RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 SLKQ9H2G2 1235 aaPredicted RBP25.79■■□□□ 1.72
SPNS1-203ENST00000334536 SENP3Q9H4L4 574 aaPredicted RBP25.79■■□□□ 1.72
SPNS1-203ENST00000334536 HDAC1Q13547 482 aaPredicted RBP25.78■■□□□ 1.72
SPNS1-203ENST00000334536 SETD1AO15047 1707 aaKnown RBP25.78■■□□□ 1.72
SPNS1-203ENST00000334536 TRAK2O60296 914 aa25.78■■□□□ 1.72
SPNS1-203ENST00000334536 IPO8O15397 1037 aaKnown RBP25.77■■□□□ 1.72
SPNS1-203ENST00000334536 TRIM27P14373 513 aa25.77■■□□□ 1.72
SPNS1-203ENST00000334536 ALDH1L2Q3SY69 923 aa25.77■■□□□ 1.72
SPNS1-203ENST00000334536 UPF2Q9HAU5 1272 aaKnown RBP25.77■■□□□ 1.72
SPNS1-203ENST00000334536 KIF16BQ96L93 1317 aa25.77■■□□□ 1.72
SPNS1-203ENST00000334536 ZNF428Q96B54 188 aa25.76■■□□□ 1.72
SPNS1-203ENST00000334536 SEC24BO95487 1268 aa25.76■■□□□ 1.71
SPNS1-203ENST00000334536 FAM135BQ49AJ0 1406 aa25.76■■□□□ 1.71
SPNS1-203ENST00000334536 MLECQ14165 292 aa25.75■■□□□ 1.71
SPNS1-203ENST00000334536 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.75■■□□□ 1.71
SPNS1-203ENST00000334536 POLKQ9UBT6 870 aa25.75■■□□□ 1.71
SPNS1-203ENST00000334536 LRRC7Q96NW7 1537 aa25.73■■□□□ 1.71
SPNS1-203ENST00000334536 EDC4Q6P2E9 1401 aaKnown RBP25.73■■□□□ 1.71
SPNS1-203ENST00000334536 PPIP5K1Q6PFW1 1433 aa25.73■■□□□ 1.71
SPNS1-203ENST00000334536 BRPF1P55201 1214 aaPredicted RBP25.73■■□□□ 1.71
SPNS1-203ENST00000334536 CHMP5Q9NZZ3 219 aa25.73■■□□□ 1.71
SPNS1-203ENST00000334536 NOB1Q9ULX3 412 aaKnown RBP25.73■■□□□ 1.71
SPNS1-203ENST00000334536 CPSF1Q10570 1443 aaKnown RBP25.72■■□□□ 1.71
SPNS1-203ENST00000334536 WAPLQ7Z5K2 1190 aa25.71■■□□□ 1.71
SPNS1-203ENST00000334536 SIRT1Q96EB6 747 aa25.71■■□□□ 1.71
SPNS1-203ENST00000334536 PTMSP20962 102 aa25.71■■□□□ 1.71
SPNS1-203ENST00000334536 CCDC173Q0VFZ6 552 aa25.71■■□□□ 1.71
SPNS1-203ENST00000334536 ZSCAN30Q86W11 494 aa25.7■■□□□ 1.7
SPNS1-203ENST00000334536 ITPRIPQ8IWB1 547 aa25.7■■□□□ 1.7
SPNS1-203ENST00000334536 TBC1D32Q96NH3 1257 aa25.7■■□□□ 1.7
SPNS1-203ENST00000334536 WASLO00401 505 aaPredicted RBP25.69■■□□□ 1.7
SPNS1-203ENST00000334536 PRKAR2BP31323 418 aa25.69■■□□□ 1.7
SPNS1-203ENST00000334536 NFE2L2Q16236 605 aa25.69■■□□□ 1.7
SPNS1-203ENST00000334536 AATKQ6ZMQ8 1374 aa25.69■■□□□ 1.7
SPNS1-203ENST00000334536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.69■■□□□ 1.7
SPNS1-203ENST00000334536 PPP1R9BQ96SB3 815 aa25.68■■□□□ 1.7
SPNS1-203ENST00000334536 SMC5Q8IY18 1101 aa25.68■■□□□ 1.7
SPNS1-203ENST00000334536 ZBTB40Q9NUA8 1239 aa25.67■■□□□ 1.7
SPNS1-203ENST00000334536 CDK12Q9NYV4 1490 aaPredicted RBP25.67■■□□□ 1.7
SPNS1-203ENST00000334536 NRXN3Q9Y4C0 1643 aa25.66■■□□□ 1.7
SPNS1-203ENST00000334536 ARXQ96QS3 562 aa25.66■■□□□ 1.7
SPNS1-203ENST00000334536 TBC1D2Q9BYX2 928 aa25.66■■□□□ 1.7
SPNS1-203ENST00000334536 TMEM57Q8N5G2 664 aa25.66■■□□□ 1.7
SPNS1-203ENST00000334536 HDGFP51858 240 aaKnown RBP25.64■■□□□ 1.7
SPNS1-203ENST00000334536 HS1BP3Q53T59 392 aa25.64■■□□□ 1.7
SPNS1-203ENST00000334536 CHMP4BQ9H444 224 aaKnown RBP25.64■■□□□ 1.7
SPNS1-203ENST00000334536 KNDC1Q76NI1 1749 aa25.64■■□□□ 1.7
SPNS1-203ENST00000334536 GZF1Q9H116 711 aaPredicted RBP25.64■■□□□ 1.69
SPNS1-203ENST00000334536 TECPR2O15040 1411 aa25.64■■□□□ 1.69
SPNS1-203ENST00000334536 MAP2P11137 1827 aaKnown RBP25.64■■□□□ 1.69
SPNS1-203ENST00000334536 DMTNQ08495 405 aa25.63■■□□□ 1.69
SPNS1-203ENST00000334536 PDIA4P13667 645 aaKnown RBP25.63■■□□□ 1.69
SPNS1-203ENST00000334536 IL13P35225 146 aa25.63■■□□□ 1.69
SPNS1-203ENST00000334536 ARHGAP45Q92619 1136 aa25.63■■□□□ 1.69
SPNS1-203ENST00000334536 DYNC1I1O14576 645 aa25.61■■□□□ 1.69
SPNS1-203ENST00000334536 GNAI1P63096 354 aa25.61■■□□□ 1.69
SPNS1-203ENST00000334536 SKOR2Q2VWA4 1001 aaPredicted RBP25.61■■□□□ 1.69
SPNS1-203ENST00000334536 IFT57Q9NWB7 429 aa25.61■■□□□ 1.69
SPNS1-203ENST00000334536 METP08581 1390 aa25.6■■□□□ 1.69
SPNS1-203ENST00000334536 LMOD3Q0VAK6 560 aa25.59■■□□□ 1.69
SPNS1-203ENST00000334536 NUDT16Q96DE0 195 aaKnown RBP25.59■■□□□ 1.69
SPNS1-203ENST00000334536 MSNP26038 577 aaKnown RBP25.59■■□□□ 1.69
SPNS1-203ENST00000334536 PIK3R4Q99570 1358 aa25.58■■□□□ 1.69
SPNS1-203ENST00000334536 MON2Q7Z3U7 1717 aa25.58■■□□□ 1.69
SPNS1-203ENST00000334536 PHACTR3Q96KR7 559 aa25.58■■□□□ 1.69
SPNS1-203ENST00000334536 ESF1Q9H501 851 aaKnown RBP25.58■■□□□ 1.69
SPNS1-203ENST00000334536 CCDC61Q9Y6R9 512 aa25.58■■□□□ 1.69
SPNS1-203ENST00000334536 CPS1P31327 1500 aa25.58■■□□□ 1.69
SPNS1-203ENST00000334536 ZNF853P0CG23 659 aa25.58■■□□□ 1.68
SPNS1-203ENST00000334536 NME9Q86XW9 330 aa25.58■■□□□ 1.68
SPNS1-203ENST00000334536 COG3Q96JB2 828 aa25.58■■□□□ 1.68
SPNS1-203ENST00000334536 EMILIN1Q9Y6C2 1016 aa25.58■■□□□ 1.68
SPNS1-203ENST00000334536 VAMP4O75379 141 aa25.57■■□□□ 1.68
SPNS1-203ENST00000334536 ZNF692Q9BU19 519 aaPredicted RBP25.57■■□□□ 1.68
SPNS1-203ENST00000334536 PTCH1Q13635 1447 aa25.57■■□□□ 1.68
SPNS1-203ENST00000334536 MRPL50Q8N5N7 158 aaKnown RBP25.56■■□□□ 1.68
SPNS1-203ENST00000334536 IBTKQ9P2D0 1353 aaPredicted RBP25.56■■□□□ 1.68
SPNS1-203ENST00000334536 HMOX1P09601 288 aa25.56■■□□□ 1.68
SPNS1-203ENST00000334536 FBLN1P23142 703 aa25.56■■□□□ 1.68
SPNS1-203ENST00000334536 NUCB1Q02818 461 aa25.56■■□□□ 1.68
SPNS1-203ENST00000334536 ANP32BQ92688 251 aaKnown RBP25.54■■□□□ 1.68
SPNS1-203ENST00000334536 KIF20AO95235 890 aa25.54■■□□□ 1.68
SPNS1-203ENST00000334536 TXNDC2Q86VQ3 553 aa25.54■■□□□ 1.68
SPNS1-203ENST00000334536 AKAP12Q02952 1782 aa25.54■■□□□ 1.68
SPNS1-203ENST00000334536 ZNF500O60304 480 aaPredicted RBP25.53■■□□□ 1.68
SPNS1-203ENST00000334536 FAM13BQ9NYF5 915 aa25.53■■□□□ 1.68
SPNS1-203ENST00000334536 NCOA3Q9Y6Q9 1424 aa25.53■■□□□ 1.68
SPNS1-203ENST00000334536 GTPBP4Q9BZE4 634 aaKnown RBP25.53■■□□□ 1.68
SPNS1-203ENST00000334536 CSPP1Q1MSJ5 1256 aa25.52■■□□□ 1.68
SPNS1-203ENST00000334536 C22orf23Q9BZE7 217 aa25.52■■□□□ 1.68
SPNS1-203ENST00000334536 C3P01024 1663 aa25.52■■□□□ 1.68
SPNS1-203ENST00000334536 ZBTB7BO15156 539 aaPredicted RBP25.51■■□□□ 1.67
SPNS1-203ENST00000334536 BBXQ8WY36 941 aaPredicted RBP25.51■■□□□ 1.67
SPNS1-203ENST00000334536 CFAP44Q96MT7 982 aa25.51■■□□□ 1.67
SPNS1-203ENST00000334536 ITSN1Q15811 1721 aa25.5■■□□□ 1.67
SPNS1-203ENST00000334536 CCDC94Q9BW85 323 aaPredicted RBP25.5■■□□□ 1.67
SPNS1-203ENST00000334536 TNRQ92752 1358 aa25.5■■□□□ 1.67
SPNS1-203ENST00000334536 GCC1Q96CN9 775 aa25.49■■□□□ 1.67
SPNS1-203ENST00000334536 MBIPQ9NS73 344 aa25.49■■□□□ 1.67
SPNS1-203ENST00000334536 CIZ1Q9ULV3 898 aaPredicted RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms