RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 GTPBP6O43824 516 aaPredicted RBP4.67□□□□□ -1.66
SCAMP1-201ENST00000320280 DDX27Q96GQ7 796 aaKnown RBP4.67□□□□□ -1.66
SCAMP1-201ENST00000320280 ANKRD26Q9UPS8 1709 aa4.67□□□□□ -1.66
SCAMP1-201ENST00000320280 TULP4Q9NRJ4 1543 aa4.67□□□□□ -1.66
SCAMP1-201ENST00000320280 TBC1D12O60347 775 aa4.67□□□□□ -1.66
SCAMP1-201ENST00000320280 ADGRL3Q9HAR2 1447 aa4.67□□□□□ -1.66
SCAMP1-201ENST00000320280 MON2Q7Z3U7 1717 aa4.67□□□□□ -1.66
SCAMP1-201ENST00000320280 PAXIP1Q6ZW49 1069 aaPredicted RBP4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 CADPS2Q86UW7 1296 aa4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 DDX12PQ92771 950 aa4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 ROCK2O75116 1388 aaKnown RBP4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 MST1RQ04912 1400 aa4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 NHSL1Q5SYE7 1610 aa4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 KCNA6P17658 529 aa4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 PPP4R3BQ5MIZ7 849 aa4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 ADGRD1Q6QNK2 874 aa4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 NCKAP5LQ9HCH0 1330 aa4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 CDCA8Q53HL2 280 aa4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 TXNDC2Q86VQ3 553 aa4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 ABCC6O95255 1503 aa4.66□□□□□ -1.66
SCAMP1-201ENST00000320280 ZNF326Q5BKZ1 582 aaKnown RBP4.65□□□□□ -1.66
SCAMP1-201ENST00000320280 L3MBTL2Q969R5 705 aa4.65□□□□□ -1.66
SCAMP1-201ENST00000320280 MYOM1P52179 1685 aa4.65□□□□□ -1.66
SCAMP1-201ENST00000320280 ATP7BP35670 1465 aa4.65□□□□□ -1.66
SCAMP1-201ENST00000320280 PDE4AP27815 886 aa4.65□□□□□ -1.66
SCAMP1-201ENST00000320280 AHDC1Q5TGY3 1603 aaPredicted RBP4.65□□□□□ -1.67
SCAMP1-201ENST00000320280 NRKQ7Z2Y5 1582 aa4.65□□□□□ -1.67
SCAMP1-201ENST00000320280 DPYSL4O14531 572 aa4.65□□□□□ -1.67
SCAMP1-201ENST00000320280 ARHGAP33O14559 1287 aa4.64□□□□□ -1.67
SCAMP1-201ENST00000320280 CEBPAP49715 358 aaPredicted RBP4.64□□□□□ -1.67
SCAMP1-201ENST00000320280 RYDENQ9NUL5 291 aaKnown RBP4.64□□□□□ -1.67
SCAMP1-201ENST00000320280 MED1Q15648 1581 aaPredicted RBP4.64□□□□□ -1.67
SCAMP1-201ENST00000320280 KIF20BQ96Q89 1820 aa4.64□□□□□ -1.67
SCAMP1-201ENST00000320280 ATAD2Q6PL18 1390 aa4.64□□□□□ -1.67
SCAMP1-201ENST00000320280 COL22A1Q8NFW1 1626 aaPredicted RBP4.64□□□□□ -1.67
SCAMP1-201ENST00000320280 EVI5O60447 810 aa4.64□□□□□ -1.67
SCAMP1-201ENST00000320280 RNF40O75150 1001 aa4.64□□□□□ -1.67
SCAMP1-201ENST00000320280 DCAF11Q8TEB1 546 aa4.64□□□□□ -1.67
SCAMP1-201ENST00000320280 PTPRUQ92729 1446 aa4.64□□□□□ -1.67
SCAMP1-201ENST00000320280 PHRF1Q9P1Y6 1649 aaKnown RBP4.63□□□□□ -1.67
SCAMP1-201ENST00000320280 ADGRF5Q8IZF2 1346 aa4.63□□□□□ -1.67
SCAMP1-201ENST00000320280 PROX2Q3B8N5 592 aa4.63□□□□□ -1.67
SCAMP1-201ENST00000320280 SEPT9Q9UHD8 586 aaPredicted RBP4.63□□□□□ -1.67
SCAMP1-201ENST00000320280 LTKP29376 864 aa4.63□□□□□ -1.67
SCAMP1-201ENST00000320280 USP47Q96K76 1375 aa4.63□□□□□ -1.67
SCAMP1-201ENST00000320280 PTCD2Q8WV60 388 aaKnown RBP4.62□□□□□ -1.67
SCAMP1-201ENST00000320280 SHPRHQ149N8 1683 aa4.62□□□□□ -1.67
SCAMP1-201ENST00000320280 TRPM3Q9HCF6 1732 aaPredicted RBP4.62□□□□□ -1.67
SCAMP1-201ENST00000320280 GRXCR2A6NFK2 248 aa4.62□□□□□ -1.67
SCAMP1-201ENST00000320280 EMILIN3Q9NT22 766 aa4.62□□□□□ -1.67
SCAMP1-201ENST00000320280 KTN1Q86UP2 1357 aaKnown RBP4.62□□□□□ -1.67
SCAMP1-201ENST00000320280 CENPJQ9HC77 1338 aaPredicted RBP4.62□□□□□ -1.67
SCAMP1-201ENST00000320280 ADAM33Q9BZ11 813 aa4.62□□□□□ -1.67
SCAMP1-201ENST00000320280 CRISPLD2Q9H0B8 497 aa4.62□□□□□ -1.67
SCAMP1-201ENST00000320280 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.62□□□□□ -1.67
SCAMP1-201ENST00000320280 METP08581 1390 aa4.62□□□□□ -1.67
SCAMP1-201ENST00000320280 NPC1L1Q9UHC9 1359 aa4.62□□□□□ -1.67
SCAMP1-201ENST00000320280 EIF4G2P78344 907 aaKnown RBP eCLIP4.61□□□□□ -1.67
SCAMP1-201ENST00000320280 SIN3AQ96ST3 1273 aa4.61□□□□□ -1.67
SCAMP1-201ENST00000320280 NSD2O96028 1365 aa4.61□□□□□ -1.67
SCAMP1-201ENST00000320280 FAM208AQ9UK61 1670 aaKnown RBP4.61□□□□□ -1.67
SCAMP1-201ENST00000320280 CRYBG1Q9Y4K1 1723 aa4.61□□□□□ -1.67
SCAMP1-201ENST00000320280 MSH6P52701 1360 aa4.61□□□□□ -1.67
SCAMP1-201ENST00000320280 PLEKHG2Q9H7P9 1386 aa4.61□□□□□ -1.67
SCAMP1-201ENST00000320280 ALS2Q96Q42 1657 aa4.61□□□□□ -1.67
SCAMP1-201ENST00000320280 WASHC2AQ641Q2 1341 aa4.61□□□□□ -1.67
SCAMP1-201ENST00000320280 EVC2Q86UK5 1308 aa4.61□□□□□ -1.67
SCAMP1-201ENST00000320280 MARF1Q9Y4F3 1742 aaKnown RBP4.61□□□□□ -1.67
SCAMP1-201ENST00000320280 SLC34A2O95436 690 aa4.6□□□□□ -1.67
SCAMP1-201ENST00000320280 PTPREP23469 700 aa4.6□□□□□ -1.67
SCAMP1-201ENST00000320280 MRPL50Q8N5N7 158 aaKnown RBP4.6□□□□□ -1.67
SCAMP1-201ENST00000320280 SPRYD3Q8NCJ5 442 aa4.6□□□□□ -1.67
SCAMP1-201ENST00000320280 PLA2G2EQ9NZK7 142 aa4.6□□□□□ -1.67
SCAMP1-201ENST00000320280 POLR3AO14802 1390 aaPredicted RBP4.6□□□□□ -1.67
SCAMP1-201ENST00000320280 SMAPO00193 183 aa4.6□□□□□ -1.67
SCAMP1-201ENST00000320280 CARD11Q9BXL7 1154 aa4.6□□□□□ -1.67
SCAMP1-201ENST00000320280 TMF1P82094 1093 aa4.6□□□□□ -1.67
SCAMP1-201ENST00000320280 NBPF8Q3BBV2 869 aa4.6□□□□□ -1.67
SCAMP1-201ENST00000320280 OXER1Q8TDS5 423 aa4.6□□□□□ -1.67
SCAMP1-201ENST00000320280 ABCA3Q99758 1704 aa4.6□□□□□ -1.67
SCAMP1-201ENST00000320280 ROBO2Q9HCK4 1378 aa4.59□□□□□ -1.67
SCAMP1-201ENST00000320280 NEUROD1Q13562 356 aa4.59□□□□□ -1.67
SCAMP1-201ENST00000320280 MAP3K7O43318 606 aa4.59□□□□□ -1.67
SCAMP1-201ENST00000320280 RGL3Q3MIN7 710 aa4.59□□□□□ -1.67
SCAMP1-201ENST00000320280 WDR70Q9NW82 654 aa4.59□□□□□ -1.67
SCAMP1-201ENST00000320280 AMOTL2Q9Y2J4 779 aa4.59□□□□□ -1.67
SCAMP1-201ENST00000320280 SBNO1A3KN83 1393 aa4.59□□□□□ -1.67
SCAMP1-201ENST00000320280 RGPD8O14715 1765 aaPredicted RBP4.59□□□□□ -1.68
SCAMP1-201ENST00000320280 CFAP70Q5T0N1 1121 aa4.59□□□□□ -1.68
SCAMP1-201ENST00000320280 ZDHHC16Q969W1 377 aa4.59□□□□□ -1.68
SCAMP1-201ENST00000320280 C19orf44Q9H6X5 657 aa4.59□□□□□ -1.68
SCAMP1-201ENST00000320280 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.59□□□□□ -1.68
SCAMP1-201ENST00000320280 ROBO1Q9Y6N7 1651 aa4.58□□□□□ -1.68
SCAMP1-201ENST00000320280 PBX2P40425 430 aa4.58□□□□□ -1.68
SCAMP1-201ENST00000320280 WNT2BQ93097 391 aa4.58□□□□□ -1.68
SCAMP1-201ENST00000320280 ANKRD36BQ8N2N9 1353 aa4.58□□□□□ -1.68
SCAMP1-201ENST00000320280 CPSF1Q10570 1443 aaKnown RBP4.58□□□□□ -1.68
SCAMP1-201ENST00000320280 KIF24Q5T7B8 1368 aa4.58□□□□□ -1.68
SCAMP1-201ENST00000320280 PHLPP1O60346 1717 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms