RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 SRCIN1Q9C0H9 1055 aa17.23■□□□□ 0.35
NUP98-201ENST00000324932 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
NUP98-201ENST00000324932 EPB41L2O43491 1005 aaKnown RBP17.23■□□□□ 0.35
NUP98-201ENST00000324932 NOL7Q9UMY1 257 aaKnown RBP17.23■□□□□ 0.35
NUP98-201ENST00000324932 MTMR7Q9Y216 660 aa17.23■□□□□ 0.35
NUP98-201ENST00000324932 PPP2R1AP30153 589 aa17.22■□□□□ 0.35
NUP98-201ENST00000324932 IKQ13123 557 aaPredicted RBP17.22■□□□□ 0.35
NUP98-201ENST00000324932 TANGO6Q9C0B7 1094 aa17.22■□□□□ 0.35
NUP98-201ENST00000324932 PSME1Q06323 249 aa17.22■□□□□ 0.35
NUP98-201ENST00000324932 CALCOCO1Q9P1Z2 691 aa17.22■□□□□ 0.35
NUP98-201ENST00000324932 CCDC148Q8NFR7 591 aa17.22■□□□□ 0.35
NUP98-201ENST00000324932 TAF4BQ92750 862 aa17.22■□□□□ 0.35
NUP98-201ENST00000324932 CCT4P50991 539 aaKnown RBP17.22■□□□□ 0.35
NUP98-201ENST00000324932 MAP3K11Q16584 847 aa17.22■□□□□ 0.35
NUP98-201ENST00000324932 SYTL4Q96C24 671 aaPredicted RBP17.22■□□□□ 0.35
NUP98-201ENST00000324932 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.22■□□□□ 0.354e-7■■■□□ 17.5
NUP98-201ENST00000324932 CDKL5O76039 1030 aa17.21■□□□□ 0.35
NUP98-201ENST00000324932 BLOC1S2Q6QNY1 142 aa17.21■□□□□ 0.35
NUP98-201ENST00000324932 MYOM3Q5VTT5 1437 aa17.21■□□□□ 0.35
NUP98-201ENST00000324932 PTPN14Q15678 1187 aa17.21■□□□□ 0.35
NUP98-201ENST00000324932 CCDC158Q5M9N0 1113 aa17.21■□□□□ 0.35
NUP98-201ENST00000324932 ZSCAN12O43309 604 aa17.2■□□□□ 0.34
NUP98-201ENST00000324932 STK3Q13188 491 aa17.2■□□□□ 0.34
NUP98-201ENST00000324932 C1orf115Q9H7X2 142 aa17.2■□□□□ 0.34
NUP98-201ENST00000324932 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
NUP98-201ENST00000324932 PRKCSHP14314 528 aaPredicted RBP17.2■□□□□ 0.34
NUP98-201ENST00000324932 NACAP1Q9BZK3 213 aa17.2■□□□□ 0.34
NUP98-201ENST00000324932 SFPQP23246 707 aaKnown RBP eCLIP17.2■□□□□ 0.34
NUP98-201ENST00000324932 MAP9Q49MG5 647 aa17.19■□□□□ 0.34
NUP98-201ENST00000324932 CHD1LQ86WJ1 897 aa17.19■□□□□ 0.34
NUP98-201ENST00000324932 JPH4Q96JJ6 628 aa17.19■□□□□ 0.34
NUP98-201ENST00000324932 KIF18AQ8NI77 898 aa17.19■□□□□ 0.34
NUP98-201ENST00000324932 FAM107BQ9H098 131 aa17.19■□□□□ 0.34
NUP98-201ENST00000324932 PDRG1Q9NUG6 133 aa17.19■□□□□ 0.34
NUP98-201ENST00000324932 MVPQ14764 893 aaKnown RBP17.19■□□□□ 0.34
NUP98-201ENST00000324932 KRT32Q14532 448 aa17.18■□□□□ 0.34
NUP98-201ENST00000324932 PAF1Q8N7H5 531 aa17.18■□□□□ 0.34
NUP98-201ENST00000324932 MCM3P25205 808 aa17.18■□□□□ 0.34
NUP98-201ENST00000324932 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
NUP98-201ENST00000324932 GBP2P32456 591 aaPredicted RBP17.18■□□□□ 0.34
NUP98-201ENST00000324932 CCDC57Q2TAC2 916 aa17.18■□□□□ 0.34
NUP98-201ENST00000324932 CGNQ9P2M7 1197 aaKnown RBP17.18■□□□□ 0.34
NUP98-201ENST00000324932 TMEM132AQ24JP5 1023 aa17.18■□□□□ 0.34
NUP98-201ENST00000324932 WWC2Q6AWC2 1192 aa17.18■□□□□ 0.34
NUP98-201ENST00000324932 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
NUP98-201ENST00000324932 JAKMIP3Q5VZ66 844 aa17.18■□□□□ 0.34
NUP98-201ENST00000324932 BCAR3O75815 825 aa17.17■□□□□ 0.34
NUP98-201ENST00000324932 ATF7IPQ6VMQ6 1270 aa17.17■□□□□ 0.34
NUP98-201ENST00000324932 KIAA1328Q86T90 577 aa17.17■□□□□ 0.34
NUP98-201ENST00000324932 BMP2KQ9NSY1 1161 aaPredicted RBP17.17■□□□□ 0.34
NUP98-201ENST00000324932 SMG6Q86US8 1419 aaKnown RBP17.17■□□□□ 0.34
NUP98-201ENST00000324932 SCAPERQ9BY12 1400 aa17.17■□□□□ 0.34
NUP98-201ENST00000324932 SYCE3A1L190 88 aa17.17■□□□□ 0.34
NUP98-201ENST00000324932 CFAP100Q494V2 611 aa17.17■□□□□ 0.34
NUP98-201ENST00000324932 TTC39AQ5SRH9 613 aa17.17■□□□□ 0.34
NUP98-201ENST00000324932 WDR63Q8IWG1 891 aa17.17■□□□□ 0.34
NUP98-201ENST00000324932 CCDC69A6NI79 296 aa17.17■□□□□ 0.34
NUP98-201ENST00000324932 EIF5P55010 431 aaKnown RBP17.16■□□□□ 0.34
NUP98-201ENST00000324932 IMMTQ16891 758 aaKnown RBP17.16■□□□□ 0.34
NUP98-201ENST00000324932 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.16■□□□□ 0.34
NUP98-201ENST00000324932 CBX1P83916 185 aa17.16■□□□□ 0.34
NUP98-201ENST00000324932 AKNAQ7Z591 1439 aa17.15■□□□□ 0.34
NUP98-201ENST00000324932 GNL3LQ9NVN8 582 aaKnown RBP17.15■□□□□ 0.34
NUP98-201ENST00000324932 NLRP2Q9NX02 1062 aa17.15■□□□□ 0.34
NUP98-201ENST00000324932 CTNNA3Q9UI47 895 aa17.15■□□□□ 0.34
NUP98-201ENST00000324932 SOGA3Q5TF21 947 aa17.15■□□□□ 0.34
NUP98-201ENST00000324932 ZSCAN25Q6NSZ9 544 aa17.15■□□□□ 0.34
NUP98-201ENST00000324932 MROH2BQ7Z745 1585 aa17.14■□□□□ 0.34
NUP98-201ENST00000324932 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
NUP98-201ENST00000324932 MICALCLQ6ZW33 695 aa17.14■□□□□ 0.33
NUP98-201ENST00000324932 JAKMIP1Q96N16 626 aaKnown RBP17.14■□□□□ 0.33
NUP98-201ENST00000324932 ZHX3Q9H4I2 956 aa17.14■□□□□ 0.33
NUP98-201ENST00000324932 WASF1Q92558 559 aa17.14■□□□□ 0.33
NUP98-201ENST00000324932 MAP2K1Q02750 393 aaPredicted RBP17.14■□□□□ 0.33
NUP98-201ENST00000324932 CCDC91Q7Z6B0 441 aa17.13■□□□□ 0.33
NUP98-201ENST00000324932 ZNF397Q8NF99 534 aaPredicted RBP17.13■□□□□ 0.33
NUP98-201ENST00000324932 KIF5CO60282 957 aa17.13■□□□□ 0.33
NUP98-201ENST00000324932 CABP2Q9NPB3 220 aa17.13■□□□□ 0.33
NUP98-201ENST00000324932 ANO10Q9NW15 660 aa17.13■□□□□ 0.33
NUP98-201ENST00000324932 NEMFO60524 1076 aa17.12■□□□□ 0.33
NUP98-201ENST00000324932 PLEKHO1Q53GL0 409 aaPredicted RBP17.12■□□□□ 0.33
NUP98-201ENST00000324932 CCDC183Q5T5S1 534 aa17.12■□□□□ 0.33
NUP98-201ENST00000324932 RPAP2Q8IXW5 612 aaPredicted RBP17.12■□□□□ 0.33
NUP98-201ENST00000324932 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
NUP98-201ENST00000324932 MCM5P33992 734 aa17.12■□□□□ 0.33
NUP98-201ENST00000324932 TSR2Q969E8 191 aaKnown RBP17.12■□□□□ 0.33
NUP98-201ENST00000324932 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
NUP98-201ENST00000324932 HDGFL1Q5TGJ6 251 aa17.12■□□□□ 0.33
NUP98-201ENST00000324932 DHX37Q8IY37 1157 aaKnown RBP17.12■□□□□ 0.33
NUP98-201ENST00000324932 FGD6Q6ZV73 1430 aa17.12■□□□□ 0.33
NUP98-201ENST00000324932 DDX11Q96FC9 970 aa17.12■□□□□ 0.33
NUP98-201ENST00000324932 SCAND2PQ9GZW5 306 aaPredicted RBP17.11■□□□□ 0.33
NUP98-201ENST00000324932 URI1O94763 535 aaPredicted RBP17.11■□□□□ 0.33
NUP98-201ENST00000324932 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
NUP98-201ENST00000324932 SPA17Q15506 151 aa17.11■□□□□ 0.33
NUP98-201ENST00000324932 NLRP6P59044 892 aa17.11■□□□□ 0.33
NUP98-201ENST00000324932 SEPT11Q9NVA2 429 aaKnown RBP17.11■□□□□ 0.33
NUP98-201ENST00000324932 PNISRQ8TF01 805 aaKnown RBP17.11■□□□□ 0.33
NUP98-201ENST00000324932 POTEB2H3BUK9 544 aa17.1■□□□□ 0.33
NUP98-201ENST00000324932 CETN2P41208 172 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms