RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 TBC1D9Q6ZT07 1266 aa22.54■■□□□ 1.2
NPLOC4-201ENST00000331134 UNC13AQ9UPW8 1703 aa22.54■■□□□ 1.2
NPLOC4-201ENST00000331134 CLCN1P35523 988 aa22.54■■□□□ 1.2
NPLOC4-201ENST00000331134 BRPF1P55201 1214 aaPredicted RBP22.54■■□□□ 1.2
NPLOC4-201ENST00000331134 MAP3K1Q13233 1512 aa22.53■■□□□ 1.2
NPLOC4-201ENST00000331134 SRGAP3O43295 1099 aa22.53■■□□□ 1.2
NPLOC4-201ENST00000331134 STK38Q15208 465 aa22.52■■□□□ 1.2
NPLOC4-201ENST00000331134 CDK19Q9BWU1 502 aa22.52■■□□□ 1.2
NPLOC4-201ENST00000331134 NUP62CLQ9H1M0 184 aa22.52■■□□□ 1.2
NPLOC4-201ENST00000331134 TXNDC2Q86VQ3 553 aa22.51■■□□□ 1.19
NPLOC4-201ENST00000331134 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
NPLOC4-201ENST00000331134 CCDC70Q6NSX1 233 aa22.51■■□□□ 1.19
NPLOC4-201ENST00000331134 CCDC83Q8IWF9 413 aa22.51■■□□□ 1.19
NPLOC4-201ENST00000331134 VPS53Q5VIR6 699 aa22.51■■□□□ 1.19
NPLOC4-201ENST00000331134 TSHZ3Q63HK5 1081 aa22.51■■□□□ 1.19
NPLOC4-201ENST00000331134 DDX11Q96FC9 970 aa22.51■■□□□ 1.19
NPLOC4-201ENST00000331134 ANKRD20A12PQ8NF67 263 aa22.51■■□□□ 1.19
NPLOC4-201ENST00000331134 SPATA32Q96LK8 384 aa22.5■■□□□ 1.19
NPLOC4-201ENST00000331134 ZNF830Q96NB3 372 aaPredicted RBP22.5■■□□□ 1.19
NPLOC4-201ENST00000331134 NCAPD3P42695 1498 aa22.5■■□□□ 1.19
NPLOC4-201ENST00000331134 F6X3S4 739 aa22.5■■□□□ 1.19
NPLOC4-201ENST00000331134 SETQ01105 290 aaPredicted RBP22.5■■□□□ 1.19
NPLOC4-201ENST00000331134 LRRFIP1Q32MZ4 808 aaKnown RBP22.5■■□□□ 1.19
NPLOC4-201ENST00000331134 OLFM4Q6UX06 510 aa22.5■■□□□ 1.19
NPLOC4-201ENST00000331134 TROQ12816 1431 aaPredicted RBP22.5■■□□□ 1.19
NPLOC4-201ENST00000331134 PTPRKQ15262 1439 aa22.5■■□□□ 1.19
NPLOC4-201ENST00000331134 RPAP2Q8IXW5 612 aaPredicted RBP22.49■■□□□ 1.19
NPLOC4-201ENST00000331134 PCF11O94913 1555 aaKnown RBP22.49■■□□□ 1.19
NPLOC4-201ENST00000331134 MCM10Q7L590 875 aa22.49■■□□□ 1.19
NPLOC4-201ENST00000331134 TRERF1Q96PN7 1200 aa22.49■■□□□ 1.19
NPLOC4-201ENST00000331134 SPDYE4A6NLX3 237 aa22.49■■□□□ 1.19
NPLOC4-201ENST00000331134 RRAGDQ9NQL2 400 aaPredicted RBP22.49■■□□□ 1.19
NPLOC4-201ENST00000331134 HOOK1Q9UJC3 728 aaKnown RBP22.49■■□□□ 1.19
NPLOC4-201ENST00000331134 DISP3Q9P2K9 1392 aa22.49■■□□□ 1.19
NPLOC4-201ENST00000331134 CASTP20810 708 aaKnown RBP22.48■■□□□ 1.19
NPLOC4-201ENST00000331134 GPRASP1Q5JY77 1395 aa22.48■■□□□ 1.19
NPLOC4-201ENST00000331134 CCT4P50991 539 aaKnown RBP22.48■■□□□ 1.19
NPLOC4-201ENST00000331134 SAFBQ15424 915 aaKnown RBP eCLIP22.48■■□□□ 1.19
NPLOC4-201ENST00000331134 RPRD2Q5VT52 1461 aaKnown RBP22.48■■□□□ 1.19
NPLOC4-201ENST00000331134 BLOC1S2Q6QNY1 142 aa22.47■■□□□ 1.19
NPLOC4-201ENST00000331134 CKAP2LQ8IYA6 745 aa22.47■■□□□ 1.19
NPLOC4-201ENST00000331134 PDRG1Q9NUG6 133 aa22.47■■□□□ 1.19
NPLOC4-201ENST00000331134 ARHGAP5Q13017 1502 aa22.47■■□□□ 1.19
NPLOC4-201ENST00000331134 SERPINC1P01008 464 aa22.47■■□□□ 1.19
NPLOC4-201ENST00000331134 FCHSD2O94868 740 aa22.47■■□□□ 1.19
NPLOC4-201ENST00000331134 PSME1Q06323 249 aa22.47■■□□□ 1.19
NPLOC4-201ENST00000331134 NFE2L2Q16236 605 aa22.47■■□□□ 1.19
NPLOC4-201ENST00000331134 ABCC5O15440 1437 aa22.47■■□□□ 1.19
NPLOC4-201ENST00000331134 SCAPERQ9BY12 1400 aa22.47■■□□□ 1.19
NPLOC4-201ENST00000331134 RLBP1P12271 317 aa22.46■■□□□ 1.19
NPLOC4-201ENST00000331134 C16orf45Q96MC5 204 aaPredicted RBP22.46■■□□□ 1.19
NPLOC4-201ENST00000331134 SRCIN1Q9C0H9 1055 aa22.46■■□□□ 1.19
NPLOC4-201ENST00000331134 NAP1L1P55209 391 aaKnown RBP22.46■■□□□ 1.19
NPLOC4-201ENST00000331134 EFCAB5A4FU69 1503 aa22.46■■□□□ 1.19
NPLOC4-201ENST00000331134 NESP48681 1621 aa22.45■■□□□ 1.18
NPLOC4-201ENST00000331134 FBLN1P23142 703 aa22.45■■□□□ 1.18
NPLOC4-201ENST00000331134 MTMR7Q9Y216 660 aa22.45■■□□□ 1.18
NPLOC4-201ENST00000331134 KLHL40Q2TBA0 621 aa22.44■■□□□ 1.18
NPLOC4-201ENST00000331134 MAP3K11Q16584 847 aa22.44■■□□□ 1.18
NPLOC4-201ENST00000331134 AEBP1Q8IUX7 1158 aa22.43■■□□□ 1.18
NPLOC4-201ENST00000331134 GAS2L2Q8NHY3 880 aa22.43■■□□□ 1.18
NPLOC4-201ENST00000331134 BMP2KLQ5H9B9 411 aa22.43■■□□□ 1.18
NPLOC4-201ENST00000331134 HCLS1P14317 486 aaPredicted RBP22.43■■□□□ 1.18
NPLOC4-201ENST00000331134 AACSQ86V21 672 aa22.43■■□□□ 1.18
NPLOC4-201ENST00000331134 MX1P20591 662 aa22.42■■□□□ 1.18
NPLOC4-201ENST00000331134 ZSCAN23Q3MJ62 389 aa22.42■■□□□ 1.18
NPLOC4-201ENST00000331134 CEP89Q96ST8 783 aa22.42■■□□□ 1.18
NPLOC4-201ENST00000331134 RUFY1Q96T51 708 aa22.42■■□□□ 1.18
NPLOC4-201ENST00000331134 NLRP2Q9NX02 1062 aa22.42■■□□□ 1.18
NPLOC4-201ENST00000331134 TRMT1Q9NXH9 659 aaKnown RBP22.42■■□□□ 1.18
NPLOC4-201ENST00000331134 TFIP11Q9UBB9 837 aaKnown RBP22.42■■□□□ 1.18
NPLOC4-201ENST00000331134 EPRSP07814 1512 aaKnown RBP22.42■■□□□ 1.18
NPLOC4-201ENST00000331134 RAD21O60216 631 aa22.42■■□□□ 1.18
NPLOC4-201ENST00000331134 FYB1O15117 783 aa22.41■■□□□ 1.18
NPLOC4-201ENST00000331134 PRPF40BQ6NWY9 871 aaKnown RBP22.41■■□□□ 1.18
NPLOC4-201ENST00000331134 SPINK5Q9NQ38 1064 aaPredicted RBP22.41■■□□□ 1.18
NPLOC4-201ENST00000331134 ADCY5O95622 1261 aa22.41■■□□□ 1.18
NPLOC4-201ENST00000331134 CGNQ9P2M7 1197 aaKnown RBP22.4■■□□□ 1.18
NPLOC4-201ENST00000331134 CYB5RLQ6IPT4 315 aa22.4■■□□□ 1.18
NPLOC4-201ENST00000331134 CAGE1Q8TC20 777 aa22.39■■□□□ 1.18
NPLOC4-201ENST00000331134 POLA1P09884 1462 aaPredicted RBP22.39■■□□□ 1.18
NPLOC4-201ENST00000331134 DHX16O60231 1041 aaKnown RBP22.39■■□□□ 1.17
NPLOC4-201ENST00000331134 PPFIA3O75145 1194 aa22.39■■□□□ 1.17
NPLOC4-201ENST00000331134 RRP12Q5JTH9 1297 aaKnown RBP22.39■■□□□ 1.17
NPLOC4-201ENST00000331134 PPP4R3BQ5MIZ7 849 aa22.39■■□□□ 1.17
NPLOC4-201ENST00000331134 RAPGEF4Q8WZA2 1011 aa22.39■■□□□ 1.17
NPLOC4-201ENST00000331134 H0YHG0 523 aa22.39■■□□□ 1.17
NPLOC4-201ENST00000331134 ABTB2Q8N961 1025 aa22.39■■□□□ 1.17
NPLOC4-201ENST00000331134 SYTL4Q96C24 671 aaPredicted RBP22.39■■□□□ 1.17
NPLOC4-201ENST00000331134 ZNF396Q96N95 335 aaPredicted RBP22.39■■□□□ 1.17
NPLOC4-201ENST00000331134 ERICH2A1L162 156 aa22.39■■□□□ 1.17
NPLOC4-201ENST00000331134 CCDC183Q5T5S1 534 aa22.39■■□□□ 1.17
NPLOC4-201ENST00000331134 SUPT6HQ7KZ85 1726 aaKnown RBP22.38■■□□□ 1.17
NPLOC4-201ENST00000331134 ADGRF5Q8IZF2 1346 aa22.38■■□□□ 1.17
NPLOC4-201ENST00000331134 EMILIN1Q9Y6C2 1016 aa22.38■■□□□ 1.17
NPLOC4-201ENST00000331134 NOM1Q5C9Z4 860 aaKnown RBP22.38■■□□□ 1.17
NPLOC4-201ENST00000331134 AXDND1Q5T1B0 1012 aaPredicted RBP22.38■■□□□ 1.17
NPLOC4-201ENST00000331134 ACBD3Q9H3P7 528 aa22.38■■□□□ 1.17
NPLOC4-201ENST00000331134 IGSF3O75054 1194 aa22.37■■□□□ 1.17
NPLOC4-201ENST00000331134 SPG7Q9UQ90 795 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms