RNA–Protein interactions for RNA: ENST00000325658.3

PPM1A-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 1 (best) BASIC

Gene PPM1A, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-202ENST00000325658 TOMM22Q9NS69 142 aa13.05□□□□□ -0.32
PPM1A-202ENST00000325658 E9PCH4 1651 aa13.05□□□□□ -0.32
PPM1A-202ENST00000325658 KIF21AQ7Z4S6 1674 aa13.04□□□□□ -0.32
PPM1A-202ENST00000325658 ATF7IPQ6VMQ6 1270 aa13.04□□□□□ -0.32
PPM1A-202ENST00000325658 CCAR2Q8N163 923 aaKnown RBP13.04□□□□□ -0.32
PPM1A-202ENST00000325658 CCDC39Q9UFE4 941 aa13.04□□□□□ -0.32
PPM1A-202ENST00000325658 CD109Q6YHK3 1445 aa13.04□□□□□ -0.32
PPM1A-202ENST00000325658 KIF16BQ96L93 1317 aa13.04□□□□□ -0.32
PPM1A-202ENST00000325658 HSP90B1P14625 803 aaKnown RBP13.04□□□□□ -0.32
PPM1A-202ENST00000325658 F6X3S4 739 aa13.03□□□□□ -0.32
PPM1A-202ENST00000325658 SURF6O75683 361 aaKnown RBP13.03□□□□□ -0.32
PPM1A-202ENST00000325658 MVPQ14764 893 aaKnown RBP13.03□□□□□ -0.32
PPM1A-202ENST00000325658 WDR7Q9Y4E6 1490 aa13.03□□□□□ -0.32
PPM1A-202ENST00000325658 AK9Q5TCS8 1911 aa13.03□□□□□ -0.32
PPM1A-202ENST00000325658 CALRP27797 417 aaKnown RBP13.03□□□□□ -0.32
PPM1A-202ENST00000325658 GNL2Q13823 731 aaKnown RBP13.03□□□□□ -0.32
PPM1A-202ENST00000325658 CCDC61Q9Y6R9 512 aa13.03□□□□□ -0.32
PPM1A-202ENST00000325658 KDM4AO75164 1064 aa13.02□□□□□ -0.32
PPM1A-202ENST00000325658 TRIM27P14373 513 aa13.02□□□□□ -0.32
PPM1A-202ENST00000325658 IL1RAPL2Q9NP60 686 aa13.02□□□□□ -0.32
PPM1A-202ENST00000325658 INSRP06213 1382 aa13.02□□□□□ -0.33
PPM1A-202ENST00000325658 NOS1P29475 1434 aa13.02□□□□□ -0.33
PPM1A-202ENST00000325658 ST18O60284 1047 aa13.02□□□□□ -0.33
PPM1A-202ENST00000325658 PLA2R1Q13018 1463 aa13.02□□□□□ -0.33
PPM1A-202ENST00000325658 IFT57Q9NWB7 429 aa13.02□□□□□ -0.33
PPM1A-202ENST00000325658 FOXO3O43524 673 aa13.01□□□□□ -0.33
PPM1A-202ENST00000325658 SMARCA5O60264 1052 aaPredicted RBP13.01□□□□□ -0.33
PPM1A-202ENST00000325658 NOM1Q5C9Z4 860 aaKnown RBP13.01□□□□□ -0.33
PPM1A-202ENST00000325658 PROSER2Q86WR7 435 aaPredicted RBP13.01□□□□□ -0.33
PPM1A-202ENST00000325658 TTC5Q8N0Z6 440 aa13.01□□□□□ -0.33
PPM1A-202ENST00000325658 PDCL2Q8N4E4 241 aa13.01□□□□□ -0.33
PPM1A-202ENST00000325658 PRDM4Q9UKN5 801 aa13.01□□□□□ -0.33
PPM1A-202ENST00000325658 IGSF3O75054 1194 aa13.01□□□□□ -0.33
PPM1A-202ENST00000325658 RTEL1-TNFRSF6BF6WH68 1400 aa13.01□□□□□ -0.33
PPM1A-202ENST00000325658 STRN4Q9NRL3 753 aa13.01□□□□□ -0.33
PPM1A-202ENST00000325658 GTF2E1P29083 439 aaPredicted RBP13□□□□□ -0.33
PPM1A-202ENST00000325658 RAPGEF4Q8WZA2 1011 aa13□□□□□ -0.33
PPM1A-202ENST00000325658 SIL1Q9H173 461 aa13□□□□□ -0.33
PPM1A-202ENST00000325658 EXOC6BQ9Y2D4 811 aa13□□□□□ -0.33
PPM1A-202ENST00000325658 KDM5DQ9BY66 1539 aa13□□□□□ -0.33
PPM1A-202ENST00000325658 ADGRL1O94910 1474 aa13□□□□□ -0.33
PPM1A-202ENST00000325658 TRAPPC8Q9Y2L5 1435 aa13□□□□□ -0.33
PPM1A-202ENST00000325658 RBSNQ9H1K0 784 aa13□□□□□ -0.33
PPM1A-202ENST00000325658 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
PPM1A-202ENST00000325658 ARHGEF12Q9NZN5 1544 aa13□□□□□ -0.33
PPM1A-202ENST00000325658 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
PPM1A-202ENST00000325658 HDGFL1Q5TGJ6 251 aa12.99□□□□□ -0.33
PPM1A-202ENST00000325658 NEUROD6Q96NK8 337 aa12.99□□□□□ -0.33
PPM1A-202ENST00000325658 OFD1O75665 1012 aa12.99□□□□□ -0.33
PPM1A-202ENST00000325658 RAB3GAP1Q15042 981 aa12.99□□□□□ -0.33
PPM1A-202ENST00000325658 RIC3Q7Z5B4 369 aa12.99□□□□□ -0.33
PPM1A-202ENST00000325658 DDX54Q8TDD1 881 aaKnown RBP12.99□□□□□ -0.33
PPM1A-202ENST00000325658 ANXA1P04083 346 aa12.98□□□□□ -0.33
PPM1A-202ENST00000325658 UBTFL1P0CB47 393 aaPredicted RBP12.98□□□□□ -0.33
PPM1A-202ENST00000325658 MYL6BP14649 208 aa12.98□□□□□ -0.33
PPM1A-202ENST00000325658 IRX3P78415 501 aaPredicted RBP12.98□□□□□ -0.33
PPM1A-202ENST00000325658 CCDC85AQ96PX6 553 aaPredicted RBP12.98□□□□□ -0.33
PPM1A-202ENST00000325658 IFIT2P09913 472 aaKnown RBP12.98□□□□□ -0.33
PPM1A-202ENST00000325658 ZNF830Q96NB3 372 aaPredicted RBP12.98□□□□□ -0.33
PPM1A-202ENST00000325658 KIF2CQ99661 725 aa12.98□□□□□ -0.33
PPM1A-202ENST00000325658 KIF3AQ9Y496 699 aa12.98□□□□□ -0.33
PPM1A-202ENST00000325658 PRPF40AO75400 957 aaKnown RBP12.98□□□□□ -0.33
PPM1A-202ENST00000325658 BAG4O95429 457 aaKnown RBP12.97□□□□□ -0.33
PPM1A-202ENST00000325658 RBM25P49756 843 aaKnown RBP12.97□□□□□ -0.33
PPM1A-202ENST00000325658 KRT24Q2M2I5 525 aa12.97□□□□□ -0.33
PPM1A-202ENST00000325658 C17orf53Q8N3J3 647 aaPredicted RBP12.97□□□□□ -0.33
PPM1A-202ENST00000325658 DTNBO60941 627 aa12.97□□□□□ -0.33
PPM1A-202ENST00000325658 ATF3P18847 181 aa12.97□□□□□ -0.33
PPM1A-202ENST00000325658 NEXNQ0ZGT2 675 aa12.97□□□□□ -0.33
PPM1A-202ENST00000325658 AAMPQ13685 434 aa12.97□□□□□ -0.33
PPM1A-202ENST00000325658 TSHZ3Q63HK5 1081 aa12.97□□□□□ -0.33
PPM1A-202ENST00000325658 FBXW7Q969H0 707 aa12.97□□□□□ -0.33
PPM1A-202ENST00000325658 NEK4P51957 841 aa12.96□□□□□ -0.33
PPM1A-202ENST00000325658 WDR63Q8IWG1 891 aa12.96□□□□□ -0.33
PPM1A-202ENST00000325658 NOC3LQ8WTT2 800 aaKnown RBP12.96□□□□□ -0.33
PPM1A-202ENST00000325658 NSFL1CQ9UNZ2 370 aaKnown RBP12.96□□□□□ -0.33
PPM1A-202ENST00000325658 GPATCH3Q96I76 525 aa12.96□□□□□ -0.33
PPM1A-202ENST00000325658 DISP1Q96F81 1524 aa12.96□□□□□ -0.33
PPM1A-202ENST00000325658 HSP90AB2PQ58FF8 381 aa12.96□□□□□ -0.34
PPM1A-202ENST00000325658 ZNF530Q6P9A1 599 aaPredicted RBP12.96□□□□□ -0.34
PPM1A-202ENST00000325658 GPRASP1Q5JY77 1395 aa12.95□□□□□ -0.34
PPM1A-202ENST00000325658 FAM135AQ9P2D6 1515 aa12.95□□□□□ -0.34
PPM1A-202ENST00000325658 DDIT3P35638 169 aa12.95□□□□□ -0.34
PPM1A-202ENST00000325658 GPATCH11Q8N954 259 aa12.95□□□□□ -0.34
PPM1A-202ENST00000325658 C14orf93Q9H972 538 aaKnown RBP12.95□□□□□ -0.34
PPM1A-202ENST00000325658 CWC15Q9P013 229 aaKnown RBP12.95□□□□□ -0.34
PPM1A-202ENST00000325658 VPS37CA5D8V6 355 aaPredicted RBP12.95□□□□□ -0.34
PPM1A-202ENST00000325658 FYB1O15117 783 aa12.95□□□□□ -0.34
PPM1A-202ENST00000325658 ZGPATQ8N5A5 531 aaKnown RBP12.95□□□□□ -0.34
PPM1A-202ENST00000325658 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.95□□□□□ -0.34
PPM1A-202ENST00000325658 TRPM1Q7Z4N2 1603 aa12.95□□□□□ -0.34
PPM1A-202ENST00000325658 SYCE3A1L190 88 aa12.95□□□□□ -0.34
PPM1A-202ENST00000325658 SKIDA1Q1XH10 827 aa12.95□□□□□ -0.34
PPM1A-202ENST00000325658 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
PPM1A-202ENST00000325658 FANCAO15360 1455 aa12.95□□□□□ -0.34
PPM1A-202ENST00000325658 G3BP1Q13283 466 aaKnown RBP eCLIP12.94□□□□□ -0.34
PPM1A-202ENST00000325658 AMOTL2Q9Y2J4 779 aa12.94□□□□□ -0.34
PPM1A-202ENST00000325658 ZSCAN23Q3MJ62 389 aa12.94□□□□□ -0.34
PPM1A-202ENST00000325658 TBC1D9Q6ZT07 1266 aa12.94□□□□□ -0.34
PPM1A-202ENST00000325658 SMC5Q8IY18 1101 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms