RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 PRR36Q9H6K5 1346 aa28.4■■■□□ 2.14
PNKP-201ENST00000322344 ZRANB1Q9UGI0 708 aa28.4■■■□□ 2.14
PNKP-201ENST00000322344 TMEM57Q8N5G2 664 aa28.39■■■□□ 2.14
PNKP-201ENST00000322344 NCKAP5LQ9HCH0 1330 aa28.38■■■□□ 2.13
PNKP-201ENST00000322344 ZBTB40Q9NUA8 1239 aa28.37■■■□□ 2.13
PNKP-201ENST00000322344 ZNF853P0CG23 659 aa28.36■■■□□ 2.13
PNKP-201ENST00000322344 UPF2Q9HAU5 1272 aaKnown RBP28.36■■■□□ 2.13
PNKP-201ENST00000322344 NRKQ7Z2Y5 1582 aa28.36■■■□□ 2.13
PNKP-201ENST00000322344 SLC4A3P48751 1232 aa28.36■■■□□ 2.13
PNKP-201ENST00000322344 CHMP4BQ9H444 224 aaKnown RBP28.36■■■□□ 2.13
PNKP-201ENST00000322344 TOPAZ1Q8N9V7 1692 aa28.35■■■□□ 2.13
PNKP-201ENST00000322344 ARHGAP45Q92619 1136 aa28.35■■■□□ 2.13
PNKP-201ENST00000322344 PLEKHG3A1L390 1219 aa28.35■■■□□ 2.13
PNKP-201ENST00000322344 VAMP4O75379 141 aa28.33■■■□□ 2.13
PNKP-201ENST00000322344 SEC24BO95487 1268 aa28.33■■■□□ 2.13
PNKP-201ENST00000322344 RRS1Q15050 365 aaKnown RBP28.33■■■□□ 2.13
PNKP-201ENST00000322344 SMC5Q8IY18 1101 aa28.33■■■□□ 2.13
PNKP-201ENST00000322344 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.33■■■□□ 2.13
PNKP-201ENST00000322344 TTC21BQ7Z4L5 1316 aa28.33■■■□□ 2.13
PNKP-201ENST00000322344 PTCH1Q13635 1447 aa28.31■■■□□ 2.12
PNKP-201ENST00000322344 PIK3R4Q99570 1358 aa28.3■■■□□ 2.12
PNKP-201ENST00000322344 LTKP29376 864 aa28.3■■■□□ 2.12
PNKP-201ENST00000322344 BECN1Q14457 450 aa28.3■■■□□ 2.12
PNKP-201ENST00000322344 MRPL50Q8N5N7 158 aaKnown RBP28.3■■■□□ 2.12
PNKP-201ENST00000322344 CFAP44Q96MT7 982 aa28.3■■■□□ 2.12
PNKP-201ENST00000322344 OVOS2A0A0J9YW53 1432 aa28.29■■■□□ 2.12
PNKP-201ENST00000322344 OVOS2Q6IE36 1432 aa28.29■■■□□ 2.12
PNKP-201ENST00000322344 THUMPD2Q9BTF0 503 aaKnown RBP28.29■■■□□ 2.12
PNKP-201ENST00000322344 MBIPQ9NS73 344 aa28.29■■■□□ 2.12
PNKP-201ENST00000322344 EID1Q9Y6B2 187 aa28.29■■■□□ 2.12
PNKP-201ENST00000322344 ACEP12821 1306 aa28.29■■■□□ 2.12
PNKP-201ENST00000322344 USP6P35125 1406 aa28.27■■■□□ 2.12
PNKP-201ENST00000322344 SLIT1O75093 1534 aa28.27■■■□□ 2.12
PNKP-201ENST00000322344 TBC1D32Q96NH3 1257 aa28.26■■■□□ 2.12
PNKP-201ENST00000322344 NFKBIBQ15653 356 aa28.26■■■□□ 2.11
PNKP-201ENST00000322344 ARHGAP23Q9P227 1491 aa28.25■■■□□ 2.11
PNKP-201ENST00000322344 DLG5Q8TDM6 1919 aa28.25■■■□□ 2.11
PNKP-201ENST00000322344 TWISTNBQ3B726 338 aaPredicted RBP28.24■■■□□ 2.11
PNKP-201ENST00000322344 PTPRUQ92729 1446 aa28.24■■■□□ 2.11
PNKP-201ENST00000322344 NALCNQ8IZF0 1738 aa28.23■■■□□ 2.11
PNKP-201ENST00000322344 USP31Q70CQ4 1352 aa28.23■■■□□ 2.11
PNKP-201ENST00000322344 EIF4A2Q14240 407 aaKnown RBP28.23■■■□□ 2.11
PNKP-201ENST00000322344 BCL11AQ9H165 835 aa28.23■■■□□ 2.11
PNKP-201ENST00000322344 TSPYL6Q8N831 410 aa28.23■■■□□ 2.11
PNKP-201ENST00000322344 TBX22Q9Y458 520 aa28.22■■■□□ 2.11
PNKP-201ENST00000322344 ABCC4O15439 1325 aa28.21■■■□□ 2.11
PNKP-201ENST00000322344 ZBTB7BO15156 539 aaPredicted RBP28.21■■■□□ 2.11
PNKP-201ENST00000322344 NUCB1Q02818 461 aa28.21■■■□□ 2.11
PNKP-201ENST00000322344 SSH2Q76I76 1423 aa28.21■■■□□ 2.11
PNKP-201ENST00000322344 TTC21AQ8NDW8 1320 aa28.2■■■□□ 2.11
PNKP-201ENST00000322344 HAP1P54257 671 aaPredicted RBP28.2■■■□□ 2.11
PNKP-201ENST00000322344 API5Q9BZZ5 524 aaKnown RBP28.2■■■□□ 2.11
PNKP-201ENST00000322344 DIP2AQ14689 1571 aa28.19■■■□□ 2.1
PNKP-201ENST00000322344 SULT6B1Q6IMI4 303 aa28.18■■■□□ 2.1
PNKP-201ENST00000322344 SLC26A8Q96RN1 970 aa28.18■■■□□ 2.1
PNKP-201ENST00000322344 KIF24Q5T7B8 1368 aa28.17■■■□□ 2.1
PNKP-201ENST00000322344 C8orf58Q8NAV2 365 aa28.17■■■□□ 2.1
PNKP-201ENST00000322344 GCC1Q96CN9 775 aa28.17■■■□□ 2.1
PNKP-201ENST00000322344 AMOTL2Q9Y2J4 779 aa28.17■■■□□ 2.1
PNKP-201ENST00000322344 CEBPAP49715 358 aaPredicted RBP28.16■■■□□ 2.1
PNKP-201ENST00000322344 FAM83GA6ND36 823 aa28.15■■■□□ 2.1
PNKP-201ENST00000322344 RGPD1P0DJD0 1748 aa28.15■■■□□ 2.1
PNKP-201ENST00000322344 ELL2O00472 640 aaPredicted RBP28.14■■■□□ 2.09
PNKP-201ENST00000322344 CHD1LQ86WJ1 897 aa28.14■■■□□ 2.09
PNKP-201ENST00000322344 AEBP1Q8IUX7 1158 aa28.14■■■□□ 2.09
PNKP-201ENST00000322344 PEAK1Q9H792 1746 aa28.14■■■□□ 2.09
PNKP-201ENST00000322344 THEMISQ8N1K5 641 aaPredicted RBP28.13■■■□□ 2.09
PNKP-201ENST00000322344 ARHGEF10O15013 1369 aa28.12■■■□□ 2.09
PNKP-201ENST00000322344 NUTM2FA1L443 756 aa28.12■■■□□ 2.09
PNKP-201ENST00000322344 DCTN1Q14203 1278 aa28.11■■■□□ 2.09
PNKP-201ENST00000322344 KIAA0232Q92628 1395 aa28.11■■■□□ 2.09
PNKP-201ENST00000322344 CHL1O00533 1208 aa28.1■■■□□ 2.09
PNKP-201ENST00000322344 HSP90AB2PQ58FF8 381 aa28.09■■■□□ 2.09
PNKP-201ENST00000322344 C22orf23Q9BZE7 217 aa28.09■■■□□ 2.09
PNKP-201ENST00000322344 FER1L4A9Z1Z3 1794 aa28.08■■■□□ 2.09
PNKP-201ENST00000322344 RIMS1Q86UR5 1692 aaKnown RBP28.08■■■□□ 2.09
PNKP-201ENST00000322344 SBNO1A3KN83 1393 aa28.08■■■□□ 2.09
PNKP-201ENST00000322344 LNPKQ9C0E8 428 aa28.08■■■□□ 2.08
PNKP-201ENST00000322344 FLT4P35916 1363 aa28.07■■■□□ 2.08
PNKP-201ENST00000322344 ANKARQ7Z5J8 1434 aa28.06■■■□□ 2.08
PNKP-201ENST00000322344 MFAP1P55081 439 aaKnown RBP28.05■■■□□ 2.08
PNKP-201ENST00000322344 NGDNQ8NEJ9 315 aaKnown RBP28.05■■■□□ 2.08
PNKP-201ENST00000322344 TBC1D2Q9BYX2 928 aa28.05■■■□□ 2.08
PNKP-201ENST00000322344 XRN1Q8IZH2 1706 aaKnown RBP28.05■■■□□ 2.08
PNKP-201ENST00000322344 MAP3K19Q56UN5 1328 aa28.05■■■□□ 2.08
PNKP-201ENST00000322344 BMP2KLQ5H9B9 411 aa28.04■■■□□ 2.08
PNKP-201ENST00000322344 FMN2Q9NZ56 1722 aa28.04■■■□□ 2.08
PNKP-201ENST00000322344 GSE1Q14687 1217 aa28.04■■■□□ 2.08
PNKP-201ENST00000322344 ANKRD45Q5TZF3 282 aa28.03■■■□□ 2.08
PNKP-201ENST00000322344 INTS3Q68E01 1043 aaKnown RBP28.03■■■□□ 2.08
PNKP-201ENST00000322344 FRAT2O75474 233 aaPredicted RBP28.02■■■□□ 2.08
PNKP-201ENST00000322344 C1orf115Q9H7X2 142 aa28.02■■■□□ 2.08
PNKP-201ENST00000322344 CRB1P82279 1406 aa28.02■■■□□ 2.08
PNKP-201ENST00000322344 KDRP35968 1356 aa28.01■■■□□ 2.07
PNKP-201ENST00000322344 MCM10Q7L590 875 aa28.01■■■□□ 2.07
PNKP-201ENST00000322344 SIRT2Q8IXJ6 389 aa28.01■■■□□ 2.07
PNKP-201ENST00000322344 PTPRCP08575 1304 aa28■■■□□ 2.07
PNKP-201ENST00000322344 ANTXR1Q9H6X2 564 aa28■■■□□ 2.07
PNKP-201ENST00000322344 PIK3C2AO00443 1686 aa27.98■■■□□ 2.07
PNKP-201ENST00000322344 SOX12O15370 315 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms