RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 RIPK4P57078 832 aa26.27■■□□□ 1.8
CPNE7-202ENST00000319518 TMEM57Q8N5G2 664 aa26.26■■□□□ 1.79
CPNE7-202ENST00000319518 DDX19BQ9UMR2 479 aa26.26■■□□□ 1.79
CPNE7-202ENST00000319518 CDC42BPGQ6DT37 1551 aa26.26■■□□□ 1.79
CPNE7-202ENST00000319518 MAP2P11137 1827 aaKnown RBP26.25■■□□□ 1.79
CPNE7-202ENST00000319518 SMC5Q8IY18 1101 aa26.24■■□□□ 1.79
CPNE7-202ENST00000319518 ZBTB40Q9NUA8 1239 aa26.24■■□□□ 1.79
CPNE7-202ENST00000319518 RRS1Q15050 365 aaKnown RBP26.23■■□□□ 1.79
CPNE7-202ENST00000319518 AMOTL2Q9Y2J4 779 aa26.22■■□□□ 1.79
CPNE7-202ENST00000319518 HMOX1P09601 288 aa26.22■■□□□ 1.79
CPNE7-202ENST00000319518 MFAP1P55081 439 aaKnown RBP26.21■■□□□ 1.79
CPNE7-202ENST00000319518 C22orf23Q9BZE7 217 aa26.21■■□□□ 1.79
CPNE7-202ENST00000319518 MON2Q7Z3U7 1717 aa26.2■■□□□ 1.78
CPNE7-202ENST00000319518 COG3Q96JB2 828 aa26.2■■□□□ 1.78
CPNE7-202ENST00000319518 PRKAR2BP31323 418 aa26.19■■□□□ 1.78
CPNE7-202ENST00000319518 SPRYD3Q8NCJ5 442 aa26.19■■□□□ 1.78
CPNE7-202ENST00000319518 LRRC7Q96NW7 1537 aa26.19■■□□□ 1.78
CPNE7-202ENST00000319518 ARHGAP23Q9P227 1491 aa26.19■■□□□ 1.78
CPNE7-202ENST00000319518 SLIT1O75093 1534 aa26.19■■□□□ 1.78
CPNE7-202ENST00000319518 RSPH6AQ9H0K4 717 aa26.18■■□□□ 1.78
CPNE7-202ENST00000319518 ACEP12821 1306 aa26.18■■□□□ 1.78
CPNE7-202ENST00000319518 ITSN1Q15811 1721 aa26.17■■□□□ 1.78
CPNE7-202ENST00000319518 AKAP12Q02952 1782 aa26.17■■□□□ 1.78
CPNE7-202ENST00000319518 THEMISQ8N1K5 641 aaPredicted RBP26.16■■□□□ 1.78
CPNE7-202ENST00000319518 KIF16BQ96L93 1317 aa26.16■■□□□ 1.78
CPNE7-202ENST00000319518 PHACTR3Q96KR7 559 aa26.16■■□□□ 1.78
CPNE7-202ENST00000319518 FCHSD2O94868 740 aa26.15■■□□□ 1.78
CPNE7-202ENST00000319518 IL13P35225 146 aa26.14■■□□□ 1.78
CPNE7-202ENST00000319518 ZNF692Q9BU19 519 aaPredicted RBP26.14■■□□□ 1.78
CPNE7-202ENST00000319518 TBX22Q9Y458 520 aa26.14■■□□□ 1.77
CPNE7-202ENST00000319518 ALDH1L2Q3SY69 923 aa26.13■■□□□ 1.77
CPNE7-202ENST00000319518 NUCB1Q02818 461 aa26.13■■□□□ 1.77
CPNE7-202ENST00000319518 TTC21BQ7Z4L5 1316 aa26.12■■□□□ 1.77
CPNE7-202ENST00000319518 IPO8O15397 1037 aaKnown RBP26.11■■□□□ 1.77
CPNE7-202ENST00000319518 AATKQ6ZMQ8 1374 aa26.1■■□□□ 1.77
CPNE7-202ENST00000319518 SOX12O15370 315 aa26.1■■□□□ 1.77
CPNE7-202ENST00000319518 THUMPD2Q9BTF0 503 aaKnown RBP26.1■■□□□ 1.77
CPNE7-202ENST00000319518 PNNQ9H307 717 aaKnown RBP26.1■■□□□ 1.77
CPNE7-202ENST00000319518 LNPKQ9C0E8 428 aa26.09■■□□□ 1.77
CPNE7-202ENST00000319518 TOPAZ1Q8N9V7 1692 aa26.09■■□□□ 1.77
CPNE7-202ENST00000319518 CDK12Q9NYV4 1490 aaPredicted RBP26.09■■□□□ 1.77
CPNE7-202ENST00000319518 PLEKHG3A1L390 1219 aa26.08■■□□□ 1.77
CPNE7-202ENST00000319518 BRPF1P55201 1214 aaPredicted RBP26.08■■□□□ 1.77
CPNE7-202ENST00000319518 MCM4P33991 863 aa26.08■■□□□ 1.77
CPNE7-202ENST00000319518 TSPYL6Q8N831 410 aa26.06■■□□□ 1.76
CPNE7-202ENST00000319518 USP6P35125 1406 aa26.06■■□□□ 1.76
CPNE7-202ENST00000319518 KCNA6P17658 529 aa26.06■■□□□ 1.76
CPNE7-202ENST00000319518 CHD1LQ86WJ1 897 aa26.06■■□□□ 1.76
CPNE7-202ENST00000319518 NRKQ7Z2Y5 1582 aa26.06■■□□□ 1.76
CPNE7-202ENST00000319518 VAMP4O75379 141 aa26.05■■□□□ 1.76
CPNE7-202ENST00000319518 ZBTB7BO15156 539 aaPredicted RBP26.05■■□□□ 1.76
CPNE7-202ENST00000319518 CHMP5Q9NZZ3 219 aa26.05■■□□□ 1.76
CPNE7-202ENST00000319518 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.05■■□□□ 1.76
CPNE7-202ENST00000319518 RIMS1Q86UR5 1692 aaKnown RBP26.04■■□□□ 1.76
CPNE7-202ENST00000319518 RBM25P49756 843 aaKnown RBP26.04■■□□□ 1.76
CPNE7-202ENST00000319518 NFE2L2Q16236 605 aa26.04■■□□□ 1.76
CPNE7-202ENST00000319518 MRPL50Q8N5N7 158 aaKnown RBP26.03■■□□□ 1.76
CPNE7-202ENST00000319518 RGPD8O14715 1765 aaPredicted RBP26.03■■□□□ 1.76
CPNE7-202ENST00000319518 PTCH1Q13635 1447 aa26.03■■□□□ 1.76
CPNE7-202ENST00000319518 C1orf115Q9H7X2 142 aa26.02■■□□□ 1.76
CPNE7-202ENST00000319518 NCOA3Q9Y6Q9 1424 aa26.02■■□□□ 1.76
CPNE7-202ENST00000319518 CEP170BQ9Y4F5 1589 aaPredicted RBP26.02■■□□□ 1.76
CPNE7-202ENST00000319518 FAM43AQ8N2R8 423 aa26.02■■□□□ 1.76
CPNE7-202ENST00000319518 PIK3R4Q99570 1358 aa26.01■■□□□ 1.76
CPNE7-202ENST00000319518 OVOS2A0A0J9YW53 1432 aa26.01■■□□□ 1.75
CPNE7-202ENST00000319518 DDIT3P35638 169 aa26.01■■□□□ 1.75
CPNE7-202ENST00000319518 DIP2AQ14689 1571 aa26.01■■□□□ 1.75
CPNE7-202ENST00000319518 OVOS2Q6IE36 1432 aa26.01■■□□□ 1.75
CPNE7-202ENST00000319518 AEBP1Q8IUX7 1158 aa26.01■■□□□ 1.75
CPNE7-202ENST00000319518 ZNF428Q96B54 188 aa26.01■■□□□ 1.75
CPNE7-202ENST00000319518 RBM33Q96EV2 1170 aaKnown RBP26.01■■□□□ 1.75
CPNE7-202ENST00000319518 EIF4A2Q14240 407 aaKnown RBP25.99■■□□□ 1.75
CPNE7-202ENST00000319518 SIRT2Q8IXJ6 389 aa25.99■■□□□ 1.75
CPNE7-202ENST00000319518 HSCBQ8IWL3 235 aa25.99■■□□□ 1.75
CPNE7-202ENST00000319518 NGDNQ8NEJ9 315 aaKnown RBP25.99■■□□□ 1.75
CPNE7-202ENST00000319518 ZNF853P0CG23 659 aa25.98■■□□□ 1.75
CPNE7-202ENST00000319518 BMP2KLQ5H9B9 411 aa25.98■■□□□ 1.75
CPNE7-202ENST00000319518 FSD2A1L4K1 749 aa25.98■■□□□ 1.75
CPNE7-202ENST00000319518 HSP90AB2PQ58FF8 381 aa25.98■■□□□ 1.75
CPNE7-202ENST00000319518 MBIPQ9NS73 344 aa25.98■■□□□ 1.75
CPNE7-202ENST00000319518 FAM83GA6ND36 823 aa25.97■■□□□ 1.75
CPNE7-202ENST00000319518 ELL2O00472 640 aaPredicted RBP25.97■■□□□ 1.75
CPNE7-202ENST00000319518 L1TD1Q5T7N2 865 aaKnown RBP25.97■■□□□ 1.75
CPNE7-202ENST00000319518 XRN1Q8IZH2 1706 aaKnown RBP25.97■■□□□ 1.75
CPNE7-202ENST00000319518 ARHGAP45Q92619 1136 aa25.97■■□□□ 1.75
CPNE7-202ENST00000319518 KIF2CQ99661 725 aa25.97■■□□□ 1.75
CPNE7-202ENST00000319518 GZF1Q9H116 711 aaPredicted RBP25.97■■□□□ 1.75
CPNE7-202ENST00000319518 SSH2Q76I76 1423 aa25.97■■□□□ 1.75
CPNE7-202ENST00000319518 ANKRD45Q5TZF3 282 aa25.96■■□□□ 1.75
CPNE7-202ENST00000319518 SNX21Q969T3 373 aa25.96■■□□□ 1.75
CPNE7-202ENST00000319518 IFT57Q9NWB7 429 aa25.96■■□□□ 1.75
CPNE7-202ENST00000319518 ABCC4O15439 1325 aa25.95■■□□□ 1.75
CPNE7-202ENST00000319518 XRCC6P12956 609 aaKnown RBP eCLIP25.95■■□□□ 1.754e-6■■■□□ 18.2
CPNE7-202ENST00000319518 DCTN1Q14203 1278 aa25.95■■□□□ 1.75
CPNE7-202ENST00000319518 SULT6B1Q6IMI4 303 aa25.95■■□□□ 1.75
CPNE7-202ENST00000319518 PEAK1Q9H792 1746 aa25.94■■□□□ 1.74
CPNE7-202ENST00000319518 ARXQ96QS3 562 aa25.94■■□□□ 1.74
CPNE7-202ENST00000319518 TRAK2O60296 914 aa25.94■■□□□ 1.74
CPNE7-202ENST00000319518 GCC1Q96CN9 775 aa25.94■■□□□ 1.74
CPNE7-202ENST00000319518 GNAI1P63096 354 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms