RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 NEUROD2Q15784 382 aa17.59■□□□□ 0.41
LMO1-201ENST00000335790 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.59■□□□□ 0.41
LMO1-201ENST00000335790 MYH16Q9H6N6 1097 aa17.59■□□□□ 0.41
LMO1-201ENST00000335790 MAP3K19Q56UN5 1328 aa17.58■□□□□ 0.4
LMO1-201ENST00000335790 EIF4A2Q14240 407 aaKnown RBP17.58■□□□□ 0.4
LMO1-201ENST00000335790 NFE2L2Q16236 605 aa17.58■□□□□ 0.4
LMO1-201ENST00000335790 PROSER2Q86WR7 435 aaPredicted RBP17.58■□□□□ 0.4
LMO1-201ENST00000335790 C19orf44Q9H6X5 657 aa17.57■□□□□ 0.4
LMO1-201ENST00000335790 NFAT5O94916 1531 aa17.57■□□□□ 0.4
LMO1-201ENST00000335790 C1orf167Q5SNV9 1468 aa17.56■□□□□ 0.4
LMO1-201ENST00000335790 RTL1A6NKG5 1358 aa17.56■□□□□ 0.4
LMO1-201ENST00000335790 ARHGEF10O15013 1369 aa17.56■□□□□ 0.4
LMO1-201ENST00000335790 NEFMP07197 916 aa17.56■□□□□ 0.4
LMO1-201ENST00000335790 RIPK4P57078 832 aa17.56■□□□□ 0.4
LMO1-201ENST00000335790 XIRP1Q702N8 1843 aaKnown RBP17.56■□□□□ 0.4
LMO1-201ENST00000335790 LTN1O94822 1766 aa17.56■□□□□ 0.4
LMO1-201ENST00000335790 NLRP6P59044 892 aa17.55■□□□□ 0.4
LMO1-201ENST00000335790 EXOC6Q8TAG9 804 aa17.55■□□□□ 0.4
LMO1-201ENST00000335790 SLIT3O75094 1523 aa17.55■□□□□ 0.4
LMO1-201ENST00000335790 KDRP35968 1356 aa17.54■□□□□ 0.4
LMO1-201ENST00000335790 B4GALNT3Q6L9W6 998 aa17.54■□□□□ 0.4
LMO1-201ENST00000335790 PHACTR3Q96KR7 559 aa17.54■□□□□ 0.4
LMO1-201ENST00000335790 HMOX1P09601 288 aa17.53■□□□□ 0.4
LMO1-201ENST00000335790 HSP90AB2PQ58FF8 381 aa17.53■□□□□ 0.4
LMO1-201ENST00000335790 RBM33Q96EV2 1170 aaKnown RBP17.53■□□□□ 0.4
LMO1-201ENST00000335790 FANCIQ9NVI1 1328 aa17.52■□□□□ 0.4
LMO1-201ENST00000335790 ALS2Q96Q42 1657 aa17.52■□□□□ 0.4
LMO1-201ENST00000335790 PLIN1O60240 522 aa17.52■□□□□ 0.4
LMO1-201ENST00000335790 CALD1Q05682 793 aaKnown RBP17.52■□□□□ 0.4
LMO1-201ENST00000335790 LMOD3Q0VAK6 560 aa17.52■□□□□ 0.4
LMO1-201ENST00000335790 ESCO1Q5FWF5 840 aa17.52■□□□□ 0.4
LMO1-201ENST00000335790 ABTB2Q8N961 1025 aa17.52■□□□□ 0.4
LMO1-201ENST00000335790 RGS17Q9UGC6 210 aaPredicted RBP17.52■□□□□ 0.4
LMO1-201ENST00000335790 TMEM94Q12767 1356 aa17.52■□□□□ 0.39
LMO1-201ENST00000335790 IGSF1Q8N6C5 1336 aa17.51■□□□□ 0.39
LMO1-201ENST00000335790 RARSP54136 660 aaKnown RBP17.51■□□□□ 0.39
LMO1-201ENST00000335790 PDE3AQ14432 1141 aa17.51■□□□□ 0.39
LMO1-201ENST00000335790 C14orf37Q86TY3 774 aa17.51■□□□□ 0.39
LMO1-201ENST00000335790 CCDC136Q96JN2 1154 aa17.51■□□□□ 0.39
LMO1-201ENST00000335790 CRBNQ96SW2 442 aa17.5■□□□□ 0.39
LMO1-201ENST00000335790 BCAR3O75815 825 aa17.49■□□□□ 0.39
LMO1-201ENST00000335790 PSME1Q06323 249 aa17.49■□□□□ 0.39
LMO1-201ENST00000335790 ORAI2Q96SN7 254 aa17.49■□□□□ 0.39
LMO1-201ENST00000335790 USP19O94966 1318 aa17.48■□□□□ 0.39
LMO1-201ENST00000335790 ZNF853P0CG23 659 aa17.48■□□□□ 0.39
LMO1-201ENST00000335790 HOXC9P31274 260 aa17.48■□□□□ 0.39
LMO1-201ENST00000335790 AMPHP49418 695 aa17.48■□□□□ 0.39
LMO1-201ENST00000335790 C20orf194Q5TEA3 1177 aa17.48■□□□□ 0.39
LMO1-201ENST00000335790 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
LMO1-201ENST00000335790 SULT6B1Q6IMI4 303 aa17.47■□□□□ 0.39
LMO1-201ENST00000335790 PAK3O75914 559 aaPredicted RBP17.46■□□□□ 0.39
LMO1-201ENST00000335790 AEBP1Q8IUX7 1158 aa17.46■□□□□ 0.39
LMO1-201ENST00000335790 ZNF428Q96B54 188 aa17.46■□□□□ 0.39
LMO1-201ENST00000335790 TSHZ2Q9NRE2 1034 aa17.46■□□□□ 0.39
LMO1-201ENST00000335790 IFT57Q9NWB7 429 aa17.46■□□□□ 0.39
LMO1-201ENST00000335790 CADPS2Q86UW7 1296 aa17.45■□□□□ 0.38
LMO1-201ENST00000335790 IP6K1Q92551 441 aa17.45■□□□□ 0.38
LMO1-201ENST00000335790 ATF3P18847 181 aa17.44■□□□□ 0.38
LMO1-201ENST00000335790 GNAI1P63096 354 aa17.44■□□□□ 0.38
LMO1-201ENST00000335790 EXOSC9Q06265 439 aaKnown RBP17.44■□□□□ 0.38
LMO1-201ENST00000335790 POTEAQ6S8J7 498 aa17.44■□□□□ 0.38
LMO1-201ENST00000335790 EYA1Q99502 592 aa17.44■□□□□ 0.38
LMO1-201ENST00000335790 CAMTA1Q9Y6Y1 1673 aa17.44■□□□□ 0.38
LMO1-201ENST00000335790 FOXO3O43524 673 aa17.43■□□□□ 0.38
LMO1-201ENST00000335790 BRPF1P55201 1214 aaPredicted RBP17.43■□□□□ 0.38
LMO1-201ENST00000335790 AAMPQ13685 434 aa17.43■□□□□ 0.38
LMO1-201ENST00000335790 KRT28Q7Z3Y7 464 aa17.43■□□□□ 0.38
LMO1-201ENST00000335790 TSR2Q969E8 191 aaKnown RBP17.43■□□□□ 0.38
LMO1-201ENST00000335790 NCAPD2Q15021 1401 aa17.43■□□□□ 0.38
LMO1-201ENST00000335790 LRRC37A3O60309 1634 aa17.43■□□□□ 0.38
LMO1-201ENST00000335790 MSH6P52701 1360 aa17.42■□□□□ 0.38
LMO1-201ENST00000335790 CRYBG1Q9Y4K1 1723 aa17.42■□□□□ 0.38
LMO1-201ENST00000335790 NUTM2GQ5VZR2 741 aa17.42■□□□□ 0.38
LMO1-201ENST00000335790 CFAP44Q96MT7 982 aa17.42■□□□□ 0.38
LMO1-201ENST00000335790 SOX12O15370 315 aa17.41■□□□□ 0.38
LMO1-201ENST00000335790 ALDH1L2Q3SY69 923 aa17.41■□□□□ 0.38
LMO1-201ENST00000335790 ABCC6O95255 1503 aa17.41■□□□□ 0.38
LMO1-201ENST00000335790 PXDNQ92626 1479 aa17.4■□□□□ 0.38
LMO1-201ENST00000335790 ARHGEF25Q86VW2 580 aa17.4■□□□□ 0.38
LMO1-201ENST00000335790 HTATSF1O43719 755 aaKnown RBP17.39■□□□□ 0.37
LMO1-201ENST00000335790 GCP02774 474 aa17.38■□□□□ 0.37
LMO1-201ENST00000335790 MS4A1P11836 297 aa17.38■□□□□ 0.37
LMO1-201ENST00000335790 NPHP3Q7Z494 1330 aa17.38■□□□□ 0.37
LMO1-201ENST00000335790 KDM2BQ8NHM5 1336 aa17.38■□□□□ 0.37
LMO1-201ENST00000335790 CRB1P82279 1406 aa17.38■□□□□ 0.37
LMO1-201ENST00000335790 LMO7Q8WWI1 1683 aa17.37■□□□□ 0.37
LMO1-201ENST00000335790 GAS2L2Q8NHY3 880 aa17.37■□□□□ 0.37
LMO1-201ENST00000335790 RGPD2P0DJD1 1756 aa17.37■□□□□ 0.37
LMO1-201ENST00000335790 COL18A1P39060 1754 aa17.36■□□□□ 0.37
LMO1-201ENST00000335790 CHL1O00533 1208 aa17.36■□□□□ 0.37
LMO1-201ENST00000335790 SSH1Q8WYL5 1049 aa17.36■□□□□ 0.37
LMO1-201ENST00000335790 THUMPD2Q9BTF0 503 aaKnown RBP17.36■□□□□ 0.37
LMO1-201ENST00000335790 MBIPQ9NS73 344 aa17.36■□□□□ 0.37
LMO1-201ENST00000335790 TNS3Q68CZ2 1445 aa17.36■□□□□ 0.37
LMO1-201ENST00000335790 VAMP4O75379 141 aa17.35■□□□□ 0.37
LMO1-201ENST00000335790 MTHFSDQ2M296 383 aaKnown RBP17.35■□□□□ 0.37
LMO1-201ENST00000335790 ZKSCAN2Q63HK3 967 aa17.35■□□□□ 0.37
LMO1-201ENST00000335790 KIF16BQ96L93 1317 aa17.35■□□□□ 0.37
LMO1-201ENST00000335790 KIAA0232Q92628 1395 aa17.35■□□□□ 0.37
LMO1-201ENST00000335790 FAM83GA6ND36 823 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms