RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 SYAP1Q96A49 352 aaPredicted RBP13.69□□□□□ -0.22
POLR1B-202ENST00000333990 PDE4AP27815 886 aa13.69□□□□□ -0.22
POLR1B-202ENST00000333990 SLKQ9H2G2 1235 aaPredicted RBP13.69□□□□□ -0.22
POLR1B-202ENST00000333990 MLH3Q9UHC1 1453 aa13.68□□□□□ -0.22
POLR1B-202ENST00000333990 FYB1O15117 783 aa13.68□□□□□ -0.22
POLR1B-202ENST00000333990 SLFN5Q08AF3 891 aa13.68□□□□□ -0.22
POLR1B-202ENST00000333990 ZNF652Q9Y2D9 606 aa13.68□□□□□ -0.22
POLR1B-202ENST00000333990 MYL6BP14649 208 aa13.68□□□□□ -0.22
POLR1B-202ENST00000333990 ANKRD24Q8TF21 1146 aa13.68□□□□□ -0.22
POLR1B-202ENST00000333990 TBC1D2BQ9UPU7 963 aa13.68□□□□□ -0.22
POLR1B-202ENST00000333990 MBD5Q9P267 1494 aa13.68□□□□□ -0.22
POLR1B-202ENST00000333990 MAGI3Q5TCQ9 1506 aa13.68□□□□□ -0.22
POLR1B-202ENST00000333990 FBXW7Q969H0 707 aa13.67□□□□□ -0.22
POLR1B-202ENST00000333990 ANO2Q9NQ90 1003 aa13.67□□□□□ -0.22
POLR1B-202ENST00000333990 DUSP27Q5VZP5 1158 aa13.67□□□□□ -0.22
POLR1B-202ENST00000333990 TEX13AQ9BXU3 409 aaPredicted RBP13.67□□□□□ -0.22
POLR1B-202ENST00000333990 CNNM1Q9NRU3 951 aa13.67□□□□□ -0.22
POLR1B-202ENST00000333990 MCM10Q7L590 875 aa13.67□□□□□ -0.22
POLR1B-202ENST00000333990 CNTROBQ8N137 903 aa13.67□□□□□ -0.22
POLR1B-202ENST00000333990 USHBP1Q8N6Y0 703 aa13.67□□□□□ -0.22
POLR1B-202ENST00000333990 GNL3LQ9NVN8 582 aaKnown RBP13.67□□□□□ -0.22
POLR1B-202ENST00000333990 TMEM2Q9UHN6 1383 aa13.66□□□□□ -0.22
POLR1B-202ENST00000333990 CCDC184Q52MB2 194 aa13.66□□□□□ -0.22
POLR1B-202ENST00000333990 FAM184AQ8NB25 1140 aa13.66□□□□□ -0.22
POLR1B-202ENST00000333990 LRRC59Q96AG4 307 aaKnown RBP13.66□□□□□ -0.22
POLR1B-202ENST00000333990 PTCD1O75127 700 aaKnown RBP13.66□□□□□ -0.22
POLR1B-202ENST00000333990 ATP6V1DQ9Y5K8 247 aa13.66□□□□□ -0.22
POLR1B-202ENST00000333990 YEATS2Q9ULM3 1422 aa13.66□□□□□ -0.22
POLR1B-202ENST00000333990 HIP1O00291 1037 aa13.66□□□□□ -0.22
POLR1B-202ENST00000333990 CCDC57Q2TAC2 916 aa13.66□□□□□ -0.22
POLR1B-202ENST00000333990 ALDH1L2Q3SY69 923 aa13.66□□□□□ -0.22
POLR1B-202ENST00000333990 NOL8Q76FK4 1167 aaKnown RBP13.66□□□□□ -0.22
POLR1B-202ENST00000333990 LARP1Q6PKG0 1096 aaKnown RBP13.65□□□□□ -0.22
POLR1B-202ENST00000333990 FMNL2Q96PY5 1086 aa13.65□□□□□ -0.22
POLR1B-202ENST00000333990 NPATQ14207 1427 aa13.65□□□□□ -0.22
POLR1B-202ENST00000333990 BCAR3O75815 825 aa13.65□□□□□ -0.22
POLR1B-202ENST00000333990 MPHOSPH8Q99549 860 aa13.65□□□□□ -0.22
POLR1B-202ENST00000333990 ASXL1Q8IXJ9 1541 aa13.65□□□□□ -0.22
POLR1B-202ENST00000333990 MVPQ14764 893 aaKnown RBP13.65□□□□□ -0.22
POLR1B-202ENST00000333990 WASHC4Q2M389 1173 aa13.64□□□□□ -0.23
POLR1B-202ENST00000333990 IPO9Q96P70 1041 aaKnown RBP13.64□□□□□ -0.23
POLR1B-202ENST00000333990 ABCC1P33527 1531 aa13.64□□□□□ -0.23
POLR1B-202ENST00000333990 ZCCHC11Q5TAX3 1644 aaKnown RBP13.64□□□□□ -0.23
POLR1B-202ENST00000333990 HSP90AB3PQ58FF7 597 aa13.64□□□□□ -0.23
POLR1B-202ENST00000333990 RPAP2Q8IXW5 612 aaPredicted RBP13.64□□□□□ -0.23
POLR1B-202ENST00000333990 TESK2Q96S53 571 aa13.64□□□□□ -0.23
POLR1B-202ENST00000333990 CDC45O75419 566 aa13.64□□□□□ -0.23
POLR1B-202ENST00000333990 CCDC158Q5M9N0 1113 aa13.64□□□□□ -0.23
POLR1B-202ENST00000333990 ADGBQ8N7X0 1667 aa13.64□□□□□ -0.23
POLR1B-202ENST00000333990 ERICH2A1L162 156 aa13.64□□□□□ -0.23
POLR1B-202ENST00000333990 CHRNA2Q15822 529 aa13.64□□□□□ -0.23
POLR1B-202ENST00000333990 AMER1Q5JTC6 1135 aaPredicted RBP13.63□□□□□ -0.23
POLR1B-202ENST00000333990 MPRIPQ6WCQ1 1025 aa13.63□□□□□ -0.23
POLR1B-202ENST00000333990 RALYLQ86SE5 291 aaKnown RBP13.63□□□□□ -0.23
POLR1B-202ENST00000333990 FSD1Q9BTV5 496 aa13.63□□□□□ -0.23
POLR1B-202ENST00000333990 DBF4Q9UBU7 674 aaPredicted RBP13.63□□□□□ -0.23
POLR1B-202ENST00000333990 LMTK3Q96Q04 1460 aa13.63□□□□□ -0.23
POLR1B-202ENST00000333990 H3BQV1 296 aa13.63□□□□□ -0.23
POLR1B-202ENST00000333990 MARCH6O60337 910 aa13.63□□□□□ -0.23
POLR1B-202ENST00000333990 IFFO2Q5TF58 517 aa13.63□□□□□ -0.23
POLR1B-202ENST00000333990 THUMPD2Q9BTF0 503 aaKnown RBP13.63□□□□□ -0.23
POLR1B-202ENST00000333990 FLT4P35916 1363 aa13.63□□□□□ -0.23
POLR1B-202ENST00000333990 CPLX1O14810 134 aa13.62□□□□□ -0.23
POLR1B-202ENST00000333990 SF3A1Q15459 793 aaKnown RBP13.62□□□□□ -0.23
POLR1B-202ENST00000333990 RASSF8Q8NHQ8 419 aa13.62□□□□□ -0.23
POLR1B-202ENST00000333990 SIRT1Q96EB6 747 aa13.62□□□□□ -0.23
POLR1B-202ENST00000333990 IL16Q14005 1332 aa13.62□□□□□ -0.23
POLR1B-202ENST00000333990 DCTN1Q14203 1278 aa13.62□□□□□ -0.23
POLR1B-202ENST00000333990 CEP126Q9P2H0 1117 aa13.62□□□□□ -0.23
POLR1B-202ENST00000333990 CTDP1Q9Y5B0 961 aaPredicted RBP13.62□□□□□ -0.23
POLR1B-202ENST00000333990 CCDC27Q2M243 656 aa13.61□□□□□ -0.23
POLR1B-202ENST00000333990 HYPKQ9NX55 129 aa13.61□□□□□ -0.23
POLR1B-202ENST00000333990 HSP90AB2PQ58FF8 381 aa13.61□□□□□ -0.23
POLR1B-202ENST00000333990 ZPR1O75312 459 aa13.61□□□□□ -0.23
POLR1B-202ENST00000333990 LRRCC1Q9C099 1032 aa13.61□□□□□ -0.23
POLR1B-202ENST00000333990 TRIM29Q14134 588 aa13.6□□□□□ -0.23
POLR1B-202ENST00000333990 L1TD1Q5T7N2 865 aaKnown RBP13.6□□□□□ -0.23
POLR1B-202ENST00000333990 ANO8Q9HCE9 1232 aaPredicted RBP13.6□□□□□ -0.23
POLR1B-202ENST00000333990 SRGAP3O43295 1099 aa13.6□□□□□ -0.23
POLR1B-202ENST00000333990 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.6□□□□□ -0.23
POLR1B-202ENST00000333990 SAMD9LQ8IVG5 1584 aa13.59□□□□□ -0.23
POLR1B-202ENST00000333990 ZFYVE9O95405 1425 aa13.59□□□□□ -0.23
POLR1B-202ENST00000333990 GCP02774 474 aa13.59□□□□□ -0.23
POLR1B-202ENST00000333990 ZCRB1Q8TBF4 217 aaKnown RBP13.59□□□□□ -0.23
POLR1B-202ENST00000333990 MIS18AQ9NYP9 233 aa13.59□□□□□ -0.23
POLR1B-202ENST00000333990 PREX2Q70Z35 1606 aa13.59□□□□□ -0.23
POLR1B-202ENST00000333990 TTC37Q6PGP7 1564 aa13.58□□□□□ -0.23
POLR1B-202ENST00000333990 ARAP3Q8WWN8 1544 aa13.58□□□□□ -0.23
POLR1B-202ENST00000333990 IGHMBP2P38935 993 aaKnown RBP13.58□□□□□ -0.23
POLR1B-202ENST00000333990 TTC39AQ5SRH9 613 aa13.58□□□□□ -0.24
POLR1B-202ENST00000333990 FANCIQ9NVI1 1328 aa13.58□□□□□ -0.24
POLR1B-202ENST00000333990 DNTTIP2Q5QJE6 756 aaKnown RBP13.58□□□□□ -0.24
POLR1B-202ENST00000333990 C1orf115Q9H7X2 142 aa13.58□□□□□ -0.24
POLR1B-202ENST00000333990 POLR3AO14802 1390 aaPredicted RBP13.58□□□□□ -0.24
POLR1B-202ENST00000333990 PSMA5P28066 241 aa13.57□□□□□ -0.24
POLR1B-202ENST00000333990 TPM4P67936 248 aa13.57□□□□□ -0.24
POLR1B-202ENST00000333990 NKTRP30414 1462 aaKnown RBP13.57□□□□□ -0.24
POLR1B-202ENST00000333990 NFXL1Q6ZNB6 911 aa13.57□□□□□ -0.24
POLR1B-202ENST00000333990 POLKQ9UBT6 870 aa13.57□□□□□ -0.24
POLR1B-202ENST00000333990 PDZRN3Q9UPQ7 1066 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms