RNA–Protein interactions for RNA: ENST00000317668.8

PROM2-202, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 3,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-202ENST00000317668 RBM10P98175 930 aaKnown RBP12.96□□□□□ -0.34
PROM2-202ENST00000317668 CHMP3Q9Y3E7 222 aa12.96□□□□□ -0.34
PROM2-202ENST00000317668 INSRP06213 1382 aa12.95□□□□□ -0.34
PROM2-202ENST00000317668 PRDM15P57071 1507 aaPredicted RBP12.95□□□□□ -0.34
PROM2-202ENST00000317668 CLCN1P35523 988 aa12.95□□□□□ -0.34
PROM2-202ENST00000317668 MPNDQ8N594 471 aa12.95□□□□□ -0.34
PROM2-202ENST00000317668 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
PROM2-202ENST00000317668 PIK3C2GO75747 1445 aa12.95□□□□□ -0.34
PROM2-202ENST00000317668 TEFQ10587 303 aa12.95□□□□□ -0.34
PROM2-202ENST00000317668 ATF7IPQ6VMQ6 1270 aa12.95□□□□□ -0.34
PROM2-202ENST00000317668 TSPYL4Q9UJ04 414 aa12.95□□□□□ -0.34
PROM2-202ENST00000317668 DDX54Q8TDD1 881 aaKnown RBP12.95□□□□□ -0.34
PROM2-202ENST00000317668 FYB1O15117 783 aa12.94□□□□□ -0.34
PROM2-202ENST00000317668 NPHP1O15259 732 aa12.94□□□□□ -0.34
PROM2-202ENST00000317668 KRT24Q2M2I5 525 aa12.94□□□□□ -0.34
PROM2-202ENST00000317668 A0A0U1RQG5 324 aaPredicted RBP12.94□□□□□ -0.34
PROM2-202ENST00000317668 FSD2A1L4K1 749 aa12.94□□□□□ -0.34
PROM2-202ENST00000317668 GBP4Q96PP9 640 aa12.94□□□□□ -0.34
PROM2-202ENST00000317668 PODXL2Q9NZ53 605 aa12.94□□□□□ -0.34
PROM2-202ENST00000317668 DDX49Q9Y6V7 483 aaKnown RBP12.94□□□□□ -0.34
PROM2-202ENST00000317668 SMARCA5O60264 1052 aaPredicted RBP12.94□□□□□ -0.34
PROM2-202ENST00000317668 CALD1Q05682 793 aaKnown RBP12.94□□□□□ -0.34
PROM2-202ENST00000317668 SSFA2P28290 1259 aa12.93□□□□□ -0.34
PROM2-202ENST00000317668 AIMP1Q12904 312 aaKnown RBP12.93□□□□□ -0.34
PROM2-202ENST00000317668 HSP90AB2PQ58FF8 381 aa12.93□□□□□ -0.34
PROM2-202ENST00000317668 RAPGEF4Q8WZA2 1011 aa12.93□□□□□ -0.34
PROM2-202ENST00000317668 ATAD2Q6PL18 1390 aa12.93□□□□□ -0.34
PROM2-202ENST00000317668 MLH3Q9UHC1 1453 aa12.93□□□□□ -0.34
PROM2-202ENST00000317668 C1orf141Q5JVX7 400 aa12.93□□□□□ -0.34
PROM2-202ENST00000317668 MEX3CQ5U5Q3 659 aaKnown RBP12.93□□□□□ -0.34
PROM2-202ENST00000317668 F6X3S4 739 aa12.92□□□□□ -0.34
PROM2-202ENST00000317668 CD2BP2O95400 341 aaKnown RBP12.92□□□□□ -0.34
PROM2-202ENST00000317668 MAP4K4O95819 1239 aaPredicted RBP12.92□□□□□ -0.34
PROM2-202ENST00000317668 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
PROM2-202ENST00000317668 KRT28Q7Z3Y7 464 aa12.92□□□□□ -0.34
PROM2-202ENST00000317668 TSHZ3Q63HK5 1081 aa12.92□□□□□ -0.34
PROM2-202ENST00000317668 TOM1L2Q6ZVM7 507 aa12.92□□□□□ -0.34
PROM2-202ENST00000317668 CHMP4BQ9H444 224 aaKnown RBP12.92□□□□□ -0.34
PROM2-202ENST00000317668 WDR63Q8IWG1 891 aa12.91□□□□□ -0.34
PROM2-202ENST00000317668 ANO2Q9NQ90 1003 aa12.91□□□□□ -0.34
PROM2-202ENST00000317668 SHROOM2Q13796 1616 aa12.9□□□□□ -0.34
PROM2-202ENST00000317668 EIF2AK4Q9P2K8 1649 aaKnown RBP12.9□□□□□ -0.34
PROM2-202ENST00000317668 METP08581 1390 aa12.9□□□□□ -0.34
PROM2-202ENST00000317668 MAST1Q9Y2H9 1570 aa12.9□□□□□ -0.34
PROM2-202ENST00000317668 GNAI1P63096 354 aa12.9□□□□□ -0.34
PROM2-202ENST00000317668 NLRP1Q9C000 1473 aa12.9□□□□□ -0.34
PROM2-202ENST00000317668 MCTP1Q6DN14 999 aa12.9□□□□□ -0.34
PROM2-202ENST00000317668 KIAA1211Q6ZU35 1233 aa12.9□□□□□ -0.34
PROM2-202ENST00000317668 NASPP49321 788 aaPredicted RBP12.89□□□□□ -0.35
PROM2-202ENST00000317668 FAM13BQ9NYF5 915 aa12.89□□□□□ -0.35
PROM2-202ENST00000317668 MSNP26038 577 aaKnown RBP12.89□□□□□ -0.35
PROM2-202ENST00000317668 CHAMP1Q96JM3 812 aa12.89□□□□□ -0.35
PROM2-202ENST00000317668 UNC13BO14795 1591 aa12.89□□□□□ -0.35
PROM2-202ENST00000317668 TBX22Q9Y458 520 aa12.89□□□□□ -0.35
PROM2-202ENST00000317668 TMEM2Q9UHN6 1383 aa12.89□□□□□ -0.35
PROM2-202ENST00000317668 DTNBO60941 627 aa12.88□□□□□ -0.35
PROM2-202ENST00000317668 CAVIN1Q6NZI2 390 aaKnown RBP12.88□□□□□ -0.35
PROM2-202ENST00000317668 TSPYL6Q8N831 410 aa12.88□□□□□ -0.35
PROM2-202ENST00000317668 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
PROM2-202ENST00000317668 EXOC6BQ9Y2D4 811 aa12.88□□□□□ -0.35
PROM2-202ENST00000317668 KIF16BQ96L93 1317 aa12.88□□□□□ -0.35
PROM2-202ENST00000317668 YTHDC2Q9H6S0 1430 aaKnown RBP12.88□□□□□ -0.35
PROM2-202ENST00000317668 UBAP1LF5GYI3 381 aa12.88□□□□□ -0.35
PROM2-202ENST00000317668 LMOD3Q0VAK6 560 aa12.88□□□□□ -0.35
PROM2-202ENST00000317668 AEBP1Q8IUX7 1158 aa12.88□□□□□ -0.35
PROM2-202ENST00000317668 IL1RAPL2Q9NP60 686 aa12.88□□□□□ -0.35
PROM2-202ENST00000317668 NINLQ9Y2I6 1382 aa12.88□□□□□ -0.35
PROM2-202ENST00000317668 CHD1LQ86WJ1 897 aa12.88□□□□□ -0.35
PROM2-202ENST00000317668 PHACTR3Q96KR7 559 aa12.88□□□□□ -0.35
PROM2-202ENST00000317668 IQGAP3Q86VI3 1631 aa12.88□□□□□ -0.35
PROM2-202ENST00000317668 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
PROM2-202ENST00000317668 GAS2L2Q8NHY3 880 aa12.87□□□□□ -0.35
PROM2-202ENST00000317668 HMMRO75330 724 aa12.87□□□□□ -0.35
PROM2-202ENST00000317668 RNF214Q8ND24 703 aa12.87□□□□□ -0.35
PROM2-202ENST00000317668 R3HCC1Q9Y3T6 440 aaKnown RBP12.87□□□□□ -0.35
PROM2-202ENST00000317668 ANXA1P04083 346 aa12.86□□□□□ -0.35
PROM2-202ENST00000317668 FOSBP53539 338 aa12.86□□□□□ -0.35
PROM2-202ENST00000317668 POLR3AO14802 1390 aaPredicted RBP12.86□□□□□ -0.35
PROM2-202ENST00000317668 RRP9O43818 475 aaKnown RBP12.85□□□□□ -0.35
PROM2-202ENST00000317668 CADPS2Q86UW7 1296 aa12.85□□□□□ -0.35
PROM2-202ENST00000317668 API5Q9BZZ5 524 aaKnown RBP12.85□□□□□ -0.35
PROM2-202ENST00000317668 LRRC59Q96AG4 307 aaKnown RBP12.85□□□□□ -0.35
PROM2-202ENST00000317668 HECW2Q9P2P5 1572 aa12.85□□□□□ -0.35
PROM2-202ENST00000317668 C19orf44Q9H6X5 657 aa12.85□□□□□ -0.35
PROM2-202ENST00000317668 TTC21BQ7Z4L5 1316 aa12.85□□□□□ -0.35
PROM2-202ENST00000317668 ZNF530Q6P9A1 599 aaPredicted RBP12.84□□□□□ -0.35
PROM2-202ENST00000317668 TBC1D9Q6ZT07 1266 aa12.84□□□□□ -0.35
PROM2-202ENST00000317668 PPIP5K1Q6PFW1 1433 aa12.84□□□□□ -0.35
PROM2-202ENST00000317668 C16orf71Q8IYS4 520 aaPredicted RBP12.84□□□□□ -0.35
PROM2-202ENST00000317668 K7ELQ4 463 aaPredicted RBP12.84□□□□□ -0.35
PROM2-202ENST00000317668 RBM27Q9P2N5 1060 aaKnown RBP12.84□□□□□ -0.35
PROM2-202ENST00000317668 PLXNC1O60486 1568 aa12.83□□□□□ -0.35
PROM2-202ENST00000317668 MCCP23508 829 aa12.83□□□□□ -0.36
PROM2-202ENST00000317668 ERVK-7P63135 1459 aa12.83□□□□□ -0.36
PROM2-202ENST00000317668 SURF6O75683 361 aaKnown RBP12.83□□□□□ -0.36
PROM2-202ENST00000317668 HDAC1Q13547 482 aaPredicted RBP12.83□□□□□ -0.36
PROM2-202ENST00000317668 PKP1Q13835 747 aa12.83□□□□□ -0.36
PROM2-202ENST00000317668 SMC5Q8IY18 1101 aa12.83□□□□□ -0.36
PROM2-202ENST00000317668 ZBTB40Q9NUA8 1239 aa12.83□□□□□ -0.36
PROM2-202ENST00000317668 C9orf78Q9NZ63 289 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms