RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 IFNL2Q8IZJ0 200 aa20.6■□□□□ 0.89
LMNB2-201ENST00000325327 TTC21AQ8NDW8 1320 aa20.6■□□□□ 0.89
LMNB2-201ENST00000325327 SLC39A6Q13433 755 aa20.6■□□□□ 0.89
LMNB2-201ENST00000325327 ATF7IPQ6VMQ6 1270 aa20.6■□□□□ 0.89
LMNB2-201ENST00000325327 F6X3S4 739 aa20.59■□□□□ 0.89
LMNB2-201ENST00000325327 BTG4Q9NY30 223 aa20.59■□□□□ 0.89
LMNB2-201ENST00000325327 EIF4A2Q14240 407 aaKnown RBP20.59■□□□□ 0.89
LMNB2-201ENST00000325327 CNNM1Q9NRU3 951 aa20.59■□□□□ 0.89
LMNB2-201ENST00000325327 RALGAPBQ86X10 1494 aa20.59■□□□□ 0.89
LMNB2-201ENST00000325327 CLASRPQ8N2M8 674 aaKnown RBP20.58■□□□□ 0.89
LMNB2-201ENST00000325327 SLFN5Q08AF3 891 aa20.57■□□□□ 0.88
LMNB2-201ENST00000325327 CCDC27Q2M243 656 aa20.57■□□□□ 0.88
LMNB2-201ENST00000325327 ARHGEF12Q9NZN5 1544 aa20.57■□□□□ 0.88
LMNB2-201ENST00000325327 MYO5CQ9NQX4 1742 aa20.57■□□□□ 0.88
LMNB2-201ENST00000325327 A0A1W2PP64 1363 aa20.57■□□□□ 0.88
LMNB2-201ENST00000325327 MAP3K19Q56UN5 1328 aa20.57■□□□□ 0.88
LMNB2-201ENST00000325327 SSH1Q8WYL5 1049 aa20.57■□□□□ 0.88
LMNB2-201ENST00000325327 ANO2Q9NQ90 1003 aa20.57■□□□□ 0.88
LMNB2-201ENST00000325327 SAMD9LQ8IVG5 1584 aa20.57■□□□□ 0.88
LMNB2-201ENST00000325327 ZBTB3Q9H5J0 574 aa20.56■□□□□ 0.88
LMNB2-201ENST00000325327 PLEKHH1Q9ULM0 1364 aa20.56■□□□□ 0.88
LMNB2-201ENST00000325327 GNAI2P04899 355 aa20.56■□□□□ 0.88
LMNB2-201ENST00000325327 WASHC4Q2M389 1173 aa20.56■□□□□ 0.88
LMNB2-201ENST00000325327 HSP90AB4PQ58FF6 505 aa20.56■□□□□ 0.88
LMNB2-201ENST00000325327 ZCRB1Q8TBF4 217 aaKnown RBP20.56■□□□□ 0.88
LMNB2-201ENST00000325327 GPTP24298 496 aa20.55■□□□□ 0.88
LMNB2-201ENST00000325327 PIP4K2AP48426 406 aaPredicted RBP20.55■□□□□ 0.88
LMNB2-201ENST00000325327 FOXD4L5Q5VV16 416 aaPredicted RBP20.55■□□□□ 0.88
LMNB2-201ENST00000325327 FOXD4L4Q8WXT5 416 aaPredicted RBP20.55■□□□□ 0.88
LMNB2-201ENST00000325327 NOL10Q9BSC4 688 aaKnown RBP20.55■□□□□ 0.88
LMNB2-201ENST00000325327 DDB1Q16531 1140 aa20.55■□□□□ 0.88
LMNB2-201ENST00000325327 NOP58Q9Y2X3 529 aaKnown RBP20.55■□□□□ 0.88
LMNB2-201ENST00000325327 SAMD1Q6SPF0 538 aaPredicted RBP20.54■□□□□ 0.88
LMNB2-201ENST00000325327 PHF14O94880 888 aa20.53■□□□□ 0.88
LMNB2-201ENST00000325327 DNAJC2Q99543 621 aaKnown RBP20.53■□□□□ 0.88
LMNB2-201ENST00000325327 MPHOSPH8Q99549 860 aa20.53■□□□□ 0.88
LMNB2-201ENST00000325327 MAST1Q9Y2H9 1570 aa20.53■□□□□ 0.88
LMNB2-201ENST00000325327 NINLQ9Y2I6 1382 aa20.53■□□□□ 0.88
LMNB2-201ENST00000325327 SRGAP3O43295 1099 aa20.53■□□□□ 0.88
LMNB2-201ENST00000325327 BCL11BQ9C0K0 894 aaPredicted RBP20.53■□□□□ 0.88
LMNB2-201ENST00000325327 EYA1Q99502 592 aa20.53■□□□□ 0.88
LMNB2-201ENST00000325327 SLC4A3P48751 1232 aa20.52■□□□□ 0.88
LMNB2-201ENST00000325327 MLH3Q9UHC1 1453 aa20.51■□□□□ 0.87
LMNB2-201ENST00000325327 PDE4AP27815 886 aa20.51■□□□□ 0.87
LMNB2-201ENST00000325327 METP08581 1390 aa20.51■□□□□ 0.87
LMNB2-201ENST00000325327 ZPR1O75312 459 aa20.51■□□□□ 0.87
LMNB2-201ENST00000325327 CCDC57Q2TAC2 916 aa20.51■□□□□ 0.87
LMNB2-201ENST00000325327 UGGT1Q9NYU2 1555 aa20.51■□□□□ 0.87
LMNB2-201ENST00000325327 FANCIQ9NVI1 1328 aa20.51■□□□□ 0.87
LMNB2-201ENST00000325327 TMEM57Q8N5G2 664 aa20.51■□□□□ 0.87
LMNB2-201ENST00000325327 FMNL2Q96PY5 1086 aa20.51■□□□□ 0.87
LMNB2-201ENST00000325327 IL1RAPL2Q9NP60 686 aa20.51■□□□□ 0.87
LMNB2-201ENST00000325327 CCT4P50991 539 aaKnown RBP20.5■□□□□ 0.87
LMNB2-201ENST00000325327 ZNF335Q9H4Z2 1342 aaPredicted RBP20.5■□□□□ 0.87
LMNB2-201ENST00000325327 JARID2Q92833 1246 aaPredicted RBP20.5■□□□□ 0.87
LMNB2-201ENST00000325327 TMEM94Q12767 1356 aa20.5■□□□□ 0.87
LMNB2-201ENST00000325327 FOXD4L6Q3SYB3 417 aaPredicted RBP20.5■□□□□ 0.87
LMNB2-201ENST00000325327 FOXD4L3Q6VB84 417 aaPredicted RBP20.5■□□□□ 0.87
LMNB2-201ENST00000325327 MYD88Q99836 296 aa20.5■□□□□ 0.87
LMNB2-201ENST00000325327 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
LMNB2-201ENST00000325327 ABCC1P33527 1531 aa20.49■□□□□ 0.87
LMNB2-201ENST00000325327 ATP5J2-PTCD1G3V325 749 aa20.49■□□□□ 0.87
LMNB2-201ENST00000325327 NSD2O96028 1365 aa20.49■□□□□ 0.87
LMNB2-201ENST00000325327 PHACTR3Q96KR7 559 aa20.49■□□□□ 0.87
LMNB2-201ENST00000325327 IFT57Q9NWB7 429 aa20.49■□□□□ 0.87
LMNB2-201ENST00000325327 ZNF219Q9P2Y4 722 aaPredicted RBP20.49■□□□□ 0.87
LMNB2-201ENST00000325327 PDE3AQ14432 1141 aa20.48■□□□□ 0.87
LMNB2-201ENST00000325327 NFATC2IPQ8NCF5 419 aa20.48■□□□□ 0.87
LMNB2-201ENST00000325327 MTHFSDQ2M296 383 aaKnown RBP20.47■□□□□ 0.87
LMNB2-201ENST00000325327 WWC3Q9ULE0 1092 aa20.47■□□□□ 0.87
LMNB2-201ENST00000325327 LRRFIP1Q32MZ4 808 aaKnown RBP20.47■□□□□ 0.87
LMNB2-201ENST00000325327 TRIM34Q9BYJ4 488 aa20.47■□□□□ 0.87
LMNB2-201ENST00000325327 ERC2O15083 957 aa20.47■□□□□ 0.87
LMNB2-201ENST00000325327 IL2RBP14784 551 aa20.47■□□□□ 0.87
LMNB2-201ENST00000325327 MBIPQ9NS73 344 aa20.47■□□□□ 0.87
LMNB2-201ENST00000325327 EXOC6BQ9Y2D4 811 aa20.47■□□□□ 0.87
LMNB2-201ENST00000325327 RUFY2Q8WXA3 655 aa20.47■□□□□ 0.87
LMNB2-201ENST00000325327 FSD1Q9BTV5 496 aa20.47■□□□□ 0.87
LMNB2-201ENST00000325327 MTMR7Q9Y216 660 aa20.47■□□□□ 0.87
LMNB2-201ENST00000325327 HOXC9P31274 260 aa20.46■□□□□ 0.87
LMNB2-201ENST00000325327 C20orf194Q5TEA3 1177 aa20.46■□□□□ 0.87
LMNB2-201ENST00000325327 RARSP54136 660 aaKnown RBP20.45■□□□□ 0.86
LMNB2-201ENST00000325327 MVPQ14764 893 aaKnown RBP20.45■□□□□ 0.86
LMNB2-201ENST00000325327 KRT24Q2M2I5 525 aa20.44■□□□□ 0.86
LMNB2-201ENST00000325327 PDZRN3Q9UPQ7 1066 aa20.44■□□□□ 0.86
LMNB2-201ENST00000325327 PER1O15534 1290 aaPredicted RBP20.44■□□□□ 0.86
LMNB2-201ENST00000325327 MAP4K4O95819 1239 aaPredicted RBP20.44■□□□□ 0.86
LMNB2-201ENST00000325327 DBF4Q9UBU7 674 aaPredicted RBP20.44■□□□□ 0.86
LMNB2-201ENST00000325327 FLT4P35916 1363 aa20.44■□□□□ 0.86
LMNB2-201ENST00000325327 TRMT112Q9UI30 125 aaKnown RBP20.43■□□□□ 0.86
LMNB2-201ENST00000325327 ZKSCAN1P17029 563 aaPredicted RBP20.43■□□□□ 0.86
LMNB2-201ENST00000325327 MAGI2Q86UL8 1455 aa20.43■□□□□ 0.86
LMNB2-201ENST00000325327 ST18O60284 1047 aa20.42■□□□□ 0.86
LMNB2-201ENST00000325327 FAM98CQ17RN3 349 aaKnown RBP20.42■□□□□ 0.86
LMNB2-201ENST00000325327 ARHGEF5Q12774 1597 aa20.42■□□□□ 0.86
LMNB2-201ENST00000325327 IP6K1Q92551 441 aa20.42■□□□□ 0.86
LMNB2-201ENST00000325327 AK7Q96M32 723 aa20.42■□□□□ 0.86
LMNB2-201ENST00000325327 LARP1Q6PKG0 1096 aaKnown RBP20.42■□□□□ 0.86
LMNB2-201ENST00000325327 STK11IPQ8N1F8 1099 aa20.42■□□□□ 0.86
LMNB2-201ENST00000325327 PI4KAP2A4QPH2 592 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms