RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 NOB1Q9ULX3 412 aaKnown RBP16.98■□□□□ 0.31
RC3H2-201ENST00000335387 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.97■□□□□ 0.31
RC3H2-201ENST00000335387 NUCB1Q02818 461 aa16.97■□□□□ 0.31
RC3H2-201ENST00000335387 UPF2Q9HAU5 1272 aaKnown RBP16.97■□□□□ 0.31
RC3H2-201ENST00000335387 IFT57Q9NWB7 429 aa16.97■□□□□ 0.31
RC3H2-201ENST00000335387 ABCC4O15439 1325 aa16.96■□□□□ 0.31
RC3H2-201ENST00000335387 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.96■□□□□ 0.31
RC3H2-201ENST00000335387 U2SURPO15042 1029 aaKnown RBP16.95■□□□□ 0.3
RC3H2-201ENST00000335387 FRAT2O75474 233 aaPredicted RBP16.95■□□□□ 0.3
RC3H2-201ENST00000335387 CHMP4BQ9H444 224 aaKnown RBP16.95■□□□□ 0.3
RC3H2-201ENST00000335387 PEAK1Q9H792 1746 aa16.95■□□□□ 0.3
RC3H2-201ENST00000335387 TMEM57Q8N5G2 664 aa16.95■□□□□ 0.3
RC3H2-201ENST00000335387 TBC1D2Q9BYX2 928 aa16.95■□□□□ 0.3
RC3H2-201ENST00000335387 ZNF142P52746 1687 aaPredicted RBP16.94■□□□□ 0.3
RC3H2-201ENST00000335387 WASLO00401 505 aaPredicted RBP16.94■□□□□ 0.3
RC3H2-201ENST00000335387 RBM25P49756 843 aaKnown RBP16.94■□□□□ 0.3
RC3H2-201ENST00000335387 MRPL50Q8N5N7 158 aaKnown RBP16.94■□□□□ 0.3
RC3H2-201ENST00000335387 LRRC37A3O60309 1634 aa16.94■□□□□ 0.3
RC3H2-201ENST00000335387 OVOS2A0A0J9YW53 1432 aa16.94■□□□□ 0.3
RC3H2-201ENST00000335387 OVOS2Q6IE36 1432 aa16.94■□□□□ 0.3
RC3H2-201ENST00000335387 METP08581 1390 aa16.93■□□□□ 0.3
RC3H2-201ENST00000335387 VAMP4O75379 141 aa16.93■□□□□ 0.3
RC3H2-201ENST00000335387 DDIT3P35638 169 aa16.93■□□□□ 0.3
RC3H2-201ENST00000335387 SAFB2Q14151 953 aaKnown RBP eCLIP16.93■□□□□ 0.3
RC3H2-201ENST00000335387 ZBTB7BO15156 539 aaPredicted RBP16.92■□□□□ 0.3
RC3H2-201ENST00000335387 SSH2Q76I76 1423 aa16.91■□□□□ 0.3
RC3H2-201ENST00000335387 SNX21Q969T3 373 aa16.91■□□□□ 0.3
RC3H2-201ENST00000335387 TUBGCP6Q96RT7 1819 aa16.91■□□□□ 0.3
RC3H2-201ENST00000335387 PRKAR2BP31323 418 aa16.9■□□□□ 0.3
RC3H2-201ENST00000335387 GNAI1P63096 354 aa16.9■□□□□ 0.3
RC3H2-201ENST00000335387 GCC1Q96CN9 775 aa16.9■□□□□ 0.3
RC3H2-201ENST00000335387 ADAMTS13Q76LX8 1427 aa16.9■□□□□ 0.3
RC3H2-201ENST00000335387 ITPRIPQ8IWB1 547 aa16.9■□□□□ 0.3
RC3H2-201ENST00000335387 BMP2KLQ5H9B9 411 aa16.9■□□□□ 0.3
RC3H2-201ENST00000335387 USP31Q70CQ4 1352 aa16.89■□□□□ 0.3
RC3H2-201ENST00000335387 LMOD3Q0VAK6 560 aa16.89■□□□□ 0.29
RC3H2-201ENST00000335387 DIP2AQ14689 1571 aa16.89■□□□□ 0.29
RC3H2-201ENST00000335387 MARF1Q9Y4F3 1742 aaKnown RBP16.89■□□□□ 0.29
RC3H2-201ENST00000335387 C22orf23Q9BZE7 217 aa16.88■□□□□ 0.29
RC3H2-201ENST00000335387 RGS12O14924 1447 aa16.88■□□□□ 0.29
RC3H2-201ENST00000335387 CFAP44Q96MT7 982 aa16.88■□□□□ 0.29
RC3H2-201ENST00000335387 ZNF692Q9BU19 519 aaPredicted RBP16.88■□□□□ 0.29
RC3H2-201ENST00000335387 PHACTR3Q96KR7 559 aa16.88■□□□□ 0.29
RC3H2-201ENST00000335387 SLIT1O75093 1534 aa16.87■□□□□ 0.29
RC3H2-201ENST00000335387 KIAA0232Q92628 1395 aa16.87■□□□□ 0.29
RC3H2-201ENST00000335387 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
RC3H2-201ENST00000335387 WAPLQ7Z5K2 1190 aa16.86■□□□□ 0.29
RC3H2-201ENST00000335387 TMEM2Q9UHN6 1383 aa16.86■□□□□ 0.29
RC3H2-201ENST00000335387 PLEKHG1Q9ULL1 1385 aa16.86■□□□□ 0.29
RC3H2-201ENST00000335387 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
RC3H2-201ENST00000335387 ARHGAP23Q9P227 1491 aa16.85■□□□□ 0.29
RC3H2-201ENST00000335387 MBIPQ9NS73 344 aa16.84■□□□□ 0.29
RC3H2-201ENST00000335387 XRN1Q8IZH2 1706 aaKnown RBP16.84■□□□□ 0.29
RC3H2-201ENST00000335387 IL27Q8NEV9 243 aa16.84■□□□□ 0.29
RC3H2-201ENST00000335387 NUDT16Q96DE0 195 aaKnown RBP16.83■□□□□ 0.29
RC3H2-201ENST00000335387 CACNA1FO60840 1977 aa16.83■□□□□ 0.29
RC3H2-201ENST00000335387 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.28
RC3H2-201ENST00000335387 ATP10DQ9P241 1426 aa16.83■□□□□ 0.28
RC3H2-201ENST00000335387 FAM208AQ9UK61 1670 aaKnown RBP16.83■□□□□ 0.28
RC3H2-201ENST00000335387 TNRQ92752 1358 aa16.82■□□□□ 0.28
RC3H2-201ENST00000335387 USP6P35125 1406 aa16.82■□□□□ 0.28
RC3H2-201ENST00000335387 PLEKHG3A1L390 1219 aa16.82■□□□□ 0.28
RC3H2-201ENST00000335387 HDGFP51858 240 aaKnown RBP16.82■□□□□ 0.28
RC3H2-201ENST00000335387 EMILIN1Q9Y6C2 1016 aa16.82■□□□□ 0.28
RC3H2-201ENST00000335387 EIF5BO60841 1220 aaKnown RBP16.82■□□□□ 0.28
RC3H2-201ENST00000335387 CHMP5Q9NZZ3 219 aa16.82■□□□□ 0.28
RC3H2-201ENST00000335387 PRR36Q9H6K5 1346 aa16.82■□□□□ 0.28
RC3H2-201ENST00000335387 NME9Q86XW9 330 aa16.81■□□□□ 0.28
RC3H2-201ENST00000335387 SIRT2Q8IXJ6 389 aa16.81■□□□□ 0.28
RC3H2-201ENST00000335387 API5Q9BZZ5 524 aaKnown RBP16.81■□□□□ 0.28
RC3H2-201ENST00000335387 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
RC3H2-201ENST00000335387 FSD2A1L4K1 749 aa16.81■□□□□ 0.28
RC3H2-201ENST00000335387 INTS3Q68E01 1043 aaKnown RBP16.81■□□□□ 0.28
RC3H2-201ENST00000335387 STAG3Q9UJ98 1225 aa16.81■□□□□ 0.28
RC3H2-201ENST00000335387 CIZ1Q9ULV3 898 aaPredicted RBP16.81■□□□□ 0.28
RC3H2-201ENST00000335387 CRB1P82279 1406 aa16.8■□□□□ 0.28
RC3H2-201ENST00000335387 ARHGEF10O15013 1369 aa16.8■□□□□ 0.28
RC3H2-201ENST00000335387 KIF2CQ99661 725 aa16.8■□□□□ 0.28
RC3H2-201ENST00000335387 STRCQ7RTU9 1775 aa16.8■□□□□ 0.28
RC3H2-201ENST00000335387 PIK3C2AO00443 1686 aa16.8■□□□□ 0.28
RC3H2-201ENST00000335387 PTPRUQ92729 1446 aa16.8■□□□□ 0.28
RC3H2-201ENST00000335387 COG3Q96JB2 828 aa16.8■□□□□ 0.28
RC3H2-201ENST00000335387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.79■□□□□ 0.28
RC3H2-201ENST00000335387 TSPYL6Q8N831 410 aa16.79■□□□□ 0.28
RC3H2-201ENST00000335387 KDRP35968 1356 aa16.78■□□□□ 0.28
RC3H2-201ENST00000335387 MCM4P33991 863 aa16.78■□□□□ 0.28
RC3H2-201ENST00000335387 HAP1P54257 671 aaPredicted RBP16.78■□□□□ 0.28
RC3H2-201ENST00000335387 RTL1A6NKG5 1358 aa16.78■□□□□ 0.28
RC3H2-201ENST00000335387 TWISTNBQ3B726 338 aaPredicted RBP16.78■□□□□ 0.28
RC3H2-201ENST00000335387 TTC21BQ7Z4L5 1316 aa16.77■□□□□ 0.28
RC3H2-201ENST00000335387 CHL1O00533 1208 aa16.77■□□□□ 0.27
RC3H2-201ENST00000335387 CLEC17AQ6ZS10 378 aa16.77■□□□□ 0.27
RC3H2-201ENST00000335387 L1TD1Q5T7N2 865 aaKnown RBP16.76■□□□□ 0.27
RC3H2-201ENST00000335387 BRPF3Q9ULD4 1205 aa16.76■□□□□ 0.27
RC3H2-201ENST00000335387 C8orf58Q8NAV2 365 aa16.76■□□□□ 0.27
RC3H2-201ENST00000335387 FBXO41Q8TF61 875 aa16.76■□□□□ 0.27
RC3H2-201ENST00000335387 DCTPP1Q9H773 170 aa16.76■□□□□ 0.27
RC3H2-201ENST00000335387 ISY1Q9ULR0 285 aaKnown RBP16.76■□□□□ 0.27
RC3H2-201ENST00000335387 PHRF1Q9P1Y6 1649 aaKnown RBP16.75■□□□□ 0.27
RC3H2-201ENST00000335387 PTPRCP08575 1304 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms