0.93
HPS1-202ENST00000338546 FRAT1Q92837 279 aaPredicted RBP20.88■□□□□ 0.93
HPS1-202ENST00000338546 THUMPD2Q9BTF0 503 aaKnown RBP20.88■□□□□ 0.93
HPS1-202ENST00000338546 SMC4Q9NTJ3 1288 aa20.88■□□□□ 0.93
HPS1-202ENST00000338546 KIF16BQ96L93 1317 aa20.88■□□□□ 0.93
HPS1-202ENST00000338546 CHL1O00533 1208 aa20.87■□□□□ 0.93
HPS1-202ENST00000338546 IPO8O15397 1037 aaKnown RBP20.87■□□□□ 0.93
HPS1-202ENST00000338546 RTF1Q92541 710 aaKnown RBP20.87■□□□□ 0.93
HPS1-202ENST00000338546 LAS1LQ9Y4W2 734 aaKnown RBP20.87■□□□□ 0.93
HPS1-202ENST00000338546 TNS3Q68CZ2 1445 aa20.87■□□□□ 0.93
HPS1-202ENST00000338546 PXDNQ92626 1479 aa20.87■□□□□ 0.93
HPS1-202ENST00000338546 NCAPD2Q15021 1401 aa20.86■□□□□ 0.93
HPS1-202ENST00000338546 ABCC6O95255 1503 aa20.86■□□□□ 0.93
HPS1-202ENST00000338546 FAM83GA6ND36 823 aa20.85■□□□□ 0.93
HPS1-202ENST00000338546 VAMP4O75379 141 aa20.85■□□□□ 0.93
HPS1-202ENST00000338546 LMOD2Q6P5Q4 547 aa20.85■□□□□ 0.93
HPS1-202ENST00000338546 KIAA0232Q92628 1395 aa20.85■□□□□ 0.93
HPS1-202ENST00000338546 CRB1P82279 1406 aa20.85■□□□□ 0.93
HPS1-202ENST00000338546 ZNF335Q9H4Z2 1342 aaPredicted RBP20.85■□□□□ 0.93
HPS1-202ENST00000338546 CENPQQ7L2Z9 268 aaPredicted RBP20.85■□□□□ 0.93
HPS1-202ENST00000338546 BABAM1Q9NWV8 329 aa20.84■□□□□ 0.93
HPS1-202ENST00000338546 MED1Q15648 1581 aaPredicted RBP20.83■□□□□ 0.93
HPS1-202ENST00000338546 SPATA31A3Q5VYP0 1347 aa20.83■□□□□ 0.93
HPS1-202ENST00000338546 ATF7IPQ6VMQ6 1270 aa20.83■□□□□ 0.92
HPS1-202ENST00000338546 DZIP1LQ8IYY4 767 aaKnown RBP20.83■□□□□ 0.92
HPS1-202ENST00000338546 PANK1Q8TE04 598 aa20.83■□□□□ 0.92
HPS1-202ENST00000338546 ARHGAP45Q92619 1136 aa20.83■□□□□ 0.92
HPS1-202ENST00000338546 LTV1Q96GA3 475 aaPredicted RBP20.83■□□□□ 0.92
HPS1-202ENST00000338546 KDM2BQ8NHM5 1336 aa20.82■□□□□ 0.92
HPS1-202ENST00000338546 GNAT3A8MTJ3 354 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms