RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 NPC1L1Q9UHC9 1359 aa11.71□□□□□ -0.54
SS18L1-201ENST00000331758 KDM5DQ9BY66 1539 aa11.71□□□□□ -0.54
SS18L1-201ENST00000331758 BTBD11A6QL63 1104 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 REC8O95072 547 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 CDC42BPBQ9Y5S2 1711 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 LTKP29376 864 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 EIF4A2Q14240 407 aaKnown RBP11.7□□□□□ -0.54
SS18L1-201ENST00000331758 ALDH1L2Q3SY69 923 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 TNNQ9UQP3 1299 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 DMRT2Q9Y5R5 561 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 MAGI2Q86UL8 1455 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 KRT28Q7Z3Y7 464 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 DIAPH3Q9NSV4 1193 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 TBX22Q9Y458 520 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 TRPM2O94759 1503 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 PRDM15P57071 1507 aaPredicted RBP11.7□□□□□ -0.54
SS18L1-201ENST00000331758 F6X3S4 739 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 MPRIPQ6WCQ1 1025 aa11.7□□□□□ -0.54
SS18L1-201ENST00000331758 CCT4P50991 539 aaKnown RBP11.69□□□□□ -0.54
SS18L1-201ENST00000331758 SRCIN1Q9C0H9 1055 aa11.69□□□□□ -0.54
SS18L1-201ENST00000331758 IGHDP01880 384 aa11.69□□□□□ -0.54
SS18L1-201ENST00000331758 CHD1LQ86WJ1 897 aa11.69□□□□□ -0.54
SS18L1-201ENST00000331758 GOLGA6L4A6NEF3 574 aa11.68□□□□□ -0.54
SS18L1-201ENST00000331758 MYL6BP14649 208 aa11.68□□□□□ -0.54
SS18L1-201ENST00000331758 INTS3Q68E01 1043 aaKnown RBP11.68□□□□□ -0.54
SS18L1-201ENST00000331758 TAF7Q15545 349 aaPredicted RBP11.68□□□□□ -0.54
SS18L1-201ENST00000331758 CDC45O75419 566 aa11.68□□□□□ -0.54
SS18L1-201ENST00000331758 CCDC27Q2M243 656 aa11.68□□□□□ -0.54
SS18L1-201ENST00000331758 SPG7Q9UQ90 795 aa11.68□□□□□ -0.54
SS18L1-201ENST00000331758 TSPOAP1O95153 1857 aa11.68□□□□□ -0.54
SS18L1-201ENST00000331758 CABP4P57796 275 aa11.68□□□□□ -0.54
SS18L1-201ENST00000331758 HSP90AB4PQ58FF6 505 aa11.67□□□□□ -0.54
SS18L1-201ENST00000331758 CLASP1Q7Z460 1538 aa11.67□□□□□ -0.54
SS18L1-201ENST00000331758 IL16Q14005 1332 aa11.67□□□□□ -0.54
SS18L1-201ENST00000331758 TTC21AQ8NDW8 1320 aa11.67□□□□□ -0.54
SS18L1-201ENST00000331758 PTMAP06454 111 aaKnown RBP11.67□□□□□ -0.54
SS18L1-201ENST00000331758 PLXNC1O60486 1568 aa11.67□□□□□ -0.54
SS18L1-201ENST00000331758 HSPA2P54652 639 aa11.66□□□□□ -0.54
SS18L1-201ENST00000331758 CLASRPQ8N2M8 674 aaKnown RBP11.66□□□□□ -0.54
SS18L1-201ENST00000331758 RBM42Q9BTD8 480 aaKnown RBP11.66□□□□□ -0.54
SS18L1-201ENST00000331758 CFAP74Q9C0B2 1584 aa11.66□□□□□ -0.54
SS18L1-201ENST00000331758 TMEM2Q9UHN6 1383 aa11.66□□□□□ -0.54
SS18L1-201ENST00000331758 ZRSR1Q15695 479 aaKnown RBP11.66□□□□□ -0.54
SS18L1-201ENST00000331758 FOXD4L6Q3SYB3 417 aaPredicted RBP11.66□□□□□ -0.54
SS18L1-201ENST00000331758 FOXD4L3Q6VB84 417 aaPredicted RBP11.66□□□□□ -0.54
SS18L1-201ENST00000331758 PCDHB15Q9Y5E8 787 aa11.66□□□□□ -0.54
SS18L1-201ENST00000331758 SBNO2Q9Y2G9 1366 aa11.66□□□□□ -0.54
SS18L1-201ENST00000331758 RLBP1P12271 317 aa11.66□□□□□ -0.54
SS18L1-201ENST00000331758 CHRNA2Q15822 529 aa11.66□□□□□ -0.54
SS18L1-201ENST00000331758 EXOC6BQ9Y2D4 811 aa11.66□□□□□ -0.54
SS18L1-201ENST00000331758 C8orf58Q8NAV2 365 aa11.65□□□□□ -0.54
SS18L1-201ENST00000331758 ERVK-7P63135 1459 aa11.65□□□□□ -0.54
SS18L1-201ENST00000331758 TSPYL6Q8N831 410 aa11.65□□□□□ -0.54
SS18L1-201ENST00000331758 MAP3K19Q56UN5 1328 aa11.65□□□□□ -0.54
SS18L1-201ENST00000331758 HECW2Q9P2P5 1572 aa11.65□□□□□ -0.54
SS18L1-201ENST00000331758 KRT24Q2M2I5 525 aa11.64□□□□□ -0.55
SS18L1-201ENST00000331758 RPAP2Q8IXW5 612 aaPredicted RBP11.64□□□□□ -0.55
SS18L1-201ENST00000331758 NEUROD6Q96NK8 337 aa11.64□□□□□ -0.55
SS18L1-201ENST00000331758 RUFY2Q8WXA3 655 aa11.64□□□□□ -0.55
SS18L1-201ENST00000331758 IL1RAPL2Q9NP60 686 aa11.64□□□□□ -0.55
SS18L1-201ENST00000331758 ARAP3Q8WWN8 1544 aa11.64□□□□□ -0.55
SS18L1-201ENST00000331758 NUTM2BA6NNL0 878 aaPredicted RBP11.64□□□□□ -0.55
SS18L1-201ENST00000331758 NUTM2EB1AL46 878 aaPredicted RBP11.64□□□□□ -0.55
SS18L1-201ENST00000331758 SRGAP3O43295 1099 aa11.64□□□□□ -0.55
SS18L1-201ENST00000331758 HSP90B1P14625 803 aaKnown RBP11.64□□□□□ -0.55
SS18L1-201ENST00000331758 NUTM2AQ8IVF1 878 aaPredicted RBP11.64□□□□□ -0.55
SS18L1-201ENST00000331758 RSPH6AQ9H0K4 717 aa11.64□□□□□ -0.55
SS18L1-201ENST00000331758 IQGAP3Q86VI3 1631 aa11.64□□□□□ -0.55
SS18L1-201ENST00000331758 PTCD1O75127 700 aaKnown RBP11.63□□□□□ -0.55
SS18L1-201ENST00000331758 L1TD1Q5T7N2 865 aaKnown RBP11.63□□□□□ -0.55
SS18L1-201ENST00000331758 METP08581 1390 aa11.63□□□□□ -0.55
SS18L1-201ENST00000331758 ERC2O15083 957 aa11.63□□□□□ -0.55
SS18L1-201ENST00000331758 FRAT2O75474 233 aaPredicted RBP11.63□□□□□ -0.55
SS18L1-201ENST00000331758 AMOTQ4VCS5 1084 aa11.63□□□□□ -0.55
SS18L1-201ENST00000331758 CADPS2Q86UW7 1296 aa11.63□□□□□ -0.55
SS18L1-201ENST00000331758 ANKRD24Q8TF21 1146 aa11.63□□□□□ -0.55
SS18L1-201ENST00000331758 NAP1L5Q96NT1 182 aaPredicted RBP11.63□□□□□ -0.55
SS18L1-201ENST00000331758 EYA1Q99502 592 aa11.63□□□□□ -0.55
SS18L1-201ENST00000331758 LRRCC1Q9C099 1032 aa11.63□□□□□ -0.55
SS18L1-201ENST00000331758 SIL1Q9H173 461 aa11.63□□□□□ -0.55
SS18L1-201ENST00000331758 ANXA1P04083 346 aa11.62□□□□□ -0.55
SS18L1-201ENST00000331758 MTHFSDQ2M296 383 aaKnown RBP11.62□□□□□ -0.55
SS18L1-201ENST00000331758 FAM177BA6PVY3 158 aa11.62□□□□□ -0.55
SS18L1-201ENST00000331758 SMARCA5O60264 1052 aaPredicted RBP11.62□□□□□ -0.55
SS18L1-201ENST00000331758 LRRC59Q96AG4 307 aaKnown RBP11.62□□□□□ -0.55
SS18L1-201ENST00000331758 CROCC2H7BZ55 1655 aa11.62□□□□□ -0.55
SS18L1-201ENST00000331758 MYOM2P54296 1465 aa11.62□□□□□ -0.55
SS18L1-201ENST00000331758 FLIIQ13045 1269 aa11.62□□□□□ -0.55
SS18L1-201ENST00000331758 CHMP5Q9NZZ3 219 aa11.62□□□□□ -0.55
SS18L1-201ENST00000331758 NFKBIBQ15653 356 aa11.61□□□□□ -0.55
SS18L1-201ENST00000331758 CABLES1Q8TDN4 633 aa11.61□□□□□ -0.55
SS18L1-201ENST00000331758 IL13P35225 146 aa11.61□□□□□ -0.55
SS18L1-201ENST00000331758 ABCC3O15438 1527 aa11.61□□□□□ -0.55
SS18L1-201ENST00000331758 VAMP4O75379 141 aa11.61□□□□□ -0.55
SS18L1-201ENST00000331758 ZKSCAN1P17029 563 aaPredicted RBP11.61□□□□□ -0.55
SS18L1-201ENST00000331758 TOMM22Q9NS69 142 aa11.61□□□□□ -0.55
SS18L1-201ENST00000331758 TET3O43151 1660 aa11.61□□□□□ -0.55
SS18L1-201ENST00000331758 FLT4P35916 1363 aa11.61□□□□□ -0.55
SS18L1-201ENST00000331758 EFCAB6Q5THR3 1501 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms