RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.26□□□□□ -0.77
SKA2-201ENST00000330137 CBX1P83916 185 aa10.26□□□□□ -0.77
SKA2-201ENST00000330137 CHAF1AQ13111 956 aaPredicted RBP10.26□□□□□ -0.77
SKA2-201ENST00000330137 DNTTIP2Q5QJE6 756 aaKnown RBP10.26□□□□□ -0.77
SKA2-201ENST00000330137 ZBTB40Q9NUA8 1239 aa10.26□□□□□ -0.77
SKA2-201ENST00000330137 ABCC11Q96J66 1382 aa10.25□□□□□ -0.77
SKA2-201ENST00000330137 SBNO2Q9Y2G9 1366 aa10.25□□□□□ -0.77
SKA2-201ENST00000330137 DNAJC2Q99543 621 aaKnown RBP10.25□□□□□ -0.77
SKA2-201ENST00000330137 TSPY26PQ9H489 355 aa10.25□□□□□ -0.77
SKA2-201ENST00000330137 IL16Q14005 1332 aa10.25□□□□□ -0.77
SKA2-201ENST00000330137 IPO8O15397 1037 aaKnown RBP10.25□□□□□ -0.77
SKA2-201ENST00000330137 PTMAP06454 111 aaKnown RBP10.25□□□□□ -0.77
SKA2-201ENST00000330137 BRPF1P55201 1214 aaPredicted RBP10.25□□□□□ -0.77
SKA2-201ENST00000330137 ATP2B3Q16720 1220 aa10.25□□□□□ -0.77
SKA2-201ENST00000330137 ZNF428Q96B54 188 aa10.25□□□□□ -0.77
SKA2-201ENST00000330137 BCL11BQ9C0K0 894 aaPredicted RBP10.25□□□□□ -0.77
SKA2-201ENST00000330137 MYOM2P54296 1465 aa10.24□□□□□ -0.77
SKA2-201ENST00000330137 ATAD2Q6PL18 1390 aa10.24□□□□□ -0.77
SKA2-201ENST00000330137 ATF7IPQ6VMQ6 1270 aa10.24□□□□□ -0.77
SKA2-201ENST00000330137 GPT2Q8TD30 523 aa10.24□□□□□ -0.77
SKA2-201ENST00000330137 MED14O60244 1454 aa10.24□□□□□ -0.77
SKA2-201ENST00000330137 MYO3AQ8NEV4 1616 aa10.24□□□□□ -0.77
SKA2-201ENST00000330137 ARAP3Q8WWN8 1544 aa10.24□□□□□ -0.77
SKA2-201ENST00000330137 CDC45O75419 566 aa10.24□□□□□ -0.77
SKA2-201ENST00000330137 BCL2L12Q9HB09 334 aa10.24□□□□□ -0.77
SKA2-201ENST00000330137 ANKRD36BQ8N2N9 1353 aa10.23□□□□□ -0.77
SKA2-201ENST00000330137 NOS1P29475 1434 aa10.23□□□□□ -0.77
SKA2-201ENST00000330137 CNKSR2Q8WXI2 1034 aa10.23□□□□□ -0.77
SKA2-201ENST00000330137 CD2BP2O95400 341 aaKnown RBP10.23□□□□□ -0.77
SKA2-201ENST00000330137 CDK11BP21127 795 aaKnown RBP10.23□□□□□ -0.77
SKA2-201ENST00000330137 TCP11L2Q8N4U5 519 aa10.23□□□□□ -0.77
SKA2-201ENST00000330137 CDC42BPBQ9Y5S2 1711 aa10.23□□□□□ -0.77
SKA2-201ENST00000330137 PREX2Q70Z35 1606 aa10.22□□□□□ -0.77
SKA2-201ENST00000330137 ZNF518AQ6AHZ1 1483 aa10.22□□□□□ -0.77
SKA2-201ENST00000330137 ST18O60284 1047 aa10.22□□□□□ -0.77
SKA2-201ENST00000330137 TBC1D9Q6ZT07 1266 aa10.22□□□□□ -0.77
SKA2-201ENST00000330137 TMEM63CQ9P1W3 806 aa10.22□□□□□ -0.77
SKA2-201ENST00000330137 PRPF40AO75400 957 aaKnown RBP10.21□□□□□ -0.77
SKA2-201ENST00000330137 TRIM27P14373 513 aa10.21□□□□□ -0.77
SKA2-201ENST00000330137 MCM2P49736 904 aa10.21□□□□□ -0.77
SKA2-201ENST00000330137 ALDH1L2Q3SY69 923 aa10.21□□□□□ -0.77
SKA2-201ENST00000330137 SYCE3A1L190 88 aa10.2□□□□□ -0.78
SKA2-201ENST00000330137 CGNQ9P2M7 1197 aaKnown RBP10.2□□□□□ -0.78
SKA2-201ENST00000330137 RGL3Q3MIN7 710 aa10.2□□□□□ -0.78
SKA2-201ENST00000330137 CALCOCO1Q9P1Z2 691 aa10.2□□□□□ -0.78
SKA2-201ENST00000330137 USP25Q9UHP3 1055 aa10.2□□□□□ -0.78
SKA2-201ENST00000330137 TNNQ9UQP3 1299 aa10.2□□□□□ -0.78
SKA2-201ENST00000330137 MORC2Q9Y6X9 1032 aaPredicted RBP10.2□□□□□ -0.78
SKA2-201ENST00000330137 ZNF771Q7L3S4 317 aaPredicted RBP10.2□□□□□ -0.78
SKA2-201ENST00000330137 AFAP1Q8N556 730 aa10.2□□□□□ -0.78
SKA2-201ENST00000330137 CFAP53Q96M91 514 aa10.2□□□□□ -0.78
SKA2-201ENST00000330137 PIK3R4Q99570 1358 aa10.2□□□□□ -0.78
SKA2-201ENST00000330137 ERVK-7P63135 1459 aa10.2□□□□□ -0.78
SKA2-201ENST00000330137 TRPM2O94759 1503 aa10.2□□□□□ -0.78
SKA2-201ENST00000330137 NSD2O96028 1365 aa10.19□□□□□ -0.78
SKA2-201ENST00000330137 ITPRIPQ8IWB1 547 aa10.19□□□□□ -0.78
SKA2-201ENST00000330137 RICTORQ6R327 1708 aa10.19□□□□□ -0.78
SKA2-201ENST00000330137 TIGD1Q96MW7 591 aa10.19□□□□□ -0.78
SKA2-201ENST00000330137 SMC4Q9NTJ3 1288 aa10.19□□□□□ -0.78
SKA2-201ENST00000330137 FRMPD1Q5SYB0 1578 aa10.18□□□□□ -0.78
SKA2-201ENST00000330137 KIF24Q5T7B8 1368 aa10.18□□□□□ -0.78
SKA2-201ENST00000330137 HNRNPMP52272 730 aaKnown RBP eCLIP10.18□□□□□ -0.78
SKA2-201ENST00000330137 KIAA1524Q8TCG1 905 aa10.18□□□□□ -0.78
SKA2-201ENST00000330137 ARHGAP45Q92619 1136 aa10.18□□□□□ -0.78
SKA2-201ENST00000330137 DDX41Q9UJV9 622 aaKnown RBP10.18□□□□□ -0.78
SKA2-201ENST00000330137 GOLGA6L6A8MZA4 724 aa10.18□□□□□ -0.78
SKA2-201ENST00000330137 TULP2O00295 520 aa10.18□□□□□ -0.78
SKA2-201ENST00000330137 INTS4Q96HW7 963 aaKnown RBP10.18□□□□□ -0.78
SKA2-201ENST00000330137 SAMD9LQ8IVG5 1584 aa10.18□□□□□ -0.78
SKA2-201ENST00000330137 POGZQ7Z3K3 1410 aa10.17□□□□□ -0.78
SKA2-201ENST00000330137 SLFN14P0C7P3 912 aa10.17□□□□□ -0.78
SKA2-201ENST00000330137 TMEM87AQ8NBN3 555 aa10.17□□□□□ -0.78
SKA2-201ENST00000330137 USP26Q9BXU7 913 aa10.17□□□□□ -0.78
SKA2-201ENST00000330137 ABCA6Q8N139 1617 aa10.17□□□□□ -0.78
SKA2-201ENST00000330137 INTS3Q68E01 1043 aaKnown RBP10.17□□□□□ -0.78
SKA2-201ENST00000330137 LNPKQ9C0E8 428 aa10.17□□□□□ -0.78
SKA2-201ENST00000330137 CTNNA3Q9UI47 895 aa10.17□□□□□ -0.78
SKA2-201ENST00000330137 ZDHHC9Q9Y397 364 aa10.17□□□□□ -0.78
SKA2-201ENST00000330137 TRAPPC8Q9Y2L5 1435 aa10.17□□□□□ -0.78
SKA2-201ENST00000330137 BRD1O95696 1058 aa10.16□□□□□ -0.78
SKA2-201ENST00000330137 ARID3AQ99856 593 aa10.16□□□□□ -0.78
SKA2-201ENST00000330137 PAXBP1Q9Y5B6 917 aa10.16□□□□□ -0.78
SKA2-201ENST00000330137 PPIP5K1Q6PFW1 1433 aa10.16□□□□□ -0.78
SKA2-201ENST00000330137 INO80Q9ULG1 1556 aaPredicted RBP10.16□□□□□ -0.78
SKA2-201ENST00000330137 IRX5P78411 483 aaPredicted RBP10.16□□□□□ -0.78
SKA2-201ENST00000330137 MLECQ14165 292 aa10.16□□□□□ -0.78
SKA2-201ENST00000330137 CASC1Q6TDU7 716 aa10.16□□□□□ -0.78
SKA2-201ENST00000330137 PUS7Q96PZ0 661 aaKnown RBP10.16□□□□□ -0.78
SKA2-201ENST00000330137 RBM27Q9P2N5 1060 aaKnown RBP10.16□□□□□ -0.78
SKA2-201ENST00000330137 PTPRTO14522 1441 aa10.16□□□□□ -0.78
SKA2-201ENST00000330137 ZFYVE16Q7Z3T8 1539 aa10.16□□□□□ -0.78
SKA2-201ENST00000330137 SYCP2Q9BX26 1530 aa10.16□□□□□ -0.78
SKA2-201ENST00000330137 AK9Q5TCS8 1911 aa10.16□□□□□ -0.78
SKA2-201ENST00000330137 TERF2Q15554 542 aa10.15□□□□□ -0.78
SKA2-201ENST00000330137 CARD14Q9BXL6 1004 aa10.15□□□□□ -0.78
SKA2-201ENST00000330137 FAM53CQ9NYF3 392 aa10.15□□□□□ -0.78
SKA2-201ENST00000330137 ABCC1P33527 1531 aa10.15□□□□□ -0.78
SKA2-201ENST00000330137 SMTNL1A8MU46 457 aa10.15□□□□□ -0.78
SKA2-201ENST00000330137 TMEM57Q8N5G2 664 aa10.15□□□□□ -0.78
SKA2-201ENST00000330137 RBM42Q9BTD8 480 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms