RNA–Protein interactions for RNA: ENST00000327359.7

BRF1-201, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-201ENST00000327359 CCDC61Q9Y6R9 512 aa20.11■□□□□ 0.81
BRF1-201ENST00000327359 TECPR2O15040 1411 aa20.11■□□□□ 0.81
BRF1-201ENST00000327359 ATP7BP35670 1465 aa20.11■□□□□ 0.81
BRF1-201ENST00000327359 NME9Q86XW9 330 aa20.11■□□□□ 0.81
BRF1-201ENST00000327359 NCOA3Q9Y6Q9 1424 aa20.11■□□□□ 0.81
BRF1-201ENST00000327359 KNDC1Q76NI1 1749 aa20.11■□□□□ 0.81
BRF1-201ENST00000327359 CCDC27Q2M243 656 aa20.1■□□□□ 0.81
BRF1-201ENST00000327359 ZKSCAN2Q63HK3 967 aa20.1■□□□□ 0.81
BRF1-201ENST00000327359 FTSJ3Q8IY81 847 aaKnown RBP20.1■□□□□ 0.81
BRF1-201ENST00000327359 ANKRD26Q9UPS8 1709 aa20.1■□□□□ 0.81
BRF1-201ENST00000327359 KIF20BQ96Q89 1820 aa20.1■□□□□ 0.81
BRF1-201ENST00000327359 ESPNB1AK53 854 aa20.1■□□□□ 0.81
BRF1-201ENST00000327359 DDIT3P35638 169 aa20.1■□□□□ 0.81
BRF1-201ENST00000327359 DZIP1LQ8IYY4 767 aaKnown RBP20.1■□□□□ 0.81
BRF1-201ENST00000327359 THEMISQ8N1K5 641 aaPredicted RBP20.1■□□□□ 0.81
BRF1-201ENST00000327359 CPS1P31327 1500 aa20.1■□□□□ 0.81
BRF1-201ENST00000327359 PRR36Q9H6K5 1346 aa20.09■□□□□ 0.81
BRF1-201ENST00000327359 AMOTL2Q9Y2J4 779 aa20.09■□□□□ 0.81
BRF1-201ENST00000327359 MED14O60244 1454 aa20.09■□□□□ 0.81
BRF1-201ENST00000327359 PTPRUQ92729 1446 aa20.08■□□□□ 0.8
BRF1-201ENST00000327359 DIAPH1O60610 1272 aaKnown RBP20.07■□□□□ 0.8
BRF1-201ENST00000327359 CPSF1Q10570 1443 aaKnown RBP20.07■□□□□ 0.8
BRF1-201ENST00000327359 HDAC1Q13547 482 aaPredicted RBP20.06■□□□□ 0.8
BRF1-201ENST00000327359 POLKQ9UBT6 870 aa20.06■□□□□ 0.8
BRF1-201ENST00000327359 ISY1Q9ULR0 285 aaKnown RBP20.06■□□□□ 0.8
BRF1-201ENST00000327359 GAS2L3Q86XJ1 694 aa20.05■□□□□ 0.8
BRF1-201ENST00000327359 TNPO1Q92973 898 aaKnown RBP20.05■□□□□ 0.8
BRF1-201ENST00000327359 COL3A1P02461 1466 aaPredicted RBP20.05■□□□□ 0.8
BRF1-201ENST00000327359 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.05■□□□□ 0.8
BRF1-201ENST00000327359 EDC4Q6P2E9 1401 aaKnown RBP20.04■□□□□ 0.8
BRF1-201ENST00000327359 TRIM27P14373 513 aa20.04■□□□□ 0.8
BRF1-201ENST00000327359 TSR2Q969E8 191 aaKnown RBP20.04■□□□□ 0.8
BRF1-201ENST00000327359 SLIT1O75093 1534 aa20.03■□□□□ 0.8
BRF1-201ENST00000327359 TBX22Q9Y458 520 aa20.03■□□□□ 0.8
BRF1-201ENST00000327359 EMILIN1Q9Y6C2 1016 aa20.03■□□□□ 0.8
BRF1-201ENST00000327359 ARHGAP23Q9P227 1491 aa20.03■□□□□ 0.8
BRF1-201ENST00000327359 RBM25P49756 843 aaKnown RBP20.02■□□□□ 0.8
BRF1-201ENST00000327359 ITPRIPQ8IWB1 547 aa20.02■□□□□ 0.8
BRF1-201ENST00000327359 PLEKHF1Q96S99 279 aa20.02■□□□□ 0.8
BRF1-201ENST00000327359 SMC4Q9NTJ3 1288 aa20.02■□□□□ 0.8
BRF1-201ENST00000327359 SMC5Q8IY18 1101 aa20.02■□□□□ 0.8
BRF1-201ENST00000327359 SNX21Q969T3 373 aa20.02■□□□□ 0.8
BRF1-201ENST00000327359 COG3Q96JB2 828 aa20.02■□□□□ 0.8
BRF1-201ENST00000327359 ADGRB2O60241 1585 aa20.02■□□□□ 0.79
BRF1-201ENST00000327359 CDC42BPGQ6DT37 1551 aa20.01■□□□□ 0.79
BRF1-201ENST00000327359 TRIM44Q96DX7 344 aaPredicted RBP20.01■□□□□ 0.79
BRF1-201ENST00000327359 DDX19BQ9UMR2 479 aa20■□□□□ 0.79
BRF1-201ENST00000327359 ACEP12821 1306 aa20■□□□□ 0.79
BRF1-201ENST00000327359 TMPOP42166 694 aaKnown RBP20■□□□□ 0.79
BRF1-201ENST00000327359 EXOSC9Q06265 439 aaKnown RBP20■□□□□ 0.79
BRF1-201ENST00000327359 RRS1Q15050 365 aaKnown RBP20■□□□□ 0.79
BRF1-201ENST00000327359 MAP2P11137 1827 aaKnown RBP20■□□□□ 0.79
BRF1-201ENST00000327359 PNPLA6Q8IY17 1366 aa19.99■□□□□ 0.79
BRF1-201ENST00000327359 SSH1Q8WYL5 1049 aa19.99■□□□□ 0.79
BRF1-201ENST00000327359 RIMS1Q86UR5 1692 aaKnown RBP19.99■□□□□ 0.79
BRF1-201ENST00000327359 CALD1Q05682 793 aaKnown RBP19.99■□□□□ 0.79
BRF1-201ENST00000327359 RAB3GAP1Q15042 981 aa19.99■□□□□ 0.79
BRF1-201ENST00000327359 PDCL3Q9H2J4 239 aa19.99■□□□□ 0.79
BRF1-201ENST00000327359 HSP90AB1P08238 724 aaKnown RBP19.98■□□□□ 0.79
BRF1-201ENST00000327359 GBP4Q96PP9 640 aa19.98■□□□□ 0.79
BRF1-201ENST00000327359 HMOX1P09601 288 aa19.97■□□□□ 0.79
BRF1-201ENST00000327359 CT47B1P0C2W7 299 aaPredicted RBP19.97■□□□□ 0.79
BRF1-201ENST00000327359 NCBP3Q53F19 620 aaKnown RBP19.97■□□□□ 0.79
BRF1-201ENST00000327359 ATF7IPQ6VMQ6 1270 aa19.97■□□□□ 0.79
BRF1-201ENST00000327359 CIZ1Q9ULV3 898 aaPredicted RBP19.97■□□□□ 0.79
BRF1-201ENST00000327359 ITSN1Q15811 1721 aa19.97■□□□□ 0.79
BRF1-201ENST00000327359 TPM2P07951 284 aa19.96■□□□□ 0.79
BRF1-201ENST00000327359 RIPK4P57078 832 aa19.96■□□□□ 0.79
BRF1-201ENST00000327359 TMEM57Q8N5G2 664 aa19.96■□□□□ 0.79
BRF1-201ENST00000327359 NOB1Q9ULX3 412 aaKnown RBP19.96■□□□□ 0.79
BRF1-201ENST00000327359 MON2Q7Z3U7 1717 aa19.96■□□□□ 0.79
BRF1-201ENST00000327359 PRKAR2BP31323 418 aa19.95■□□□□ 0.78
BRF1-201ENST00000327359 LNPKQ9C0E8 428 aa19.95■□□□□ 0.78
BRF1-201ENST00000327359 TRIM35Q9UPQ4 493 aa19.95■□□□□ 0.78
BRF1-201ENST00000327359 TTC21BQ7Z4L5 1316 aa19.95■□□□□ 0.78
BRF1-201ENST00000327359 AKAP12Q02952 1782 aa19.95■□□□□ 0.78
BRF1-201ENST00000327359 CD2BP2O95400 341 aaKnown RBP19.95■□□□□ 0.78
BRF1-201ENST00000327359 KCNA6P17658 529 aa19.95■□□□□ 0.78
BRF1-201ENST00000327359 NUCB1Q02818 461 aa19.95■□□□□ 0.78
BRF1-201ENST00000327359 KIF2CQ99661 725 aa19.95■□□□□ 0.78
BRF1-201ENST00000327359 FOXD4L1Q9NU39 408 aa19.95■□□□□ 0.78
BRF1-201ENST00000327359 ZBTB40Q9NUA8 1239 aa19.95■□□□□ 0.78
BRF1-201ENST00000327359 SKOR2Q2VWA4 1001 aaPredicted RBP19.94■□□□□ 0.78
BRF1-201ENST00000327359 CEP170BQ9Y4F5 1589 aaPredicted RBP19.94■□□□□ 0.78
BRF1-201ENST00000327359 PLEKHG3A1L390 1219 aa19.93■□□□□ 0.78
BRF1-201ENST00000327359 SOX12O15370 315 aa19.93■□□□□ 0.78
BRF1-201ENST00000327359 FCHSD2O94868 740 aa19.93■□□□□ 0.78
BRF1-201ENST00000327359 PRDM4Q9UKN5 801 aa19.92■□□□□ 0.78
BRF1-201ENST00000327359 IL13P35225 146 aa19.91■□□□□ 0.78
BRF1-201ENST00000327359 RBM33Q96EV2 1170 aaKnown RBP19.91■□□□□ 0.78
BRF1-201ENST00000327359 CHD1LQ86WJ1 897 aa19.9■□□□□ 0.78
BRF1-201ENST00000327359 ANKLE2Q86XL3 938 aa19.9■□□□□ 0.78
BRF1-201ENST00000327359 NGDNQ8NEJ9 315 aaKnown RBP19.9■□□□□ 0.78
BRF1-201ENST00000327359 PHACTR3Q96KR7 559 aa19.9■□□□□ 0.78
BRF1-201ENST00000327359 RBM10P98175 930 aaKnown RBP19.9■□□□□ 0.78
BRF1-201ENST00000327359 AATKQ6ZMQ8 1374 aa19.89■□□□□ 0.78
BRF1-201ENST00000327359 PTCH1Q13635 1447 aa19.89■□□□□ 0.77
BRF1-201ENST00000327359 PTMSP20962 102 aa19.89■□□□□ 0.77
BRF1-201ENST00000327359 LRRC7Q96NW7 1537 aa19.89■□□□□ 0.77
BRF1-201ENST00000327359 SSFA2P28290 1259 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms