RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 KIF16BQ96L93 1317 aa16.25■□□□□ 0.19
NBPF3-201ENST00000318220 FCHSD2O94868 740 aa16.25■□□□□ 0.19
NBPF3-201ENST00000318220 IL2RBP14784 551 aa16.25■□□□□ 0.19
NBPF3-201ENST00000318220 BAG6P46379 1132 aa16.25■□□□□ 0.19
NBPF3-201ENST00000318220 CLEC11AQ9Y240 323 aa16.25■□□□□ 0.19
NBPF3-201ENST00000318220 LNPKQ9C0E8 428 aa16.24■□□□□ 0.19
NBPF3-201ENST00000318220 IGHMBP2P38935 993 aaKnown RBP16.24■□□□□ 0.19
NBPF3-201ENST00000318220 FAM161AQ3B820 660 aa16.24■□□□□ 0.19
NBPF3-201ENST00000318220 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
NBPF3-201ENST00000318220 CFAP44Q96MT7 982 aa16.23■□□□□ 0.19
NBPF3-201ENST00000318220 FMNL2Q96PY5 1086 aa16.23■□□□□ 0.19
NBPF3-201ENST00000318220 GNL3LQ9NVN8 582 aaKnown RBP16.23■□□□□ 0.19
NBPF3-201ENST00000318220 TBC1D2BQ9UPU7 963 aa16.23■□□□□ 0.19
NBPF3-201ENST00000318220 GNAI3P08754 354 aa16.22■□□□□ 0.19
NBPF3-201ENST00000318220 TAF7Q15545 349 aaPredicted RBP16.22■□□□□ 0.19
NBPF3-201ENST00000318220 HSP90AB4PQ58FF6 505 aa16.22■□□□□ 0.19
NBPF3-201ENST00000318220 CEP126Q9P2H0 1117 aa16.22■□□□□ 0.19
NBPF3-201ENST00000318220 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.19
NBPF3-201ENST00000318220 NBPF5PQ86XG9 351 aaPredicted RBP16.21■□□□□ 0.19
NBPF3-201ENST00000318220 NBPF4Q96M43 638 aa16.21■□□□□ 0.19
NBPF3-201ENST00000318220 STK32BQ9NY57 414 aa16.21■□□□□ 0.19
NBPF3-201ENST00000318220 TMEM94Q12767 1356 aa16.21■□□□□ 0.19
NBPF3-201ENST00000318220 CFAP65Q6ZU64 1925 aaKnown RBP16.21■□□□□ 0.19
NBPF3-201ENST00000318220 ATP5J2-PTCD1G3V325 749 aa16.21■□□□□ 0.19
NBPF3-201ENST00000318220 RRP12Q5JTH9 1297 aaKnown RBP16.21■□□□□ 0.19
NBPF3-201ENST00000318220 CRBNQ96SW2 442 aa16.21■□□□□ 0.19
NBPF3-201ENST00000318220 NFE2L2Q16236 605 aa16.2■□□□□ 0.18
NBPF3-201ENST00000318220 KDM4AO75164 1064 aa16.2■□□□□ 0.18
NBPF3-201ENST00000318220 DUSP27Q5VZP5 1158 aa16.2■□□□□ 0.18
NBPF3-201ENST00000318220 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
NBPF3-201ENST00000318220 PTPN23Q9H3S7 1636 aa16.2■□□□□ 0.18
NBPF3-201ENST00000318220 NFXL1Q6ZNB6 911 aa16.2■□□□□ 0.18
NBPF3-201ENST00000318220 JARID2Q92833 1246 aaPredicted RBP16.2■□□□□ 0.18
NBPF3-201ENST00000318220 FKBP4Q02790 459 aaKnown RBP eCLIP16.19■□□□□ 0.18
NBPF3-201ENST00000318220 EXOC6Q8TAG9 804 aa16.19■□□□□ 0.18
NBPF3-201ENST00000318220 MYD88Q99836 296 aa16.19■□□□□ 0.18
NBPF3-201ENST00000318220 TMOD2Q9NZR1 351 aa16.19■□□□□ 0.18
NBPF3-201ENST00000318220 TMPOP42166 694 aaKnown RBP16.19■□□□□ 0.18
NBPF3-201ENST00000318220 ANO2Q9NQ90 1003 aa16.19■□□□□ 0.18
NBPF3-201ENST00000318220 TSPOAP1O95153 1857 aa16.19■□□□□ 0.18
NBPF3-201ENST00000318220 FOXD4L5Q5VV16 416 aaPredicted RBP16.19■□□□□ 0.18
NBPF3-201ENST00000318220 FOXD4L4Q8WXT5 416 aaPredicted RBP16.19■□□□□ 0.18
NBPF3-201ENST00000318220 KIAA0556O60303 1618 aa16.19■□□□□ 0.18
NBPF3-201ENST00000318220 UGGT2Q9NYU1 1516 aa16.19■□□□□ 0.18
NBPF3-201ENST00000318220 DISP3Q9P2K9 1392 aa16.19■□□□□ 0.18
NBPF3-201ENST00000318220 DISP1Q96F81 1524 aa16.18■□□□□ 0.18
NBPF3-201ENST00000318220 BIVM-ERCC5R4GMW8 1640 aa16.18■□□□□ 0.18
NBPF3-201ENST00000318220 FAM83GA6ND36 823 aa16.18■□□□□ 0.18
NBPF3-201ENST00000318220 CREBRFQ8IUR6 639 aa16.18■□□□□ 0.18
NBPF3-201ENST00000318220 WWC1Q8IX03 1113 aa16.18■□□□□ 0.18
NBPF3-201ENST00000318220 RXRBP28702 533 aa16.18■□□□□ 0.18
NBPF3-201ENST00000318220 FSD1Q9BTV5 496 aa16.18■□□□□ 0.18
NBPF3-201ENST00000318220 FOXD4L6Q3SYB3 417 aaPredicted RBP16.17■□□□□ 0.18
NBPF3-201ENST00000318220 WDR78Q5VTH9 848 aa16.17■□□□□ 0.18
NBPF3-201ENST00000318220 FOXD4L3Q6VB84 417 aaPredicted RBP16.17■□□□□ 0.18
NBPF3-201ENST00000318220 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
NBPF3-201ENST00000318220 RTCBQ9Y3I0 505 aaKnown RBP16.17■□□□□ 0.18
NBPF3-201ENST00000318220 CPLX1O14810 134 aa16.17■□□□□ 0.18
NBPF3-201ENST00000318220 CCDC158Q5M9N0 1113 aa16.17■□□□□ 0.18
NBPF3-201ENST00000318220 CPLX2Q6PUV4 134 aaKnown RBP16.17■□□□□ 0.18
NBPF3-201ENST00000318220 RAI14Q9P0K7 980 aa16.17■□□□□ 0.18
NBPF3-201ENST00000318220 ECM2O94769 699 aaPredicted RBP16.16■□□□□ 0.18
NBPF3-201ENST00000318220 GNPATO15228 680 aa16.16■□□□□ 0.18
NBPF3-201ENST00000318220 NFATC2IPQ8NCF5 419 aa16.16■□□□□ 0.18
NBPF3-201ENST00000318220 RALYLQ86SE5 291 aaKnown RBP16.16■□□□□ 0.18
NBPF3-201ENST00000318220 AEBP1Q8IUX7 1158 aa16.16■□□□□ 0.18
NBPF3-201ENST00000318220 RUFY2Q8WXA3 655 aa16.16■□□□□ 0.18
NBPF3-201ENST00000318220 SMARCC1Q92922 1105 aaPredicted RBP16.16■□□□□ 0.18
NBPF3-201ENST00000318220 ERICH2A1L162 156 aa16.16■□□□□ 0.18
NBPF3-201ENST00000318220 SRGAP3O43295 1099 aa16.16■□□□□ 0.18
NBPF3-201ENST00000318220 GPR162Q16538 588 aa16.16■□□□□ 0.18
NBPF3-201ENST00000318220 METTL24Q5JXM2 366 aa16.16■□□□□ 0.18
NBPF3-201ENST00000318220 TTC39AQ5SRH9 613 aa16.16■□□□□ 0.18
NBPF3-201ENST00000318220 SLKQ9H2G2 1235 aaPredicted RBP16.16■□□□□ 0.18
NBPF3-201ENST00000318220 SETDB2Q96T68 719 aa16.15■□□□□ 0.18
NBPF3-201ENST00000318220 CCNL1Q9UK58 526 aaPredicted RBP16.15■□□□□ 0.18
NBPF3-201ENST00000318220 LRP2BPQ9P2M1 347 aa16.15■□□□□ 0.18
NBPF3-201ENST00000318220 ZKSCAN1P17029 563 aaPredicted RBP16.15■□□□□ 0.18
NBPF3-201ENST00000318220 ERC2O15083 957 aa16.14■□□□□ 0.17
NBPF3-201ENST00000318220 PRIM1P49642 420 aaKnown RBP16.14■□□□□ 0.17
NBPF3-201ENST00000318220 C16orf71Q8IYS4 520 aaPredicted RBP16.14■□□□□ 0.17
NBPF3-201ENST00000318220 A0A087WZG4 1122 aa16.14■□□□□ 0.17
NBPF3-201ENST00000318220 PTMAP06454 111 aaKnown RBP16.14■□□□□ 0.17
NBPF3-201ENST00000318220 DDX46Q7L014 1031 aaKnown RBP16.14■□□□□ 0.17
NBPF3-201ENST00000318220 IDH1O75874 414 aaKnown RBP16.13■□□□□ 0.17
NBPF3-201ENST00000318220 NOB1Q9ULX3 412 aaKnown RBP16.13■□□□□ 0.17
NBPF3-201ENST00000318220 F6X3S4 739 aa16.13■□□□□ 0.17
NBPF3-201ENST00000318220 SF3A1Q15459 793 aaKnown RBP16.13■□□□□ 0.17
NBPF3-201ENST00000318220 MCTP1Q6DN14 999 aa16.13■□□□□ 0.17
NBPF3-201ENST00000318220 PPIP5K1Q6PFW1 1433 aa16.13■□□□□ 0.17
NBPF3-201ENST00000318220 GNAI2P04899 355 aa16.13■□□□□ 0.17
NBPF3-201ENST00000318220 RBM26Q5T8P6 1007 aaKnown RBP16.13■□□□□ 0.17
NBPF3-201ENST00000318220 FAM184AQ8NB25 1140 aa16.13■□□□□ 0.17
NBPF3-201ENST00000318220 SIRT1Q96EB6 747 aa16.13■□□□□ 0.17
NBPF3-201ENST00000318220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.12■□□□□ 0.17
NBPF3-201ENST00000318220 C11orf95C9JLR9 678 aaPredicted RBP16.12■□□□□ 0.17
NBPF3-201ENST00000318220 IL1RAPL2Q9NP60 686 aa16.12■□□□□ 0.17
NBPF3-201ENST00000318220 PARP3Q9Y6F1 533 aa16.12■□□□□ 0.17
NBPF3-201ENST00000318220 TMEM2Q9UHN6 1383 aa16.12■□□□□ 0.17
NBPF3-201ENST00000318220 LARP1Q6PKG0 1096 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms