RNA–Protein interactions for RNA: ENST00000332512.7

RIPK4-201, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK4, Length 3,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-201ENST00000332512 TRIM35Q9UPQ4 493 aa16.39■□□□□ 0.21
RIPK4-201ENST00000332512 TEFQ10587 303 aa16.38■□□□□ 0.21
RIPK4-201ENST00000332512 TRMT2AQ8IZ69 625 aaKnown RBP16.38■□□□□ 0.21
RIPK4-201ENST00000332512 ITSN2Q9NZM3 1697 aa16.38■□□□□ 0.21
RIPK4-201ENST00000332512 GNAI2P04899 355 aa16.38■□□□□ 0.21
RIPK4-201ENST00000332512 UQCRHLA0A096LP55 91 aa16.38■□□□□ 0.21
RIPK4-201ENST00000332512 UQCRHP07919 91 aa16.38■□□□□ 0.21
RIPK4-201ENST00000332512 SDSP20132 328 aa16.38■□□□□ 0.21
RIPK4-201ENST00000332512 FERMT3Q86UX7 667 aa16.38■□□□□ 0.21
RIPK4-201ENST00000332512 CLCN1P35523 988 aa16.37■□□□□ 0.21
RIPK4-201ENST00000332512 PRDM10Q9NQV6 1147 aa16.37■□□□□ 0.21
RIPK4-201ENST00000332512 CWC27Q6UX04 472 aaKnown RBP16.37■□□□□ 0.21
RIPK4-201ENST00000332512 GAS2L3Q86XJ1 694 aa16.37■□□□□ 0.21
RIPK4-201ENST00000332512 ZNF830Q96NB3 372 aaPredicted RBP16.37■□□□□ 0.21
RIPK4-201ENST00000332512 CD2BP2O95400 341 aaKnown RBP16.37■□□□□ 0.21
RIPK4-201ENST00000332512 CEBPZQ03701 1054 aaKnown RBP16.37■□□□□ 0.21
RIPK4-201ENST00000332512 MBD5Q9P267 1494 aa16.37■□□□□ 0.21
RIPK4-201ENST00000332512 FAM69CQ0P6D2 419 aa16.36■□□□□ 0.21
RIPK4-201ENST00000332512 ALDH1L2Q3SY69 923 aa16.36■□□□□ 0.21
RIPK4-201ENST00000332512 PLA2R1Q13018 1463 aa16.36■□□□□ 0.21
RIPK4-201ENST00000332512 VAMP4O75379 141 aa16.36■□□□□ 0.21
RIPK4-201ENST00000332512 LRRCC1Q9C099 1032 aa16.36■□□□□ 0.21
RIPK4-201ENST00000332512 IFIT2P09913 472 aaKnown RBP16.36■□□□□ 0.21
RIPK4-201ENST00000332512 NUDT16Q96DE0 195 aaKnown RBP16.36■□□□□ 0.21
RIPK4-201ENST00000332512 TSPY26PQ9H489 355 aa16.36■□□□□ 0.21
RIPK4-201ENST00000332512 STK3Q13188 491 aa16.35■□□□□ 0.21
RIPK4-201ENST00000332512 PRIM1P49642 420 aaKnown RBP16.35■□□□□ 0.21
RIPK4-201ENST00000332512 POLKQ9UBT6 870 aa16.35■□□□□ 0.21
RIPK4-201ENST00000332512 BICD2Q8TD16 824 aa16.35■□□□□ 0.21
RIPK4-201ENST00000332512 ADGRL1O94910 1474 aa16.34■□□□□ 0.21
RIPK4-201ENST00000332512 PKP1Q13835 747 aa16.34■□□□□ 0.21
RIPK4-201ENST00000332512 SIL1Q9H173 461 aa16.34■□□□□ 0.21
RIPK4-201ENST00000332512 RBM33Q96EV2 1170 aaKnown RBP16.34■□□□□ 0.21
RIPK4-201ENST00000332512 RTEL1-TNFRSF6BF6WH68 1400 aa16.34■□□□□ 0.21
RIPK4-201ENST00000332512 KDM4AO75164 1064 aa16.33■□□□□ 0.21
RIPK4-201ENST00000332512 ZSCAN23Q3MJ62 389 aa16.33■□□□□ 0.21
RIPK4-201ENST00000332512 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.21
RIPK4-201ENST00000332512 ANTXR1Q9H6X2 564 aa16.33■□□□□ 0.21
RIPK4-201ENST00000332512 H3BQV1 296 aa16.33■□□□□ 0.2
RIPK4-201ENST00000332512 ANXA1P04083 346 aa16.33■□□□□ 0.2
RIPK4-201ENST00000332512 IFFO2Q5TF58 517 aa16.33■□□□□ 0.2
RIPK4-201ENST00000332512 ZMYND15Q9H091 742 aa16.33■□□□□ 0.2
RIPK4-201ENST00000332512 WDR7Q9Y4E6 1490 aa16.33■□□□□ 0.2
RIPK4-201ENST00000332512 CSB-PGBD3P0DP91 1061 aa16.33■□□□□ 0.2
RIPK4-201ENST00000332512 USHBP1Q8N6Y0 703 aa16.33■□□□□ 0.2
RIPK4-201ENST00000332512 UBE2Q2Q8WVN8 375 aa16.33■□□□□ 0.2
RIPK4-201ENST00000332512 USP25Q9UHP3 1055 aa16.33■□□□□ 0.2
RIPK4-201ENST00000332512 NUP160Q12769 1436 aa16.32■□□□□ 0.2
RIPK4-201ENST00000332512 ZBTB7BO15156 539 aaPredicted RBP16.32■□□□□ 0.2
RIPK4-201ENST00000332512 SRGAP3O43295 1099 aa16.32■□□□□ 0.2
RIPK4-201ENST00000332512 ZKSCAN1P17029 563 aaPredicted RBP16.32■□□□□ 0.2
RIPK4-201ENST00000332512 HSP90AB2PQ58FF8 381 aa16.32■□□□□ 0.2
RIPK4-201ENST00000332512 RPAP2Q8IXW5 612 aaPredicted RBP16.32■□□□□ 0.2
RIPK4-201ENST00000332512 MRPL50Q8N5N7 158 aaKnown RBP16.32■□□□□ 0.2
RIPK4-201ENST00000332512 GPATCH3Q96I76 525 aa16.32■□□□□ 0.2
RIPK4-201ENST00000332512 IFT57Q9NWB7 429 aa16.32■□□□□ 0.2
RIPK4-201ENST00000332512 SLC52A1Q9NWF4 448 aa16.32■□□□□ 0.2
RIPK4-201ENST00000332512 NPHP1O15259 732 aa16.32■□□□□ 0.2
RIPK4-201ENST00000332512 PPFIA3O75145 1194 aa16.32■□□□□ 0.2
RIPK4-201ENST00000332512 MBD3O95983 291 aa16.32■□□□□ 0.2
RIPK4-201ENST00000332512 RAB3GAP1Q15042 981 aa16.32■□□□□ 0.2
RIPK4-201ENST00000332512 CCDC39Q9UFE4 941 aa16.32■□□□□ 0.2
RIPK4-201ENST00000332512 TTC22Q5TAA0 569 aa16.32■□□□□ 0.2
RIPK4-201ENST00000332512 RRP9O43818 475 aaKnown RBP16.31■□□□□ 0.2
RIPK4-201ENST00000332512 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
RIPK4-201ENST00000332512 CWC22Q9HCG8 908 aaKnown RBP16.31■□□□□ 0.2
RIPK4-201ENST00000332512 CCDC61Q9Y6R9 512 aa16.31■□□□□ 0.2
RIPK4-201ENST00000332512 FOXO3O43524 673 aa16.31■□□□□ 0.2
RIPK4-201ENST00000332512 TPM2P07951 284 aa16.31■□□□□ 0.2
RIPK4-201ENST00000332512 SPG7Q9UQ90 795 aa16.31■□□□□ 0.2
RIPK4-201ENST00000332512 A0A1W2PP64 1363 aa16.31■□□□□ 0.2
RIPK4-201ENST00000332512 GNAI3P08754 354 aa16.31■□□□□ 0.2
RIPK4-201ENST00000332512 KLHL40Q2TBA0 621 aa16.31■□□□□ 0.2
RIPK4-201ENST00000332512 ISY1Q9ULR0 285 aaKnown RBP16.31■□□□□ 0.2
RIPK4-201ENST00000332512 PLCH2O75038 1416 aa16.3■□□□□ 0.2
RIPK4-201ENST00000332512 ATP6V1DQ9Y5K8 247 aa16.3■□□□□ 0.2
RIPK4-201ENST00000332512 FANCAO15360 1455 aa16.3■□□□□ 0.2
RIPK4-201ENST00000332512 LRRIQ1Q96JM4 1722 aa16.3■□□□□ 0.2
RIPK4-201ENST00000332512 CAMK4Q16566 473 aa16.3■□□□□ 0.2
RIPK4-201ENST00000332512 PLEKHM2Q8IWE5 1019 aa16.3■□□□□ 0.2
RIPK4-201ENST00000332512 FAM184AQ8NB25 1140 aa16.3■□□□□ 0.2
RIPK4-201ENST00000332512 ABCC10Q5T3U5 1492 aa16.3■□□□□ 0.2
RIPK4-201ENST00000332512 SHANK2Q9UPX8 1470 aa16.3■□□□□ 0.2
RIPK4-201ENST00000332512 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
RIPK4-201ENST00000332512 LRRFIP2Q9Y608 721 aaKnown RBP16.3■□□□□ 0.2
RIPK4-201ENST00000332512 MX1P20591 662 aa16.29■□□□□ 0.2
RIPK4-201ENST00000332512 CSPP1Q1MSJ5 1256 aa16.29■□□□□ 0.2
RIPK4-201ENST00000332512 CCDC30Q5VVM6 783 aa16.29■□□□□ 0.2
RIPK4-201ENST00000332512 TMX3Q96JJ7 454 aa16.29■□□□□ 0.2
RIPK4-201ENST00000332512 EID1Q9Y6B2 187 aa16.29■□□□□ 0.2
RIPK4-201ENST00000332512 RPGRIP1LQ68CZ1 1315 aa16.29■□□□□ 0.2
RIPK4-201ENST00000332512 BECN2A8MW95 431 aa16.28■□□□□ 0.2
RIPK4-201ENST00000332512 GOLGA6L6A8MZA4 724 aa16.28■□□□□ 0.2
RIPK4-201ENST00000332512 CCDC83Q8IWF9 413 aa16.28■□□□□ 0.2
RIPK4-201ENST00000332512 ANKRD36BQ8N2N9 1353 aa16.28■□□□□ 0.2
RIPK4-201ENST00000332512 ABTB2Q8N961 1025 aa16.28■□□□□ 0.2
RIPK4-201ENST00000332512 DUOX2Q9NRD8 1548 aa16.28■□□□□ 0.2
RIPK4-201ENST00000332512 ABCC11Q96J66 1382 aa16.27■□□□□ 0.2
RIPK4-201ENST00000332512 CLASRPQ8N2M8 674 aaKnown RBP16.27■□□□□ 0.2
RIPK4-201ENST00000332512 TCEANC2Q96MN5 208 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms