RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 SMC5Q8IY18 1101 aa13.68□□□□□ -0.22
CCDC172-201ENST00000333254 ARHGAP45Q92619 1136 aa13.68□□□□□ -0.22
CCDC172-201ENST00000333254 NUDT16Q96DE0 195 aaKnown RBP13.68□□□□□ -0.22
CCDC172-201ENST00000333254 BCL2L13Q9BXK5 485 aa13.68□□□□□ -0.22
CCDC172-201ENST00000333254 ESF1Q9H501 851 aaKnown RBP13.68□□□□□ -0.22
CCDC172-201ENST00000333254 ARHGAP23Q9P227 1491 aa13.67□□□□□ -0.22
CCDC172-201ENST00000333254 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
CCDC172-201ENST00000333254 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
CCDC172-201ENST00000333254 OVOS2A0A0J9YW53 1432 aa13.67□□□□□ -0.22
CCDC172-201ENST00000333254 OVOS2Q6IE36 1432 aa13.67□□□□□ -0.22
CCDC172-201ENST00000333254 ZNF853P0CG23 659 aa13.66□□□□□ -0.22
CCDC172-201ENST00000333254 GNAI1P63096 354 aa13.66□□□□□ -0.22
CCDC172-201ENST00000333254 KIF24Q5T7B8 1368 aa13.65□□□□□ -0.22
CCDC172-201ENST00000333254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCDC172-201ENST00000333254 COG3Q96JB2 828 aa13.65□□□□□ -0.22
CCDC172-201ENST00000333254 ZBTB40Q9NUA8 1239 aa13.65□□□□□ -0.22
CCDC172-201ENST00000333254 BECN1Q14457 450 aa13.64□□□□□ -0.23
CCDC172-201ENST00000333254 UPF2Q9HAU5 1272 aaKnown RBP13.64□□□□□ -0.23
CCDC172-201ENST00000333254 NOB1Q9ULX3 412 aaKnown RBP13.64□□□□□ -0.23
CCDC172-201ENST00000333254 LAS1LQ9Y4W2 734 aaKnown RBP13.64□□□□□ -0.23
CCDC172-201ENST00000333254 USP31Q70CQ4 1352 aa13.64□□□□□ -0.23
CCDC172-201ENST00000333254 PLEKHG3A1L390 1219 aa13.63□□□□□ -0.23
CCDC172-201ENST00000333254 XRN1Q8IZH2 1706 aaKnown RBP13.63□□□□□ -0.23
CCDC172-201ENST00000333254 ROBO2Q9HCK4 1378 aa13.63□□□□□ -0.23
CCDC172-201ENST00000333254 SSH2Q76I76 1423 aa13.63□□□□□ -0.23
CCDC172-201ENST00000333254 PEAK1Q9H792 1746 aa13.63□□□□□ -0.23
CCDC172-201ENST00000333254 FER1L4A9Z1Z3 1794 aa13.63□□□□□ -0.23
CCDC172-201ENST00000333254 MLECQ14165 292 aa13.63□□□□□ -0.23
CCDC172-201ENST00000333254 NME9Q86XW9 330 aa13.63□□□□□ -0.23
CCDC172-201ENST00000333254 TBC1D32Q96NH3 1257 aa13.63□□□□□ -0.23
CCDC172-201ENST00000333254 BCL11AQ9H165 835 aa13.63□□□□□ -0.23
CCDC172-201ENST00000333254 PRR36Q9H6K5 1346 aa13.62□□□□□ -0.23
CCDC172-201ENST00000333254 USP6P35125 1406 aa13.62□□□□□ -0.23
CCDC172-201ENST00000333254 TXNDC2Q86VQ3 553 aa13.62□□□□□ -0.23
CCDC172-201ENST00000333254 TMEM57Q8N5G2 664 aa13.62□□□□□ -0.23
CCDC172-201ENST00000333254 EMILIN1Q9Y6C2 1016 aa13.62□□□□□ -0.23
CCDC172-201ENST00000333254 VAMP4O75379 141 aa13.61□□□□□ -0.23
CCDC172-201ENST00000333254 ITPRIPQ8IWB1 547 aa13.61□□□□□ -0.23
CCDC172-201ENST00000333254 CFAP44Q96MT7 982 aa13.61□□□□□ -0.23
CCDC172-201ENST00000333254 HAP1P54257 671 aaPredicted RBP13.6□□□□□ -0.23
CCDC172-201ENST00000333254 NFKBIBQ15653 356 aa13.6□□□□□ -0.23
CCDC172-201ENST00000333254 MRPL50Q8N5N7 158 aaKnown RBP13.6□□□□□ -0.23
CCDC172-201ENST00000333254 PHACTR3Q96KR7 559 aa13.6□□□□□ -0.23
CCDC172-201ENST00000333254 ABCC4O15439 1325 aa13.6□□□□□ -0.23
CCDC172-201ENST00000333254 TTC21BQ7Z4L5 1316 aa13.59□□□□□ -0.23
CCDC172-201ENST00000333254 SEC24BO95487 1268 aa13.59□□□□□ -0.23
CCDC172-201ENST00000333254 TTC21AQ8NDW8 1320 aa13.59□□□□□ -0.23
CCDC172-201ENST00000333254 KIAA0232Q92628 1395 aa13.58□□□□□ -0.24
CCDC172-201ENST00000333254 CACNA1FO60840 1977 aa13.58□□□□□ -0.24
CCDC172-201ENST00000333254 PTPRUQ92729 1446 aa13.57□□□□□ -0.24
CCDC172-201ENST00000333254 NUCB1Q02818 461 aa13.57□□□□□ -0.24
CCDC172-201ENST00000333254 GCC1Q96CN9 775 aa13.57□□□□□ -0.24
CCDC172-201ENST00000333254 LRRC37A3O60309 1634 aa13.57□□□□□ -0.24
CCDC172-201ENST00000333254 ANKARQ7Z5J8 1434 aa13.57□□□□□ -0.24
CCDC172-201ENST00000333254 ARHGEF10O15013 1369 aa13.57□□□□□ -0.24
CCDC172-201ENST00000333254 N4BP2Q86UW6 1770 aaPredicted RBP13.57□□□□□ -0.24
CCDC172-201ENST00000333254 HMOX1P09601 288 aa13.56□□□□□ -0.24
CCDC172-201ENST00000333254 API5Q9BZZ5 524 aaKnown RBP13.56□□□□□ -0.24
CCDC172-201ENST00000333254 MBIPQ9NS73 344 aa13.56□□□□□ -0.24
CCDC172-201ENST00000333254 RGPD8O14715 1765 aaPredicted RBP13.56□□□□□ -0.24
CCDC172-201ENST00000333254 MARF1Q9Y4F3 1742 aaKnown RBP13.56□□□□□ -0.24
CCDC172-201ENST00000333254 ZBTB7BO15156 539 aaPredicted RBP13.56□□□□□ -0.24
CCDC172-201ENST00000333254 TBX22Q9Y458 520 aa13.56□□□□□ -0.24
CCDC172-201ENST00000333254 PIK3C2AO00443 1686 aa13.55□□□□□ -0.24
CCDC172-201ENST00000333254 ACEP12821 1306 aa13.54□□□□□ -0.24
CCDC172-201ENST00000333254 SLC4A3P48751 1232 aa13.54□□□□□ -0.24
CCDC172-201ENST00000333254 TWISTNBQ3B726 338 aaPredicted RBP13.54□□□□□ -0.24
CCDC172-201ENST00000333254 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
CCDC172-201ENST00000333254 KDRP35968 1356 aa13.54□□□□□ -0.24
CCDC172-201ENST00000333254 FBLN1P23142 703 aa13.53□□□□□ -0.24
CCDC172-201ENST00000333254 LTKP29376 864 aa13.53□□□□□ -0.24
CCDC172-201ENST00000333254 EIF4A2Q14240 407 aaKnown RBP13.53□□□□□ -0.24
CCDC172-201ENST00000333254 EID1Q9Y6B2 187 aa13.53□□□□□ -0.24
CCDC172-201ENST00000333254 EIF5BO60841 1220 aaKnown RBP13.53□□□□□ -0.24
CCDC172-201ENST00000333254 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
CCDC172-201ENST00000333254 BMP2KLQ5H9B9 411 aa13.53□□□□□ -0.24
CCDC172-201ENST00000333254 SBNO1A3KN83 1393 aa13.52□□□□□ -0.24
CCDC172-201ENST00000333254 GSE1Q14687 1217 aa13.52□□□□□ -0.25
CCDC172-201ENST00000333254 CHD1LQ86WJ1 897 aa13.52□□□□□ -0.25
CCDC172-201ENST00000333254 ANTXR1Q9H6X2 564 aa13.52□□□□□ -0.25
CCDC172-201ENST00000333254 NCKAP5LQ9HCH0 1330 aa13.51□□□□□ -0.25
CCDC172-201ENST00000333254 CHL1O00533 1208 aa13.51□□□□□ -0.25
CCDC172-201ENST00000333254 TSPYL6Q8N831 410 aa13.51□□□□□ -0.25
CCDC172-201ENST00000333254 FLT4P35916 1363 aa13.51□□□□□ -0.25
CCDC172-201ENST00000333254 RGS12O14924 1447 aa13.51□□□□□ -0.25
CCDC172-201ENST00000333254 RBM25P49756 843 aaKnown RBP13.5□□□□□ -0.25
CCDC172-201ENST00000333254 INTS3Q68E01 1043 aaKnown RBP13.5□□□□□ -0.25
CCDC172-201ENST00000333254 THUMPD2Q9BTF0 503 aaKnown RBP13.5□□□□□ -0.25
CCDC172-201ENST00000333254 C22orf23Q9BZE7 217 aa13.5□□□□□ -0.25
CCDC172-201ENST00000333254 ZNF142P52746 1687 aaPredicted RBP13.5□□□□□ -0.25
CCDC172-201ENST00000333254 CRB1P82279 1406 aa13.5□□□□□ -0.25
CCDC172-201ENST00000333254 TBC1D2Q9BYX2 928 aa13.5□□□□□ -0.25
CCDC172-201ENST00000333254 FAM208AQ9UK61 1670 aaKnown RBP13.49□□□□□ -0.25
CCDC172-201ENST00000333254 PTPRCP08575 1304 aa13.49□□□□□ -0.25
CCDC172-201ENST00000333254 NCOA3Q9Y6Q9 1424 aa13.49□□□□□ -0.25
CCDC172-201ENST00000333254 CHD2O14647 1828 aaKnown RBP13.49□□□□□ -0.25
CCDC172-201ENST00000333254 C8orf58Q8NAV2 365 aa13.49□□□□□ -0.25
CCDC172-201ENST00000333254 CEP170BQ9Y4F5 1589 aaPredicted RBP13.48□□□□□ -0.25
CCDC172-201ENST00000333254 PHRF1Q9P1Y6 1649 aaKnown RBP13.48□□□□□ -0.25
CCDC172-201ENST00000333254 RTL1A6NKG5 1358 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms