RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 UNC13BO14795 1591 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 AKAP6Q13023 2319 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 SMG6Q86US8 1419 aaKnown RBP4.52□□□□□ -1.69
GEN1-201ENST00000317402 SCN9AQ15858 1988 aa4.52□□□□□ -1.69
GEN1-201ENST00000317402 PTPRGP23470 1445 aa4.51□□□□□ -1.69
GEN1-201ENST00000317402 STK11IPQ8N1F8 1099 aa4.51□□□□□ -1.69
GEN1-201ENST00000317402 NGEFQ8N5V2 710 aa4.51□□□□□ -1.69
GEN1-201ENST00000317402 TBC1D2Q9BYX2 928 aa4.51□□□□□ -1.69
GEN1-201ENST00000317402 CEP170Q5SW79 1584 aa4.51□□□□□ -1.69
GEN1-201ENST00000317402 BECN1Q14457 450 aa4.51□□□□□ -1.69
GEN1-201ENST00000317402 CHMP4AQ9BY43 222 aa4.51□□□□□ -1.69
GEN1-201ENST00000317402 FAM170AA1A519 330 aa4.51□□□□□ -1.69
GEN1-201ENST00000317402 SSFA2P28290 1259 aa4.51□□□□□ -1.69
GEN1-201ENST00000317402 MYH16Q9H6N6 1097 aa4.51□□□□□ -1.69
GEN1-201ENST00000317402 TRPM6Q9BX84 2022 aa4.51□□□□□ -1.69
GEN1-201ENST00000317402 MTCL1Q9Y4B5 1905 aaKnown RBP4.51□□□□□ -1.69
GEN1-201ENST00000317402 SCN3AQ9NY46 2000 aa4.51□□□□□ -1.69
GEN1-201ENST00000317402 CHAF1AQ13111 956 aaPredicted RBP4.51□□□□□ -1.69
GEN1-201ENST00000317402 DOCK10Q96BY6 2186 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 MTHFSP49914 203 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 NOB1Q9ULX3 412 aaKnown RBP4.5□□□□□ -1.69
GEN1-201ENST00000317402 NRDCO43847 1150 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 ZGPATQ8N5A5 531 aaKnown RBP4.5□□□□□ -1.69
GEN1-201ENST00000317402 ZC3H13Q5T200 1668 aaKnown RBP4.5□□□□□ -1.69
GEN1-201ENST00000317402 ABCA8O94911 1581 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 ZFC3H1O60293 1989 aaKnown RBP4.5□□□□□ -1.69
GEN1-201ENST00000317402 MAP2P11137 1827 aaKnown RBP4.5□□□□□ -1.69
GEN1-201ENST00000317402 WDR43Q15061 677 aaKnown RBP eCLIP4.5□□□□□ -1.69
GEN1-201ENST00000317402 RALGAPA1Q6GYQ0 2036 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 SHROOM3Q8TF72 1996 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 SCN10AQ9Y5Y9 1956 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 ANKRD30AQ9BXX3 1397 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 KIF15Q9NS87 1388 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 DOPEY2Q9Y3R5 2298 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 KIAA1107Q9UPP5 1409 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 G2E3Q7L622 706 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 A0A0G2JS52 829 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 A0A0G2JLW4 131 aa4.5□□□□□ -1.69
GEN1-201ENST00000317402 IRX3P78415 501 aaPredicted RBP4.5□□□□□ -1.69
GEN1-201ENST00000317402 MYBBP1AQ9BQG0 1328 aaKnown RBP4.5□□□□□ -1.69
GEN1-201ENST00000317402 FAM69CQ0P6D2 419 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 DOCK8Q8NF50 2099 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 CHD1O14646 1710 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 POLEQ07864 2286 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 SLFN5Q08AF3 891 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 NME9Q86XW9 330 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 ZBTB22O15209 634 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 TCP11L2Q8N4U5 519 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 TAF6LQ9Y6J9 622 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 ANKRD50Q9ULJ7 1429 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 IQGAP3Q86VI3 1631 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 ZGRF1Q86YA3 2104 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 SIRT2Q8IXJ6 389 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 GAS2L2Q8NHY3 880 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 TMEM57Q8N5G2 664 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 PRAM1Q96QH2 718 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 ESF1Q9H501 851 aaKnown RBP4.49□□□□□ -1.69
GEN1-201ENST00000317402 FAM13BQ9NYF5 915 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 RNF123Q5XPI4 1314 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 XRCC6P12956 609 aaKnown RBP eCLIP4.49□□□□□ -1.69
GEN1-201ENST00000317402 PLCD3Q8N3E9 789 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 GPATCH8Q9UKJ3 1502 aaKnown RBP4.49□□□□□ -1.69
GEN1-201ENST00000317402 A2MP01023 1474 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 U2AF1L5P0DN76 240 aaPredicted RBP4.49□□□□□ -1.69
GEN1-201ENST00000317402 U2AF1Q01081 240 aaKnown RBP eCLIP4.49□□□□□ -1.69
GEN1-201ENST00000317402 FBXW7Q969H0 707 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 CABP1Q9NZU7 370 aa4.49□□□□□ -1.69
GEN1-201ENST00000317402 NUP205Q92621 2012 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 GOLGA6L6A8MZA4 724 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 GOLGA6L22H0YM25 854 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 DNAJC13O75165 2243 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 CASC1Q6TDU7 716 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 MCM10Q7L590 875 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 CABIN1Q9Y6J0 2220 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 NAA30Q147X3 362 aaPredicted RBP4.48□□□□□ -1.69
GEN1-201ENST00000317402 CHMP3Q9Y3E7 222 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 SPAG9O60271 1321 aaKnown RBP4.48□□□□□ -1.69
GEN1-201ENST00000317402 KIAA2026Q5HYC2 2103 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 UHRF1BP1Q6BDS2 1440 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 ITPRIPQ8IWB1 547 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 RNF214Q8ND24 703 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 WNK2Q9Y3S1 2297 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 WASHC2CQ9Y4E1 1318 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 GSE1Q14687 1217 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 TET3O43151 1660 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 KCNQ3O43525 872 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 FAM173BQ6P4H8 233 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 C8orf58Q8NAV2 365 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 TCEANC2Q96MN5 208 aa4.48□□□□□ -1.69
GEN1-201ENST00000317402 CEP152O94986 1710 aa4.47□□□□□ -1.69
GEN1-201ENST00000317402 ERCC4Q92889 916 aaPredicted RBP4.47□□□□□ -1.69
GEN1-201ENST00000317402 CDCA8Q53HL2 280 aa4.47□□□□□ -1.69
GEN1-201ENST00000317402 ATP10AO60312 1499 aa4.47□□□□□ -1.69
GEN1-201ENST00000317402 ERBINQ96RT1 1412 aa4.47□□□□□ -1.69
GEN1-201ENST00000317402 MORC1Q86VD1 984 aa4.47□□□□□ -1.69
GEN1-201ENST00000317402 OS9Q13438 667 aaPredicted RBP4.47□□□□□ -1.69
GEN1-201ENST00000317402 RAB11FIP4Q86YS3 637 aa4.47□□□□□ -1.69
GEN1-201ENST00000317402 USP16Q9Y5T5 823 aa4.47□□□□□ -1.69
GEN1-201ENST00000317402 EIF3AQ14152 1382 aaKnown RBP4.47□□□□□ -1.69
GEN1-201ENST00000317402 E9PSI1 815 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms