RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ZFYVE16Q7Z3T8 1539 aa17.45■□□□□ 0.38
PABPC1-201ENST00000318607 RTEL1-TNFRSF6BF6WH68 1400 aa17.45■□□□□ 0.38
PABPC1-201ENST00000318607 PDCL3Q9H2J4 239 aa17.44■□□□□ 0.38
PABPC1-201ENST00000318607 CBX1P83916 185 aa17.44■□□□□ 0.38
PABPC1-201ENST00000318607 CABP1Q9NZU7 370 aa17.44■□□□□ 0.38
PABPC1-201ENST00000318607 SCAPERQ9BY12 1400 aa17.44■□□□□ 0.38
PABPC1-201ENST00000318607 KIF16BQ96L93 1317 aa17.44■□□□□ 0.38
PABPC1-201ENST00000318607 RRS1Q15050 365 aaKnown RBP17.44■□□□□ 0.38
PABPC1-201ENST00000318607 ANO2Q9NQ90 1003 aa17.44■□□□□ 0.38
PABPC1-201ENST00000318607 ZRANB1Q9UGI0 708 aa17.44■□□□□ 0.38
PABPC1-201ENST00000318607 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
PABPC1-201ENST00000318607 TRAPPC8Q9Y2L5 1435 aa17.43■□□□□ 0.38
PABPC1-201ENST00000318607 TWISTNBQ3B726 338 aaPredicted RBP17.42■□□□□ 0.38
PABPC1-201ENST00000318607 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
PABPC1-201ENST00000318607 TRPM1Q7Z4N2 1603 aa17.42■□□□□ 0.38
PABPC1-201ENST00000318607 NPM1P06748 294 aaKnown RBP eCLIP17.42■□□□□ 0.38
PABPC1-201ENST00000318607 GSPT1P15170 499 aaKnown RBP17.42■□□□□ 0.38
PABPC1-201ENST00000318607 RBM25P49756 843 aaKnown RBP17.42■□□□□ 0.38
PABPC1-201ENST00000318607 BMP2KLQ5H9B9 411 aa17.42■□□□□ 0.38
PABPC1-201ENST00000318607 C8orf58Q8NAV2 365 aa17.42■□□□□ 0.38
PABPC1-201ENST00000318607 EXOC6BQ9Y2D4 811 aa17.42■□□□□ 0.38
PABPC1-201ENST00000318607 EMILIN1Q9Y6C2 1016 aa17.42■□□□□ 0.38
PABPC1-201ENST00000318607 AK9Q5TCS8 1911 aa17.42■□□□□ 0.38
PABPC1-201ENST00000318607 LAMC1P11047 1609 aa17.42■□□□□ 0.38
PABPC1-201ENST00000318607 SPDYE4A6NLX3 237 aa17.41■□□□□ 0.38
PABPC1-201ENST00000318607 F6X3S4 739 aa17.41■□□□□ 0.38
PABPC1-201ENST00000318607 ST18O60284 1047 aa17.41■□□□□ 0.38
PABPC1-201ENST00000318607 SPC24Q8NBT2 197 aa17.41■□□□□ 0.38
PABPC1-201ENST00000318607 EVC2Q86UK5 1308 aa17.41■□□□□ 0.38
PABPC1-201ENST00000318607 KLHL40Q2TBA0 621 aa17.41■□□□□ 0.38
PABPC1-201ENST00000318607 SIRT2Q8IXJ6 389 aa17.41■□□□□ 0.38
PABPC1-201ENST00000318607 NGEFQ8N5V2 710 aa17.41■□□□□ 0.38
PABPC1-201ENST00000318607 CFAP65Q6ZU64 1925 aaKnown RBP17.41■□□□□ 0.38
PABPC1-201ENST00000318607 TTC12Q9H892 705 aaPredicted RBP17.41■□□□□ 0.38
PABPC1-201ENST00000318607 UGGT1Q9NYU2 1555 aa17.41■□□□□ 0.38
PABPC1-201ENST00000318607 CASC1Q6TDU7 716 aa17.4■□□□□ 0.38
PABPC1-201ENST00000318607 PRAM1Q96QH2 718 aa17.4■□□□□ 0.38
PABPC1-201ENST00000318607 TMEM63CQ9P1W3 806 aa17.4■□□□□ 0.38
PABPC1-201ENST00000318607 POLR3AO14802 1390 aaPredicted RBP17.4■□□□□ 0.38
PABPC1-201ENST00000318607 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
PABPC1-201ENST00000318607 NOS1P29475 1434 aa17.39■□□□□ 0.37
PABPC1-201ENST00000318607 GPT2Q8TD30 523 aa17.39■□□□□ 0.37
PABPC1-201ENST00000318607 USP25Q9UHP3 1055 aa17.39■□□□□ 0.37
PABPC1-201ENST00000318607 ATP10AO60312 1499 aa17.39■□□□□ 0.37
PABPC1-201ENST00000318607 OFD1O75665 1012 aa17.39■□□□□ 0.37
PABPC1-201ENST00000318607 ZBTB7BO15156 539 aaPredicted RBP17.38■□□□□ 0.37
PABPC1-201ENST00000318607 CIZ1Q9ULV3 898 aaPredicted RBP17.38■□□□□ 0.37
PABPC1-201ENST00000318607 SIGLEC1Q9BZZ2 1709 aa17.38■□□□□ 0.37
PABPC1-201ENST00000318607 SDSP20132 328 aa17.38■□□□□ 0.37
PABPC1-201ENST00000318607 SNX21Q969T3 373 aa17.38■□□□□ 0.37
PABPC1-201ENST00000318607 LMBRD1Q9NUN5 540 aa17.37■□□□□ 0.37
PABPC1-201ENST00000318607 FYB1O15117 783 aa17.37■□□□□ 0.37
PABPC1-201ENST00000318607 NUCB2P80303 420 aa17.37■□□□□ 0.37
PABPC1-201ENST00000318607 MCM10Q7L590 875 aa17.37■□□□□ 0.37
PABPC1-201ENST00000318607 MLECQ14165 292 aa17.36■□□□□ 0.37
PABPC1-201ENST00000318607 MBIPQ9NS73 344 aa17.36■□□□□ 0.37
PABPC1-201ENST00000318607 NCKAP5LQ9HCH0 1330 aa17.36■□□□□ 0.37
PABPC1-201ENST00000318607 HECW2Q9P2P5 1572 aa17.36■□□□□ 0.37
PABPC1-201ENST00000318607 FIBPO43427 364 aa17.35■□□□□ 0.37
PABPC1-201ENST00000318607 PLEKHM2Q8IWE5 1019 aa17.35■□□□□ 0.37
PABPC1-201ENST00000318607 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.35■□□□□ 0.37
PABPC1-201ENST00000318607 WAPLQ7Z5K2 1190 aa17.35■□□□□ 0.37
PABPC1-201ENST00000318607 ARHGEF40Q8TER5 1519 aa17.35■□□□□ 0.37
PABPC1-201ENST00000318607 E9PCH4 1651 aa17.35■□□□□ 0.37
PABPC1-201ENST00000318607 AAMPQ13685 434 aa17.35■□□□□ 0.37
PABPC1-201ENST00000318607 RABEP1Q15276 862 aa17.35■□□□□ 0.37
PABPC1-201ENST00000318607 CEP152O94986 1710 aa17.35■□□□□ 0.37
PABPC1-201ENST00000318607 INTS3Q68E01 1043 aaKnown RBP17.34■□□□□ 0.37
PABPC1-201ENST00000318607 KIAA1210Q9ULL0 1709 aa17.34■□□□□ 0.37
PABPC1-201ENST00000318607 GADD45BO75293 160 aaPredicted RBP17.34■□□□□ 0.37
PABPC1-201ENST00000318607 HDGFL2Q7Z4V5 671 aaPredicted RBP17.34■□□□□ 0.37
PABPC1-201ENST00000318607 MEIS3Q99687 375 aa17.34■□□□□ 0.37
PABPC1-201ENST00000318607 IL1RAPL2Q9NP60 686 aa17.34■□□□□ 0.37
PABPC1-201ENST00000318607 TERF2IPQ9NYB0 399 aa17.34■□□□□ 0.37
PABPC1-201ENST00000318607 MLH3Q9UHC1 1453 aa17.34■□□□□ 0.37
PABPC1-201ENST00000318607 PLCH2O75038 1416 aa17.34■□□□□ 0.37
PABPC1-201ENST00000318607 GCC1Q96CN9 775 aa17.34■□□□□ 0.37
PABPC1-201ENST00000318607 ERVK-7P63135 1459 aa17.34■□□□□ 0.37
PABPC1-201ENST00000318607 VAMP4O75379 141 aa17.33■□□□□ 0.37
PABPC1-201ENST00000318607 KIAA2012Q0VF49 1180 aa17.33■□□□□ 0.36
PABPC1-201ENST00000318607 ABCA6Q8N139 1617 aa17.33■□□□□ 0.36
PABPC1-201ENST00000318607 TULP1O00294 542 aaPredicted RBP17.33■□□□□ 0.36
PABPC1-201ENST00000318607 TET3O43151 1660 aa17.32■□□□□ 0.36
PABPC1-201ENST00000318607 ZNF142P52746 1687 aaPredicted RBP17.32■□□□□ 0.36
PABPC1-201ENST00000318607 ZNF518AQ6AHZ1 1483 aa17.31■□□□□ 0.36
PABPC1-201ENST00000318607 SYNMO15061 1565 aa17.31■□□□□ 0.36
PABPC1-201ENST00000318607 HCLS1P14317 486 aaPredicted RBP17.31■□□□□ 0.36
PABPC1-201ENST00000318607 DUOX2Q9NRD8 1548 aa17.31■□□□□ 0.36
PABPC1-201ENST00000318607 FBXW7Q969H0 707 aa17.31■□□□□ 0.36
PABPC1-201ENST00000318607 DRC7Q8IY82 874 aa17.3■□□□□ 0.36
PABPC1-201ENST00000318607 USP26Q9BXU7 913 aa17.3■□□□□ 0.36
PABPC1-201ENST00000318607 PTPRTO14522 1441 aa17.3■□□□□ 0.36
PABPC1-201ENST00000318607 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
PABPC1-201ENST00000318607 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
PABPC1-201ENST00000318607 CPA1P15085 419 aa17.3■□□□□ 0.36
PABPC1-201ENST00000318607 NME9Q86XW9 330 aa17.3■□□□□ 0.36
PABPC1-201ENST00000318607 AEBP1Q8IUX7 1158 aa17.3■□□□□ 0.36
PABPC1-201ENST00000318607 MRPL50Q8N5N7 158 aaKnown RBP17.3■□□□□ 0.36
PABPC1-201ENST00000318607 ZKSCAN5Q9Y2L8 839 aa17.3■□□□□ 0.36
PABPC1-201ENST00000318607 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.3■□□□□ 0.362e-24■■■■■ 27.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms