RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 AAMPQ13685 434 aa11.9□□□□□ -0.5
CSGALNACT1-201ENST00000332246 C14orf93Q9H972 538 aaKnown RBP11.9□□□□□ -0.5
CSGALNACT1-201ENST00000332246 GNAI2P04899 355 aa11.89□□□□□ -0.51
CSGALNACT1-201ENST00000332246 HSP90AB2PQ58FF8 381 aa11.89□□□□□ -0.51
CSGALNACT1-201ENST00000332246 ZNF830Q96NB3 372 aaPredicted RBP11.89□□□□□ -0.51
CSGALNACT1-201ENST00000332246 SRGAP3O43295 1099 aa11.89□□□□□ -0.51
CSGALNACT1-201ENST00000332246 FAM184AQ8NB25 1140 aa11.89□□□□□ -0.51
CSGALNACT1-201ENST00000332246 FOXO3O43524 673 aa11.89□□□□□ -0.51
CSGALNACT1-201ENST00000332246 JARID2Q92833 1246 aaPredicted RBP11.89□□□□□ -0.51
CSGALNACT1-201ENST00000332246 NEUROD6Q96NK8 337 aa11.89□□□□□ -0.51
CSGALNACT1-201ENST00000332246 FMNL2Q96PY5 1086 aa11.89□□□□□ -0.51
CSGALNACT1-201ENST00000332246 NUP160Q12769 1436 aa11.88□□□□□ -0.51
CSGALNACT1-201ENST00000332246 BAG4O95429 457 aaKnown RBP11.88□□□□□ -0.51
CSGALNACT1-201ENST00000332246 SF3A1Q15459 793 aaKnown RBP11.88□□□□□ -0.51
CSGALNACT1-201ENST00000332246 PRDM10Q9NQV6 1147 aa11.88□□□□□ -0.51
CSGALNACT1-201ENST00000332246 GPATCH3Q96I76 525 aa11.88□□□□□ -0.51
CSGALNACT1-201ENST00000332246 TCEANC2Q96MN5 208 aa11.88□□□□□ -0.51
CSGALNACT1-201ENST00000332246 PSME1Q06323 249 aa11.88□□□□□ -0.51
CSGALNACT1-201ENST00000332246 LRRCC1Q9C099 1032 aa11.88□□□□□ -0.51
CSGALNACT1-201ENST00000332246 ZKSCAN1P17029 563 aaPredicted RBP11.87□□□□□ -0.51
CSGALNACT1-201ENST00000332246 CEBPAP49715 358 aaPredicted RBP11.87□□□□□ -0.51
CSGALNACT1-201ENST00000332246 SPG7Q9UQ90 795 aa11.87□□□□□ -0.51
CSGALNACT1-201ENST00000332246 C1orf141Q5JVX7 400 aa11.87□□□□□ -0.51
CSGALNACT1-201ENST00000332246 RTEL1-TNFRSF6BF6WH68 1400 aa11.87□□□□□ -0.51
CSGALNACT1-201ENST00000332246 TAF7LQ5H9L4 462 aa11.87□□□□□ -0.51
CSGALNACT1-201ENST00000332246 SDSP20132 328 aa11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 CAMK4Q16566 473 aa11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 CCDC61Q9Y6R9 512 aa11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 BECN2A8MW95 431 aa11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 PHF14O94880 888 aa11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 MYL6BP14649 208 aa11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 NUCB1Q02818 461 aa11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 G3BP1Q13283 466 aaKnown RBP eCLIP11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 CCDC85AQ96PX6 553 aaPredicted RBP11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 DNAJC2Q99543 621 aaKnown RBP11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 ZBTB40Q9NUA8 1239 aa11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 ASXL1Q8IXJ9 1541 aa11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 POLKQ9UBT6 870 aa11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 LRRFIP2Q9Y608 721 aaKnown RBP11.86□□□□□ -0.51
CSGALNACT1-201ENST00000332246 MAGI2Q86UL8 1455 aa11.85□□□□□ -0.51
CSGALNACT1-201ENST00000332246 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.85□□□□□ -0.51
CSGALNACT1-201ENST00000332246 CLASRPQ8N2M8 674 aaKnown RBP11.85□□□□□ -0.51
CSGALNACT1-201ENST00000332246 FSD1Q9BTV5 496 aa11.85□□□□□ -0.51
CSGALNACT1-201ENST00000332246 FAM177BA6PVY3 158 aa11.85□□□□□ -0.51
CSGALNACT1-201ENST00000332246 CCDC173Q0VFZ6 552 aa11.85□□□□□ -0.51
CSGALNACT1-201ENST00000332246 RIC3Q7Z5B4 369 aa11.85□□□□□ -0.51
CSGALNACT1-201ENST00000332246 VAMP4O75379 141 aa11.85□□□□□ -0.51
CSGALNACT1-201ENST00000332246 TRIM35Q9UPQ4 493 aa11.85□□□□□ -0.51
CSGALNACT1-201ENST00000332246 CEP170Q5SW79 1584 aa11.85□□□□□ -0.51
CSGALNACT1-201ENST00000332246 GNAI3P08754 354 aa11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 BMP2KLQ5H9B9 411 aa11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 CCDC30Q5VVM6 783 aa11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 CCDC83Q8IWF9 413 aa11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 TSPY26PQ9H489 355 aa11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 NLRP2Q9NX02 1062 aa11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 USP25Q9UHP3 1055 aa11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 CCAR2Q8N163 923 aaKnown RBP11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 DDX11Q96FC9 970 aa11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 COL17A1Q9UMD9 1497 aaPredicted RBP11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 UQCRHLA0A096LP55 91 aa11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 GOLGA6L19H0YKK7 550 aa11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 UQCRHP07919 91 aa11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 SLC52A1Q9NWF4 448 aa11.84□□□□□ -0.51
CSGALNACT1-201ENST00000332246 CT47B1P0C2W7 299 aaPredicted RBP11.83□□□□□ -0.52
CSGALNACT1-201ENST00000332246 JAKMIP1Q96N16 626 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT1-201ENST00000332246 CPA1P15085 419 aa11.83□□□□□ -0.52
CSGALNACT1-201ENST00000332246 CHMP4CQ96CF2 233 aa11.83□□□□□ -0.52
CSGALNACT1-201ENST00000332246 NINLQ9Y2I6 1382 aa11.83□□□□□ -0.52
CSGALNACT1-201ENST00000332246 CD2BP2O95400 341 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT1-201ENST00000332246 HDAC1Q13547 482 aaPredicted RBP11.83□□□□□ -0.52
CSGALNACT1-201ENST00000332246 PKP1Q13835 747 aa11.83□□□□□ -0.52
CSGALNACT1-201ENST00000332246 TFIP11Q9UBB9 837 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT1-201ENST00000332246 ATP2B1P20020 1258 aa11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 PRIM1P49642 420 aaKnown RBP11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 TAF7Q15545 349 aaPredicted RBP11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 G2E3Q7L622 706 aa11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 TRIM5Q9C035 493 aa11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 APPP05067 770 aa11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 MX1P20591 662 aa11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 ESCO1Q5FWF5 840 aa11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 ZSCAN30Q86W11 494 aa11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 RPAP2Q8IXW5 612 aaPredicted RBP11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 CCDC8Q9H0W5 538 aaPredicted RBP11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 DNMT1P26358 1616 aaKnown RBP11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 ADGRL1O94910 1474 aa11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 SMC5Q8IY18 1101 aa11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 RUFY2Q8WXA3 655 aa11.82□□□□□ -0.52
CSGALNACT1-201ENST00000332246 CASTP20810 708 aaKnown RBP11.81□□□□□ -0.52
CSGALNACT1-201ENST00000332246 SRCIN1Q9C0H9 1055 aa11.81□□□□□ -0.52
CSGALNACT1-201ENST00000332246 ATP6V1DQ9Y5K8 247 aa11.81□□□□□ -0.52
CSGALNACT1-201ENST00000332246 BCORL1Q5H9F3 1711 aa11.81□□□□□ -0.52
CSGALNACT1-201ENST00000332246 GOLGA6L6A8MZA4 724 aa11.81□□□□□ -0.52
CSGALNACT1-201ENST00000332246 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
CSGALNACT1-201ENST00000332246 PRPF40BQ6NWY9 871 aaKnown RBP11.81□□□□□ -0.52
CSGALNACT1-201ENST00000332246 MRPL50Q8N5N7 158 aaKnown RBP11.81□□□□□ -0.52
CSGALNACT1-201ENST00000332246 BOLA2Q9H3K6 86 aa11.81□□□□□ -0.52
CSGALNACT1-201ENST00000332246 CIZ1Q9ULV3 898 aaPredicted RBP11.81□□□□□ -0.52
CSGALNACT1-201ENST00000332246 UHRF1BP1Q6BDS2 1440 aa11.81□□□□□ -0.52
CSGALNACT1-201ENST00000332246 NEXNQ0ZGT2 675 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms