RNA–Protein interactions for RNA: ENST00000326654.6

ERGIC1-201, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best) BASIC

Gene ERGIC1, Length 3,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-201ENST00000326654 FRAT2O75474 233 aaPredicted RBP10.48□□□□□ -0.73
ERGIC1-201ENST00000326654 PRDM11Q9NQV5 511 aa10.48□□□□□ -0.73
ERGIC1-201ENST00000326654 CCDC9Q9Y3X0 531 aaKnown RBP10.48□□□□□ -0.73
ERGIC1-201ENST00000326654 RAPGEF4Q8WZA2 1011 aa10.47□□□□□ -0.73
ERGIC1-201ENST00000326654 SMG6Q86US8 1419 aaKnown RBP10.47□□□□□ -0.73
ERGIC1-201ENST00000326654 C1orf141Q5JVX7 400 aa10.47□□□□□ -0.73
ERGIC1-201ENST00000326654 UBR1Q8IWV7 1749 aa10.47□□□□□ -0.73
ERGIC1-201ENST00000326654 ELL2O00472 640 aaPredicted RBP10.47□□□□□ -0.73
ERGIC1-201ENST00000326654 RGS3P49796 1198 aa10.47□□□□□ -0.73
ERGIC1-201ENST00000326654 HSP90AA2PQ14568 343 aaPredicted RBP10.47□□□□□ -0.73
ERGIC1-201ENST00000326654 TECPR2O15040 1411 aa10.46□□□□□ -0.73
ERGIC1-201ENST00000326654 PTCH1Q13635 1447 aa10.46□□□□□ -0.73
ERGIC1-201ENST00000326654 NPM3O75607 178 aaKnown RBP10.46□□□□□ -0.73
ERGIC1-201ENST00000326654 TMPOP42166 694 aaKnown RBP10.46□□□□□ -0.73
ERGIC1-201ENST00000326654 MYO3AQ8NEV4 1616 aa10.46□□□□□ -0.74
ERGIC1-201ENST00000326654 SLAIN2Q9P270 581 aa10.46□□□□□ -0.74
ERGIC1-201ENST00000326654 DDX17Q92841 729 aaKnown RBP10.45□□□□□ -0.74
ERGIC1-201ENST00000326654 SMC4Q9NTJ3 1288 aa10.45□□□□□ -0.74
ERGIC1-201ENST00000326654 IFT172Q9UG01 1749 aa10.45□□□□□ -0.74
ERGIC1-201ENST00000326654 PLIN1O60240 522 aa10.45□□□□□ -0.74
ERGIC1-201ENST00000326654 WWC1Q8IX03 1113 aa10.45□□□□□ -0.74
ERGIC1-201ENST00000326654 BCL2L13Q9BXK5 485 aa10.45□□□□□ -0.74
ERGIC1-201ENST00000326654 PODXL2Q9NZ53 605 aa10.45□□□□□ -0.74
ERGIC1-201ENST00000326654 MAP3K19Q56UN5 1328 aa10.45□□□□□ -0.74
ERGIC1-201ENST00000326654 GAS2L2Q8NHY3 880 aa10.45□□□□□ -0.74
ERGIC1-201ENST00000326654 GCP02774 474 aa10.44□□□□□ -0.74
ERGIC1-201ENST00000326654 HSP90AA1P07900 732 aaKnown RBP10.44□□□□□ -0.74
ERGIC1-201ENST00000326654 TEFQ10587 303 aa10.44□□□□□ -0.74
ERGIC1-201ENST00000326654 STRN4Q9NRL3 753 aa10.44□□□□□ -0.74
ERGIC1-201ENST00000326654 USP6P35125 1406 aa10.44□□□□□ -0.74
ERGIC1-201ENST00000326654 MS4A1P11836 297 aa10.44□□□□□ -0.74
ERGIC1-201ENST00000326654 BACH2Q9BYV9 841 aa10.44□□□□□ -0.74
ERGIC1-201ENST00000326654 GNAI1P63096 354 aa10.44□□□□□ -0.74
ERGIC1-201ENST00000326654 ADGRL3Q9HAR2 1447 aa10.44□□□□□ -0.74
ERGIC1-201ENST00000326654 EIF4A2Q14240 407 aaKnown RBP10.43□□□□□ -0.74
ERGIC1-201ENST00000326654 NFE2L2Q16236 605 aa10.43□□□□□ -0.74
ERGIC1-201ENST00000326654 USHBP1Q8N6Y0 703 aa10.43□□□□□ -0.74
ERGIC1-201ENST00000326654 CABLES1Q8TDN4 633 aa10.43□□□□□ -0.74
ERGIC1-201ENST00000326654 LMTK3Q96Q04 1460 aa10.43□□□□□ -0.74
ERGIC1-201ENST00000326654 WDR63Q8IWG1 891 aa10.43□□□□□ -0.74
ERGIC1-201ENST00000326654 SLKQ9H2G2 1235 aaPredicted RBP10.43□□□□□ -0.74
ERGIC1-201ENST00000326654 TOM1O60784 492 aa10.43□□□□□ -0.74
ERGIC1-201ENST00000326654 POLR1AO95602 1720 aaPredicted RBP10.43□□□□□ -0.74
ERGIC1-201ENST00000326654 ANKARQ7Z5J8 1434 aa10.43□□□□□ -0.74
ERGIC1-201ENST00000326654 FLT4P35916 1363 aa10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 IPO8O15397 1037 aaKnown RBP10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 RRP1P56182 461 aaKnown RBP10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 GZF1Q9H116 711 aaPredicted RBP10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 ARHGEF28Q8N1W1 1705 aaKnown RBP10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 A0A0U1RQG5 324 aaPredicted RBP10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 NUTM2BA6NNL0 878 aaPredicted RBP10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 NUTM2EB1AL46 878 aaPredicted RBP10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 PLEKHO1Q53GL0 409 aaPredicted RBP10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 TOM1L2Q6ZVM7 507 aa10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 NUTM2AQ8IVF1 878 aaPredicted RBP10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 FAM43AQ8N2R8 423 aa10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 CHRNA2Q15822 529 aa10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 TSR2Q969E8 191 aaKnown RBP10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 CLUAP1Q96AJ1 413 aa10.42□□□□□ -0.74
ERGIC1-201ENST00000326654 DIP2AQ14689 1571 aa10.41□□□□□ -0.74
ERGIC1-201ENST00000326654 UBAP1LF5GYI3 381 aa10.41□□□□□ -0.74
ERGIC1-201ENST00000326654 SLFN5Q08AF3 891 aa10.41□□□□□ -0.74
ERGIC1-201ENST00000326654 TATP17735 454 aaPredicted RBP10.41□□□□□ -0.74
ERGIC1-201ENST00000326654 AEBP1Q8IUX7 1158 aa10.41□□□□□ -0.74
ERGIC1-201ENST00000326654 THUMPD2Q9BTF0 503 aaKnown RBP10.41□□□□□ -0.74
ERGIC1-201ENST00000326654 TSPYL4Q9UJ04 414 aa10.41□□□□□ -0.74
ERGIC1-201ENST00000326654 STK31Q9BXU1 1019 aa10.4□□□□□ -0.74
ERGIC1-201ENST00000326654 HOXC9P31274 260 aa10.4□□□□□ -0.74
ERGIC1-201ENST00000326654 ZNF530Q6P9A1 599 aaPredicted RBP10.4□□□□□ -0.74
ERGIC1-201ENST00000326654 HOMEZQ8IX15 550 aa10.4□□□□□ -0.74
ERGIC1-201ENST00000326654 ANKRD24Q8TF21 1146 aa10.4□□□□□ -0.74
ERGIC1-201ENST00000326654 ADAMTSL3P82987 1691 aa10.4□□□□□ -0.75
ERGIC1-201ENST00000326654 EXOSC9Q06265 439 aaKnown RBP10.4□□□□□ -0.75
ERGIC1-201ENST00000326654 IL13P35225 146 aa10.39□□□□□ -0.75
ERGIC1-201ENST00000326654 DCTN1Q14203 1278 aa10.39□□□□□ -0.75
ERGIC1-201ENST00000326654 SPRYD3Q8NCJ5 442 aa10.39□□□□□ -0.75
ERGIC1-201ENST00000326654 CPSF1Q10570 1443 aaKnown RBP10.39□□□□□ -0.75
ERGIC1-201ENST00000326654 SBNO1A3KN83 1393 aa10.39□□□□□ -0.75
ERGIC1-201ENST00000326654 IP6K1Q92551 441 aa10.39□□□□□ -0.75
ERGIC1-201ENST00000326654 ARID3AQ99856 593 aa10.39□□□□□ -0.75
ERGIC1-201ENST00000326654 CPS1P31327 1500 aa10.38□□□□□ -0.75
ERGIC1-201ENST00000326654 EYA1Q99502 592 aa10.38□□□□□ -0.75
ERGIC1-201ENST00000326654 MCM10Q7L590 875 aa10.38□□□□□ -0.75
ERGIC1-201ENST00000326654 AATKQ6ZMQ8 1374 aa10.38□□□□□ -0.75
ERGIC1-201ENST00000326654 ADAMTS2O95450 1211 aa10.38□□□□□ -0.75
ERGIC1-201ENST00000326654 CHMP4AQ9BY43 222 aa10.38□□□□□ -0.75
ERGIC1-201ENST00000326654 MEX3CQ5U5Q3 659 aaKnown RBP10.37□□□□□ -0.75
ERGIC1-201ENST00000326654 ITPRIPQ8IWB1 547 aa10.37□□□□□ -0.75
ERGIC1-201ENST00000326654 LRRC59Q96AG4 307 aaKnown RBP10.37□□□□□ -0.75
ERGIC1-201ENST00000326654 PHACTR3Q96KR7 559 aa10.37□□□□□ -0.75
ERGIC1-201ENST00000326654 MED14O60244 1454 aa10.37□□□□□ -0.75
ERGIC1-201ENST00000326654 GNAT3A8MTJ3 354 aa10.37□□□□□ -0.75
ERGIC1-201ENST00000326654 DUSP27Q5VZP5 1158 aa10.37□□□□□ -0.75
ERGIC1-201ENST00000326654 CHMP4BQ9H444 224 aaKnown RBP10.37□□□□□ -0.75
ERGIC1-201ENST00000326654 ZKSCAN2Q63HK3 967 aa10.36□□□□□ -0.75
ERGIC1-201ENST00000326654 SPG7Q9UQ90 795 aa10.36□□□□□ -0.75
ERGIC1-201ENST00000326654 BRINP3Q76B58 766 aa10.36□□□□□ -0.75
ERGIC1-201ENST00000326654 FAM83GA6ND36 823 aa10.35□□□□□ -0.75
ERGIC1-201ENST00000326654 NECTIN2Q92692 538 aa10.35□□□□□ -0.75
ERGIC1-201ENST00000326654 RRAGDQ9NQL2 400 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms