RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 DIP2AQ14689 1571 aa25.14■■□□□ 1.61
SOX2-201ENST00000325404 PTPRUQ92729 1446 aa25.14■■□□□ 1.61
SOX2-201ENST00000325404 ITPRIPQ8IWB1 547 aa25.14■■□□□ 1.61
SOX2-201ENST00000325404 NUDT16Q96DE0 195 aaKnown RBP25.13■■□□□ 1.61
SOX2-201ENST00000325404 LRRC7Q96NW7 1537 aa25.12■■□□□ 1.61
SOX2-201ENST00000325404 TBC1D2Q9BYX2 928 aa25.12■■□□□ 1.61
SOX2-201ENST00000325404 CALD1Q05682 793 aaKnown RBP25.11■■□□□ 1.61
SOX2-201ENST00000325404 RSPH6AQ9H0K4 717 aa25.11■■□□□ 1.61
SOX2-201ENST00000325404 CCDC61Q9Y6R9 512 aa25.11■■□□□ 1.61
SOX2-201ENST00000325404 CHMP4BQ9H444 224 aaKnown RBP25.11■■□□□ 1.61
SOX2-201ENST00000325404 AMOTL2Q9Y2J4 779 aa25.11■■□□□ 1.61
SOX2-201ENST00000325404 TMEM57Q8N5G2 664 aa25.1■■□□□ 1.61
SOX2-201ENST00000325404 ARHGAP45Q92619 1136 aa25.09■■□□□ 1.61
SOX2-201ENST00000325404 POLKQ9UBT6 870 aa25.09■■□□□ 1.61
SOX2-201ENST00000325404 CPSF1Q10570 1443 aaKnown RBP25.08■■□□□ 1.61
SOX2-201ENST00000325404 PTCH1Q13635 1447 aa25.08■■□□□ 1.61
SOX2-201ENST00000325404 C22orf23Q9BZE7 217 aa25.07■■□□□ 1.6
SOX2-201ENST00000325404 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.07■■□□□ 1.6
SOX2-201ENST00000325404 PIK3R4Q99570 1358 aa25.06■■□□□ 1.6
SOX2-201ENST00000325404 EDC4Q6P2E9 1401 aaKnown RBP25.06■■□□□ 1.6
SOX2-201ENST00000325404 NUCB1Q02818 461 aa25.06■■□□□ 1.6
SOX2-201ENST00000325404 NFE2L2Q16236 605 aa25.06■■□□□ 1.6
SOX2-201ENST00000325404 ZNF142P52746 1687 aaPredicted RBP25.06■■□□□ 1.6
SOX2-201ENST00000325404 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.05■■□□□ 1.6
SOX2-201ENST00000325404 AATKQ6ZMQ8 1374 aa25.05■■□□□ 1.6
SOX2-201ENST00000325404 PRKAR2BP31323 418 aa25.05■■□□□ 1.6
SOX2-201ENST00000325404 PRR36Q9H6K5 1346 aa25.04■■□□□ 1.6
SOX2-201ENST00000325404 SLKQ9H2G2 1235 aaPredicted RBP25.04■■□□□ 1.6
SOX2-201ENST00000325404 CDK12Q9NYV4 1490 aaPredicted RBP25.03■■□□□ 1.6
SOX2-201ENST00000325404 ANKLE2Q86XL3 938 aa25.03■■□□□ 1.6
SOX2-201ENST00000325404 SETD1BQ9UPS6 1966 aaKnown RBP25.03■■□□□ 1.6
SOX2-201ENST00000325404 NCKAP5LQ9HCH0 1330 aa25.03■■□□□ 1.6
SOX2-201ENST00000325404 IFT57Q9NWB7 429 aa25.02■■□□□ 1.6
SOX2-201ENST00000325404 GNAI1P63096 354 aa25.01■■□□□ 1.59
SOX2-201ENST00000325404 BRPF3Q9ULD4 1205 aa25.01■■□□□ 1.59
SOX2-201ENST00000325404 ZNF692Q9BU19 519 aaPredicted RBP25■■□□□ 1.59
SOX2-201ENST00000325404 ZNF853P0CG23 659 aa25■■□□□ 1.59
SOX2-201ENST00000325404 XRN1Q8IZH2 1706 aaKnown RBP24.99■■□□□ 1.59
SOX2-201ENST00000325404 VAMP4O75379 141 aa24.99■■□□□ 1.59
SOX2-201ENST00000325404 IL13P35225 146 aa24.99■■□□□ 1.59
SOX2-201ENST00000325404 MRPL50Q8N5N7 158 aaKnown RBP24.99■■□□□ 1.59
SOX2-201ENST00000325404 GCC1Q96CN9 775 aa24.99■■□□□ 1.59
SOX2-201ENST00000325404 MAP2P11137 1827 aaKnown RBP24.98■■□□□ 1.59
SOX2-201ENST00000325404 RBM25P49756 843 aaKnown RBP24.98■■□□□ 1.59
SOX2-201ENST00000325404 MON2Q7Z3U7 1717 aa24.98■■□□□ 1.59
SOX2-201ENST00000325404 LMOD3Q0VAK6 560 aa24.97■■□□□ 1.59
SOX2-201ENST00000325404 CHD1LQ86WJ1 897 aa24.97■■□□□ 1.59
SOX2-201ENST00000325404 ZBTB7BO15156 539 aaPredicted RBP24.97■■□□□ 1.59
SOX2-201ENST00000325404 ITSN1Q15811 1721 aa24.97■■□□□ 1.59
SOX2-201ENST00000325404 MFAP1P55081 439 aaKnown RBP24.96■■□□□ 1.59
SOX2-201ENST00000325404 CHMP5Q9NZZ3 219 aa24.96■■□□□ 1.59
SOX2-201ENST00000325404 AKAP12Q02952 1782 aa24.96■■□□□ 1.59
SOX2-201ENST00000325404 BMP2KLQ5H9B9 411 aa24.95■■□□□ 1.59
SOX2-201ENST00000325404 TOPAZ1Q8N9V7 1692 aa24.95■■□□□ 1.59
SOX2-201ENST00000325404 PLEKHG3A1L390 1219 aa24.95■■□□□ 1.58
SOX2-201ENST00000325404 KCNA6P17658 529 aa24.95■■□□□ 1.58
SOX2-201ENST00000325404 NME9Q86XW9 330 aa24.95■■□□□ 1.58
SOX2-201ENST00000325404 PHACTR3Q96KR7 559 aa24.95■■□□□ 1.58
SOX2-201ENST00000325404 NUTM2FA1L443 756 aa24.94■■□□□ 1.58
SOX2-201ENST00000325404 SNX21Q969T3 373 aa24.94■■□□□ 1.58
SOX2-201ENST00000325404 KIF24Q5T7B8 1368 aa24.94■■□□□ 1.58
SOX2-201ENST00000325404 L1TD1Q5T7N2 865 aaKnown RBP24.93■■□□□ 1.58
SOX2-201ENST00000325404 ABCC4O15439 1325 aa24.93■■□□□ 1.58
SOX2-201ENST00000325404 NCOA3Q9Y6Q9 1424 aa24.92■■□□□ 1.58
SOX2-201ENST00000325404 ACEP12821 1306 aa24.92■■□□□ 1.58
SOX2-201ENST00000325404 HSCBQ8IWL3 235 aa24.91■■□□□ 1.58
SOX2-201ENST00000325404 COG3Q96JB2 828 aa24.91■■□□□ 1.58
SOX2-201ENST00000325404 CFAP44Q96MT7 982 aa24.91■■□□□ 1.58
SOX2-201ENST00000325404 MCM4P33991 863 aa24.9■■□□□ 1.58
SOX2-201ENST00000325404 EMILIN1Q9Y6C2 1016 aa24.89■■□□□ 1.58
SOX2-201ENST00000325404 MBIPQ9NS73 344 aa24.89■■□□□ 1.57
SOX2-201ENST00000325404 HMOX1P09601 288 aa24.88■■□□□ 1.57
SOX2-201ENST00000325404 API5Q9BZZ5 524 aaKnown RBP24.88■■□□□ 1.57
SOX2-201ENST00000325404 LNPKQ9C0E8 428 aa24.88■■□□□ 1.57
SOX2-201ENST00000325404 EIF5BO60841 1220 aaKnown RBP24.88■■□□□ 1.57
SOX2-201ENST00000325404 ZRANB1Q9UGI0 708 aa24.87■■□□□ 1.57
SOX2-201ENST00000325404 TTC21BQ7Z4L5 1316 aa24.87■■□□□ 1.57
SOX2-201ENST00000325404 USP6P35125 1406 aa24.87■■□□□ 1.57
SOX2-201ENST00000325404 DDIT3P35638 169 aa24.86■■□□□ 1.57
SOX2-201ENST00000325404 FBLN1P23142 703 aa24.85■■□□□ 1.57
SOX2-201ENST00000325404 TWISTNBQ3B726 338 aaPredicted RBP24.85■■□□□ 1.57
SOX2-201ENST00000325404 TSPYL6Q8N831 410 aa24.85■■□□□ 1.57
SOX2-201ENST00000325404 RTN4Q9NQC3 1192 aaKnown RBP24.85■■□□□ 1.57
SOX2-201ENST00000325404 NRKQ7Z2Y5 1582 aa24.85■■□□□ 1.57
SOX2-201ENST00000325404 NPHP4O75161 1426 aaPredicted RBP24.85■■□□□ 1.57
SOX2-201ENST00000325404 FAM43AQ8N2R8 423 aa24.84■■□□□ 1.57
SOX2-201ENST00000325404 CIZ1Q9ULV3 898 aaPredicted RBP24.84■■□□□ 1.57
SOX2-201ENST00000325404 CHD2O14647 1828 aaKnown RBP24.84■■□□□ 1.57
SOX2-201ENST00000325404 HAP1P54257 671 aaPredicted RBP24.84■■□□□ 1.57
SOX2-201ENST00000325404 ANKARQ7Z5J8 1434 aa24.84■■□□□ 1.57
SOX2-201ENST00000325404 ANKRD45Q5TZF3 282 aa24.83■■□□□ 1.57
SOX2-201ENST00000325404 THUMPD2Q9BTF0 503 aaKnown RBP24.83■■□□□ 1.57
SOX2-201ENST00000325404 DLG5Q8TDM6 1919 aa24.82■■□□□ 1.56
SOX2-201ENST00000325404 SIRT2Q8IXJ6 389 aa24.8■■□□□ 1.56
SOX2-201ENST00000325404 NGDNQ8NEJ9 315 aaKnown RBP24.8■■□□□ 1.56
SOX2-201ENST00000325404 FSD2A1L4K1 749 aa24.8■■□□□ 1.56
SOX2-201ENST00000325404 DDX11L8A8MPP1 907 aa24.8■■□□□ 1.56
SOX2-201ENST00000325404 SSH2Q76I76 1423 aa24.79■■□□□ 1.56
SOX2-201ENST00000325404 C8orf58Q8NAV2 365 aa24.79■■□□□ 1.56
SOX2-201ENST00000325404 OVOS2A0A0J9YW53 1432 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms