RNA–Protein interactions for RNA: ENST00000322088.10

PPP2R1A-201, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP2R1A, Length 5,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-201ENST00000322088 PDCP20941 246 aa16.69■□□□□ 0.26
PPP2R1A-201ENST00000322088 NFE2L2Q16236 605 aa16.69■□□□□ 0.26
PPP2R1A-201ENST00000322088 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
PPP2R1A-201ENST00000322088 LRRCC1Q9C099 1032 aa16.68■□□□□ 0.26
PPP2R1A-201ENST00000322088 GRPEL1Q9HAV7 217 aa16.68■□□□□ 0.26
PPP2R1A-201ENST00000322088 CCDC158Q5M9N0 1113 aa16.68■□□□□ 0.26
PPP2R1A-201ENST00000322088 TOM1L2Q6ZVM7 507 aa16.68■□□□□ 0.26
PPP2R1A-201ENST00000322088 STRN4Q9NRL3 753 aa16.68■□□□□ 0.26
PPP2R1A-201ENST00000322088 URB2Q14146 1524 aaKnown RBP16.68■□□□□ 0.26
PPP2R1A-201ENST00000322088 NCOA1Q15788 1441 aa16.67■□□□□ 0.26
PPP2R1A-201ENST00000322088 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
PPP2R1A-201ENST00000322088 TAF3Q5VWG9 929 aa16.66■□□□□ 0.26
PPP2R1A-201ENST00000322088 DNAJC2Q99543 621 aaKnown RBP16.66■□□□□ 0.26
PPP2R1A-201ENST00000322088 GNL3LQ9NVN8 582 aaKnown RBP16.66■□□□□ 0.26
PPP2R1A-201ENST00000322088 SLC3A2P08195 630 aaKnown RBP16.66■□□□□ 0.26
PPP2R1A-201ENST00000322088 PCMTD1Q96MG8 357 aaPredicted RBP16.66■□□□□ 0.26
PPP2R1A-201ENST00000322088 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.66■□□□□ 0.262e-6■■■□□ 16.2
PPP2R1A-201ENST00000322088 NAT10Q9H0A0 1025 aaKnown RBP16.66■□□□□ 0.26
PPP2R1A-201ENST00000322088 CIZ1Q9ULV3 898 aaPredicted RBP16.66■□□□□ 0.26
PPP2R1A-201ENST00000322088 ABCC11Q96J66 1382 aa16.66■□□□□ 0.26
PPP2R1A-201ENST00000322088 C1orf115Q9H7X2 142 aa16.65■□□□□ 0.26
PPP2R1A-201ENST00000322088 CWC15Q9P013 229 aaKnown RBP16.65■□□□□ 0.26
PPP2R1A-201ENST00000322088 ESPNB1AK53 854 aa16.65■□□□□ 0.26
PPP2R1A-201ENST00000322088 PODXL2Q9NZ53 605 aa16.65■□□□□ 0.26
PPP2R1A-201ENST00000322088 TTC39AQ5SRH9 613 aa16.65■□□□□ 0.26
PPP2R1A-201ENST00000322088 CNNM1Q9NRU3 951 aa16.65■□□□□ 0.26
PPP2R1A-201ENST00000322088 TMPOP42166 694 aaKnown RBP16.64■□□□□ 0.25
PPP2R1A-201ENST00000322088 NEK4P51957 841 aa16.64■□□□□ 0.25
PPP2R1A-201ENST00000322088 SLFN5Q08AF3 891 aa16.64■□□□□ 0.25
PPP2R1A-201ENST00000322088 RRS1Q15050 365 aaKnown RBP16.64■□□□□ 0.25
PPP2R1A-201ENST00000322088 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
PPP2R1A-201ENST00000322088 RPAP2Q8IXW5 612 aaPredicted RBP16.64■□□□□ 0.25
PPP2R1A-201ENST00000322088 ZNF592Q92610 1267 aa16.64■□□□□ 0.25
PPP2R1A-201ENST00000322088 ANKRD1Q15327 319 aa16.63■□□□□ 0.25
PPP2R1A-201ENST00000322088 CCDC43Q96MW1 224 aaKnown RBP16.63■□□□□ 0.25
PPP2R1A-201ENST00000322088 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
PPP2R1A-201ENST00000322088 GNAT3A8MTJ3 354 aa16.63■□□□□ 0.25
PPP2R1A-201ENST00000322088 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
PPP2R1A-201ENST00000322088 TSPY26PQ9H489 355 aa16.62■□□□□ 0.25
PPP2R1A-201ENST00000322088 CWC22Q9HCG8 908 aaKnown RBP16.62■□□□□ 0.25
PPP2R1A-201ENST00000322088 FYB1O15117 783 aa16.62■□□□□ 0.25
PPP2R1A-201ENST00000322088 ACBD3Q9H3P7 528 aa16.62■□□□□ 0.25
PPP2R1A-201ENST00000322088 OLFM4Q6UX06 510 aa16.62■□□□□ 0.25
PPP2R1A-201ENST00000322088 HMGB2P26583 209 aaKnown RBP16.61■□□□□ 0.25
PPP2R1A-201ENST00000322088 CHD1LQ86WJ1 897 aa16.61■□□□□ 0.25
PPP2R1A-201ENST00000322088 ZSCAN25Q6NSZ9 544 aa16.61■□□□□ 0.25
PPP2R1A-201ENST00000322088 DENND4BO75064 1496 aaPredicted RBP16.61■□□□□ 0.25
PPP2R1A-201ENST00000322088 NSD2O96028 1365 aa16.61■□□□□ 0.25
PPP2R1A-201ENST00000322088 RPRD2Q5VT52 1461 aaKnown RBP16.61■□□□□ 0.25
PPP2R1A-201ENST00000322088 SCAF11Q99590 1463 aaKnown RBP16.61■□□□□ 0.25
PPP2R1A-201ENST00000322088 IFT57Q9NWB7 429 aa16.6■□□□□ 0.25
PPP2R1A-201ENST00000322088 FOSBP53539 338 aa16.6■□□□□ 0.25
PPP2R1A-201ENST00000322088 CCAR2Q8N163 923 aaKnown RBP16.6■□□□□ 0.25
PPP2R1A-201ENST00000322088 ZNF396Q96N95 335 aaPredicted RBP16.6■□□□□ 0.25
PPP2R1A-201ENST00000322088 CYP46A1Q9Y6A2 500 aa16.6■□□□□ 0.25
PPP2R1A-201ENST00000322088 FANCAO15360 1455 aa16.6■□□□□ 0.25
PPP2R1A-201ENST00000322088 MCM4P33991 863 aa16.6■□□□□ 0.25
PPP2R1A-201ENST00000322088 DDX54Q8TDD1 881 aaKnown RBP16.59■□□□□ 0.25
PPP2R1A-201ENST00000322088 AEBP1Q8IUX7 1158 aa16.59■□□□□ 0.25
PPP2R1A-201ENST00000322088 ALDH1L2Q3SY69 923 aa16.59■□□□□ 0.25
PPP2R1A-201ENST00000322088 SDF4Q9BRK5 362 aa16.59■□□□□ 0.25
PPP2R1A-201ENST00000322088 NACAP1Q9BZK3 213 aa16.59■□□□□ 0.25
PPP2R1A-201ENST00000322088 CCDC57Q2TAC2 916 aa16.59■□□□□ 0.25
PPP2R1A-201ENST00000322088 HOMER1Q86YM7 354 aa16.58■□□□□ 0.24
PPP2R1A-201ENST00000322088 FAM177BA6PVY3 158 aa16.58■□□□□ 0.24
PPP2R1A-201ENST00000322088 DHX8Q14562 1220 aaKnown RBP16.57■□□□□ 0.24
PPP2R1A-201ENST00000322088 CAVIN1Q6NZI2 390 aaKnown RBP16.57■□□□□ 0.24
PPP2R1A-201ENST00000322088 ZSCAN30Q86W11 494 aa16.57■□□□□ 0.24
PPP2R1A-201ENST00000322088 DHX29Q7Z478 1369 aaKnown RBP16.57■□□□□ 0.24
PPP2R1A-201ENST00000322088 UQCRHLA0A096LP55 91 aa16.57■□□□□ 0.24
PPP2R1A-201ENST00000322088 UQCRHP07919 91 aa16.57■□□□□ 0.24
PPP2R1A-201ENST00000322088 PDCL3Q9H2J4 239 aa16.57■□□□□ 0.24
PPP2R1A-201ENST00000322088 PDE4CQ08493 712 aa16.57■□□□□ 0.24
PPP2R1A-201ENST00000322088 SRGAP3O43295 1099 aa16.56■□□□□ 0.24
PPP2R1A-201ENST00000322088 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
PPP2R1A-201ENST00000322088 KINO60870 393 aaKnown RBP16.56■□□□□ 0.24
PPP2R1A-201ENST00000322088 MYL6BP14649 208 aa16.56■□□□□ 0.24
PPP2R1A-201ENST00000322088 RBM10P98175 930 aaKnown RBP16.56■□□□□ 0.24
PPP2R1A-201ENST00000322088 MNS1Q8NEH6 495 aa16.56■□□□□ 0.24
PPP2R1A-201ENST00000322088 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
PPP2R1A-201ENST00000322088 WAPLQ7Z5K2 1190 aa16.55■□□□□ 0.24
PPP2R1A-201ENST00000322088 WASLO00401 505 aaPredicted RBP16.55■□□□□ 0.24
PPP2R1A-201ENST00000322088 CCP110O43303 1012 aa16.55■□□□□ 0.24
PPP2R1A-201ENST00000322088 JMYQ8N9B5 988 aa16.55■□□□□ 0.24
PPP2R1A-201ENST00000322088 MPHOSPH8Q99549 860 aa16.55■□□□□ 0.24
PPP2R1A-201ENST00000322088 PDIA4P13667 645 aaKnown RBP16.55■□□□□ 0.24
PPP2R1A-201ENST00000322088 ADGRF5Q8IZF2 1346 aa16.54■□□□□ 0.24
PPP2R1A-201ENST00000322088 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
PPP2R1A-201ENST00000322088 K7ELQ4 463 aaPredicted RBP16.54■□□□□ 0.24
PPP2R1A-201ENST00000322088 AACSQ86V21 672 aa16.54■□□□□ 0.24
PPP2R1A-201ENST00000322088 NKTRP30414 1462 aaKnown RBP16.54■□□□□ 0.24
PPP2R1A-201ENST00000322088 SIL1Q9H173 461 aa16.54■□□□□ 0.24
PPP2R1A-201ENST00000322088 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.54■□□□□ 0.24
PPP2R1A-201ENST00000322088 TXLNAP40222 546 aa16.54■□□□□ 0.24
PPP2R1A-201ENST00000322088 CTNNA3Q9UI47 895 aa16.54■□□□□ 0.24
PPP2R1A-201ENST00000322088 WDR33Q9C0J8 1336 aaKnown RBP16.54■□□□□ 0.24
PPP2R1A-201ENST00000322088 CEP126Q9P2H0 1117 aa16.53■□□□□ 0.24
PPP2R1A-201ENST00000322088 RAPGEF6Q8TEU7 1601 aa16.53■□□□□ 0.24
PPP2R1A-201ENST00000322088 KRT32Q14532 448 aa16.53■□□□□ 0.24
PPP2R1A-201ENST00000322088 DUSP27Q5VZP5 1158 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms