RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 SULT6B1Q6IMI4 303 aa24.02■■□□□ 1.44
RFTN1-201ENST00000334133 C8orf58Q8NAV2 365 aa24.02■■□□□ 1.44
RFTN1-201ENST00000334133 ZBTB40Q9NUA8 1239 aa24.02■■□□□ 1.44
RFTN1-201ENST00000334133 NFKBIBQ15653 356 aa24.02■■□□□ 1.44
RFTN1-201ENST00000334133 ADAMTS13Q76LX8 1427 aa24.02■■□□□ 1.44
RFTN1-201ENST00000334133 CDC42BPGQ6DT37 1551 aa24■■□□□ 1.43
RFTN1-201ENST00000334133 HSP90AB2PQ58FF8 381 aa24■■□□□ 1.43
RFTN1-201ENST00000334133 TTC21BQ7Z4L5 1316 aa24■■□□□ 1.43
RFTN1-201ENST00000334133 EIF4A2Q14240 407 aaKnown RBP24■■□□□ 1.43
RFTN1-201ENST00000334133 KRT24Q2M2I5 525 aa24■■□□□ 1.43
RFTN1-201ENST00000334133 ZNF692Q9BU19 519 aaPredicted RBP24■■□□□ 1.43
RFTN1-201ENST00000334133 GNAI1P63096 354 aa23.99■■□□□ 1.43
RFTN1-201ENST00000334133 TWISTNBQ3B726 338 aaPredicted RBP23.98■■□□□ 1.43
RFTN1-201ENST00000334133 ALDH1L2Q3SY69 923 aa23.98■■□□□ 1.43
RFTN1-201ENST00000334133 LNPKQ9C0E8 428 aa23.98■■□□□ 1.43
RFTN1-201ENST00000334133 CDK12Q9NYV4 1490 aaPredicted RBP23.98■■□□□ 1.43
RFTN1-201ENST00000334133 MRPL50Q8N5N7 158 aaKnown RBP23.97■■□□□ 1.43
RFTN1-201ENST00000334133 UBR1Q8IWV7 1749 aa23.97■■□□□ 1.43
RFTN1-201ENST00000334133 AMOTL2Q9Y2J4 779 aa23.97■■□□□ 1.43
RFTN1-201ENST00000334133 AATKQ6ZMQ8 1374 aa23.97■■□□□ 1.43
RFTN1-201ENST00000334133 TECPR2O15040 1411 aa23.97■■□□□ 1.43
RFTN1-201ENST00000334133 HDAC1Q13547 482 aaPredicted RBP23.97■■□□□ 1.43
RFTN1-201ENST00000334133 MCM10Q7L590 875 aa23.97■■□□□ 1.43
RFTN1-201ENST00000334133 SLKQ9H2G2 1235 aaPredicted RBP23.97■■□□□ 1.43
RFTN1-201ENST00000334133 IFT57Q9NWB7 429 aa23.96■■□□□ 1.43
RFTN1-201ENST00000334133 SIRT1Q96EB6 747 aa23.96■■□□□ 1.43
RFTN1-201ENST00000334133 MFAP1P55081 439 aaKnown RBP23.95■■□□□ 1.42
RFTN1-201ENST00000334133 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.95■■□□□ 1.42
RFTN1-201ENST00000334133 UPF2Q9HAU5 1272 aaKnown RBP23.94■■□□□ 1.42
RFTN1-201ENST00000334133 EID1Q9Y6B2 187 aa23.94■■□□□ 1.42
RFTN1-201ENST00000334133 VIRMAQ69YN4 1812 aaKnown RBP23.94■■□□□ 1.42
RFTN1-201ENST00000334133 PTPRUQ92729 1446 aa23.94■■□□□ 1.42
RFTN1-201ENST00000334133 SPRYD3Q8NCJ5 442 aa23.94■■□□□ 1.42
RFTN1-201ENST00000334133 FRAT2O75474 233 aaPredicted RBP23.94■■□□□ 1.42
RFTN1-201ENST00000334133 ZNF853P0CG23 659 aa23.94■■□□□ 1.42
RFTN1-201ENST00000334133 CALD1Q05682 793 aaKnown RBP23.94■■□□□ 1.42
RFTN1-201ENST00000334133 CFAP44Q96MT7 982 aa23.93■■□□□ 1.42
RFTN1-201ENST00000334133 NUTM2GQ5VZR2 741 aa23.93■■□□□ 1.42
RFTN1-201ENST00000334133 MON2Q7Z3U7 1717 aa23.92■■□□□ 1.42
RFTN1-201ENST00000334133 SMC5Q8IY18 1101 aa23.92■■□□□ 1.42
RFTN1-201ENST00000334133 MIS18AQ9NYP9 233 aa23.92■■□□□ 1.42
RFTN1-201ENST00000334133 USP35Q9P2H5 1018 aa23.91■■□□□ 1.42
RFTN1-201ENST00000334133 ZBTB7BO15156 539 aaPredicted RBP23.91■■□□□ 1.42
RFTN1-201ENST00000334133 ITSN1Q15811 1721 aa23.91■■□□□ 1.42
RFTN1-201ENST00000334133 DLG5Q8TDM6 1919 aa23.91■■□□□ 1.42
RFTN1-201ENST00000334133 TBC1D32Q96NH3 1257 aa23.9■■□□□ 1.42
RFTN1-201ENST00000334133 C3P01024 1663 aa23.9■■□□□ 1.42
RFTN1-201ENST00000334133 NGDNQ8NEJ9 315 aaKnown RBP23.9■■□□□ 1.42
RFTN1-201ENST00000334133 FOXO3O43524 673 aa23.89■■□□□ 1.42
RFTN1-201ENST00000334133 PLEKHG1Q9ULL1 1385 aa23.89■■□□□ 1.42
RFTN1-201ENST00000334133 KNDC1Q76NI1 1749 aa23.89■■□□□ 1.42
RFTN1-201ENST00000334133 LMOD3Q0VAK6 560 aa23.88■■□□□ 1.41
RFTN1-201ENST00000334133 ANKRD45Q5TZF3 282 aa23.88■■□□□ 1.41
RFTN1-201ENST00000334133 RBM33Q96EV2 1170 aaKnown RBP23.88■■□□□ 1.41
RFTN1-201ENST00000334133 AKAP12Q02952 1782 aa23.88■■□□□ 1.41
RFTN1-201ENST00000334133 PLEKHG3A1L390 1219 aa23.87■■□□□ 1.41
RFTN1-201ENST00000334133 USP6P35125 1406 aa23.87■■□□□ 1.41
RFTN1-201ENST00000334133 NUCB1Q02818 461 aa23.85■■□□□ 1.41
RFTN1-201ENST00000334133 MAP3K19Q56UN5 1328 aa23.85■■□□□ 1.41
RFTN1-201ENST00000334133 BECN1Q14457 450 aa23.85■■□□□ 1.41
RFTN1-201ENST00000334133 CHD1LQ86WJ1 897 aa23.85■■□□□ 1.41
RFTN1-201ENST00000334133 SIRT2Q8IXJ6 389 aa23.85■■□□□ 1.41
RFTN1-201ENST00000334133 ZNF428Q96B54 188 aa23.85■■□□□ 1.41
RFTN1-201ENST00000334133 TBC1D2Q9BYX2 928 aa23.84■■□□□ 1.41
RFTN1-201ENST00000334133 OVOS2A0A0J9YW53 1432 aa23.83■■□□□ 1.41
RFTN1-201ENST00000334133 OVOS2Q6IE36 1432 aa23.83■■□□□ 1.41
RFTN1-201ENST00000334133 BRPF1P55201 1214 aaPredicted RBP23.82■■□□□ 1.4
RFTN1-201ENST00000334133 C22orf23Q9BZE7 217 aa23.82■■□□□ 1.4
RFTN1-201ENST00000334133 PLEKHG5O94827 1062 aa23.81■■□□□ 1.4
RFTN1-201ENST00000334133 ARHGAP45Q92619 1136 aa23.81■■□□□ 1.4
RFTN1-201ENST00000334133 ABCC4O15439 1325 aa23.8■■□□□ 1.4
RFTN1-201ENST00000334133 AMPHP49418 695 aa23.8■■□□□ 1.4
RFTN1-201ENST00000334133 KCNA6P17658 529 aa23.79■■□□□ 1.4
RFTN1-201ENST00000334133 TRHP20396 242 aaPredicted RBP23.79■■□□□ 1.4
RFTN1-201ENST00000334133 C14orf37Q86TY3 774 aa23.79■■□□□ 1.4
RFTN1-201ENST00000334133 LTV1Q96GA3 475 aaPredicted RBP23.79■■□□□ 1.4
RFTN1-201ENST00000334133 PTCH1Q13635 1447 aa23.79■■□□□ 1.4
RFTN1-201ENST00000334133 PEAK1Q9H792 1746 aa23.79■■□□□ 1.4
RFTN1-201ENST00000334133 NLRP6P59044 892 aa23.79■■□□□ 1.4
RFTN1-201ENST00000334133 MTHFSDQ2M296 383 aaKnown RBP23.79■■□□□ 1.4
RFTN1-201ENST00000334133 APBB1O00213 710 aa23.77■■□□□ 1.4
RFTN1-201ENST00000334133 RGPD8O14715 1765 aaPredicted RBP23.77■■□□□ 1.4
RFTN1-201ENST00000334133 API5Q9BZZ5 524 aaKnown RBP23.77■■□□□ 1.4
RFTN1-201ENST00000334133 TBX22Q9Y458 520 aa23.77■■□□□ 1.4
RFTN1-201ENST00000334133 CHL1O00533 1208 aa23.76■■□□□ 1.39
RFTN1-201ENST00000334133 THEMISQ8N1K5 641 aaPredicted RBP23.76■■□□□ 1.39
RFTN1-201ENST00000334133 EYA1Q99502 592 aa23.75■■□□□ 1.39
RFTN1-201ENST00000334133 NRKQ7Z2Y5 1582 aa23.75■■□□□ 1.39
RFTN1-201ENST00000334133 GSE1Q14687 1217 aa23.75■■□□□ 1.39
RFTN1-201ENST00000334133 RIMS1Q86UR5 1692 aaKnown RBP23.74■■□□□ 1.39
RFTN1-201ENST00000334133 NECTIN2Q92692 538 aa23.74■■□□□ 1.39
RFTN1-201ENST00000334133 PIK3R4Q99570 1358 aa23.73■■□□□ 1.39
RFTN1-201ENST00000334133 TOPAZ1Q8N9V7 1692 aa23.73■■□□□ 1.39
RFTN1-201ENST00000334133 SLC4A2P04920 1241 aa23.73■■□□□ 1.39
RFTN1-201ENST00000334133 RTF1Q92541 710 aaKnown RBP23.73■■□□□ 1.39
RFTN1-201ENST00000334133 GCC1Q96CN9 775 aa23.72■■□□□ 1.39
RFTN1-201ENST00000334133 TSPYL4Q9UJ04 414 aa23.72■■□□□ 1.39
RFTN1-201ENST00000334133 USP31Q70CQ4 1352 aa23.72■■□□□ 1.39
RFTN1-201ENST00000334133 SSH2Q76I76 1423 aa23.72■■□□□ 1.39
RFTN1-201ENST00000334133 SLC4A10Q6U841 1118 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms