RNA–Protein interactions for RNA: ENST00000325103.10

HPS1-201, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-201ENST00000325103 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
HPS1-201ENST00000325103 TSPYL6Q8N831 410 aa16.46■□□□□ 0.23
HPS1-201ENST00000325103 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.23
HPS1-201ENST00000325103 MBIPQ9NS73 344 aa16.46■□□□□ 0.23
HPS1-201ENST00000325103 ATF7IPQ6VMQ6 1270 aa16.45■□□□□ 0.22
HPS1-201ENST00000325103 IGHDP01880 384 aa16.45■□□□□ 0.22
HPS1-201ENST00000325103 CCDC27Q2M243 656 aa16.45■□□□□ 0.22
HPS1-201ENST00000325103 PTPRUQ92729 1446 aa16.45■□□□□ 0.22
HPS1-201ENST00000325103 TMEM57Q8N5G2 664 aa16.44■□□□□ 0.22
HPS1-201ENST00000325103 TRIM27P14373 513 aa16.44■□□□□ 0.22
HPS1-201ENST00000325103 NLRP2Q9NX02 1062 aa16.44■□□□□ 0.22
HPS1-201ENST00000325103 FAM135BQ49AJ0 1406 aa16.44■□□□□ 0.22
HPS1-201ENST00000325103 INSRP06213 1382 aa16.43■□□□□ 0.22
HPS1-201ENST00000325103 TRMT2AQ8IZ69 625 aaKnown RBP16.43■□□□□ 0.22
HPS1-201ENST00000325103 STK31Q9BXU1 1019 aa16.43■□□□□ 0.22
HPS1-201ENST00000325103 EYA1Q99502 592 aa16.43■□□□□ 0.22
HPS1-201ENST00000325103 DDX19BQ9UMR2 479 aa16.43■□□□□ 0.22
HPS1-201ENST00000325103 KIF16BQ96L93 1317 aa16.43■□□□□ 0.22
HPS1-201ENST00000325103 MVPQ14764 893 aaKnown RBP16.42■□□□□ 0.22
HPS1-201ENST00000325103 UPF2Q9HAU5 1272 aaKnown RBP16.42■□□□□ 0.22
HPS1-201ENST00000325103 KRT28Q7Z3Y7 464 aa16.42■□□□□ 0.22
HPS1-201ENST00000325103 C8orf58Q8NAV2 365 aa16.42■□□□□ 0.22
HPS1-201ENST00000325103 ZNF428Q96B54 188 aa16.42■□□□□ 0.22
HPS1-201ENST00000325103 ATP7BP35670 1465 aa16.42■□□□□ 0.22
HPS1-201ENST00000325103 CABLES1Q8TDN4 633 aa16.42■□□□□ 0.22
HPS1-201ENST00000325103 LRRC59Q96AG4 307 aaKnown RBP16.42■□□□□ 0.22
HPS1-201ENST00000325103 TTC21AQ8NDW8 1320 aa16.41■□□□□ 0.22
HPS1-201ENST00000325103 TEFQ10587 303 aa16.41■□□□□ 0.22
HPS1-201ENST00000325103 SLC4A3P48751 1232 aa16.41■□□□□ 0.22
HPS1-201ENST00000325103 MTHFSDQ2M296 383 aaKnown RBP16.4■□□□□ 0.22
HPS1-201ENST00000325103 MYO3AQ8NEV4 1616 aa16.4■□□□□ 0.22
HPS1-201ENST00000325103 CD163L1Q9NR16 1453 aa16.4■□□□□ 0.22
HPS1-201ENST00000325103 PCDHB15Q9Y5E8 787 aa16.4■□□□□ 0.22
HPS1-201ENST00000325103 GAS2L2Q8NHY3 880 aa16.4■□□□□ 0.22
HPS1-201ENST00000325103 NOP58Q9Y2X3 529 aaKnown RBP16.4■□□□□ 0.22
HPS1-201ENST00000325103 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
HPS1-201ENST00000325103 RTL5Q5HYW3 569 aaPredicted RBP16.39■□□□□ 0.21
HPS1-201ENST00000325103 C1orf141Q5JVX7 400 aa16.39■□□□□ 0.21
HPS1-201ENST00000325103 ARXQ96QS3 562 aa16.39■□□□□ 0.21
HPS1-201ENST00000325103 CFAP44Q96MT7 982 aa16.38■□□□□ 0.21
HPS1-201ENST00000325103 LNPKQ9C0E8 428 aa16.38■□□□□ 0.21
HPS1-201ENST00000325103 IFT57Q9NWB7 429 aa16.38■□□□□ 0.21
HPS1-201ENST00000325103 USP6P35125 1406 aa16.38■□□□□ 0.21
HPS1-201ENST00000325103 ANKRD45Q5TZF3 282 aa16.38■□□□□ 0.21
HPS1-201ENST00000325103 USP35Q9P2H5 1018 aa16.38■□□□□ 0.21
HPS1-201ENST00000325103 CPS1P31327 1500 aa16.38■□□□□ 0.21
HPS1-201ENST00000325103 CHRNA2Q15822 529 aa16.37■□□□□ 0.21
HPS1-201ENST00000325103 PDZRN3Q9UPQ7 1066 aa16.37■□□□□ 0.21
HPS1-201ENST00000325103 HOXC9P31274 260 aa16.37■□□□□ 0.21
HPS1-201ENST00000325103 FKBP5Q13451 457 aaPredicted RBP16.36■□□□□ 0.21
HPS1-201ENST00000325103 ZNF530Q6P9A1 599 aaPredicted RBP16.36■□□□□ 0.21
HPS1-201ENST00000325103 FER1L4A9Z1Z3 1794 aa16.36■□□□□ 0.21
HPS1-201ENST00000325103 FAM161AQ3B820 660 aa16.36■□□□□ 0.21
HPS1-201ENST00000325103 CPSF1Q10570 1443 aaKnown RBP16.36■□□□□ 0.21
HPS1-201ENST00000325103 FLT4P35916 1363 aa16.35■□□□□ 0.21
HPS1-201ENST00000325103 RIMS1Q86UR5 1692 aaKnown RBP16.35■□□□□ 0.21
HPS1-201ENST00000325103 MPRIPQ6WCQ1 1025 aa16.35■□□□□ 0.21
HPS1-201ENST00000325103 GNAT3A8MTJ3 354 aa16.34■□□□□ 0.21
HPS1-201ENST00000325103 CT47B1P0C2W7 299 aaPredicted RBP16.34■□□□□ 0.21
HPS1-201ENST00000325103 ANP32EQ9BTT0 268 aa16.34■□□□□ 0.21
HPS1-201ENST00000325103 C3P01024 1663 aa16.34■□□□□ 0.21
HPS1-201ENST00000325103 VAMP4O75379 141 aa16.34■□□□□ 0.21
HPS1-201ENST00000325103 BACH2Q9BYV9 841 aa16.34■□□□□ 0.21
HPS1-201ENST00000325103 API5Q9BZZ5 524 aaKnown RBP16.34■□□□□ 0.21
HPS1-201ENST00000325103 C19orf44Q9H6X5 657 aa16.34■□□□□ 0.21
HPS1-201ENST00000325103 DLC1Q96QB1 1528 aa16.34■□□□□ 0.21
HPS1-201ENST00000325103 GCP02774 474 aa16.34■□□□□ 0.21
HPS1-201ENST00000325103 UBR1Q8IWV7 1749 aa16.34■□□□□ 0.21
HPS1-201ENST00000325103 F6X3S4 739 aa16.33■□□□□ 0.21
HPS1-201ENST00000325103 KCNH5Q8NCM2 988 aa16.33■□□□□ 0.21
HPS1-201ENST00000325103 RAPGEF4Q8WZA2 1011 aa16.33■□□□□ 0.21
HPS1-201ENST00000325103 IPO9Q96P70 1041 aaKnown RBP16.33■□□□□ 0.21
HPS1-201ENST00000325103 IL16Q14005 1332 aa16.33■□□□□ 0.21
HPS1-201ENST00000325103 SETD1BQ9UPS6 1966 aaKnown RBP16.33■□□□□ 0.2
HPS1-201ENST00000325103 MSH5O43196 834 aa16.33■□□□□ 0.2
HPS1-201ENST00000325103 CHMP4BQ9H444 224 aaKnown RBP16.33■□□□□ 0.2
HPS1-201ENST00000325103 NPHP4O75161 1426 aaPredicted RBP16.32■□□□□ 0.2
HPS1-201ENST00000325103 SPRYD3Q8NCJ5 442 aa16.32■□□□□ 0.2
HPS1-201ENST00000325103 MFAP1P55081 439 aaKnown RBP16.32■□□□□ 0.2
HPS1-201ENST00000325103 STRN4Q9NRL3 753 aa16.31■□□□□ 0.2
HPS1-201ENST00000325103 ZNF330Q9Y3S2 320 aaPredicted RBP16.31■□□□□ 0.2
HPS1-201ENST00000325103 TECPR2O15040 1411 aa16.3■□□□□ 0.2
HPS1-201ENST00000325103 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
HPS1-201ENST00000325103 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
HPS1-201ENST00000325103 AATKQ6ZMQ8 1374 aa16.3■□□□□ 0.2
HPS1-201ENST00000325103 NRXN3Q9Y4C0 1643 aa16.3■□□□□ 0.2
HPS1-201ENST00000325103 ALDH1L2Q3SY69 923 aa16.29■□□□□ 0.2
HPS1-201ENST00000325103 PLEKHO1Q53GL0 409 aaPredicted RBP16.29■□□□□ 0.2
HPS1-201ENST00000325103 NBPF6Q5VWK0 638 aa16.29■□□□□ 0.2
HPS1-201ENST00000325103 NBPF4Q96M43 638 aa16.29■□□□□ 0.2
HPS1-201ENST00000325103 EVA1CP58658 441 aa16.29■□□□□ 0.2
HPS1-201ENST00000325103 SBNO1A3KN83 1393 aa16.29■□□□□ 0.2
HPS1-201ENST00000325103 PNPLA6Q8IY17 1366 aa16.29■□□□□ 0.2
HPS1-201ENST00000325103 HDGFL1Q5TGJ6 251 aa16.29■□□□□ 0.2
HPS1-201ENST00000325103 AIMP1Q12904 312 aaKnown RBP16.28■□□□□ 0.2
HPS1-201ENST00000325103 ANXA1P04083 346 aa16.28■□□□□ 0.2
HPS1-201ENST00000325103 MRPL50Q8N5N7 158 aaKnown RBP16.28■□□□□ 0.2
HPS1-201ENST00000325103 CEP170BQ9Y4F5 1589 aaPredicted RBP16.28■□□□□ 0.2
HPS1-201ENST00000325103 DDRGK1Q96HY6 314 aa16.27■□□□□ 0.2
HPS1-201ENST00000325103 PRDM11Q9NQV5 511 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms