RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 NUDT16Q96DE0 195 aaKnown RBP16.5■□□□□ 0.23
SPAST-201ENST00000315285 ALDH1L2Q3SY69 923 aa16.5■□□□□ 0.23
SPAST-201ENST00000315285 CCDC47Q96A33 483 aaKnown RBP16.49■□□□□ 0.23
SPAST-201ENST00000315285 SLC26A8Q96RN1 970 aa16.49■□□□□ 0.23
SPAST-201ENST00000315285 TRIM5Q9C035 493 aa16.49■□□□□ 0.23
SPAST-201ENST00000315285 GPS2Q13227 327 aa16.49■□□□□ 0.23
SPAST-201ENST00000315285 THEMISQ8N1K5 641 aaPredicted RBP16.49■□□□□ 0.23
SPAST-201ENST00000315285 SRGAP3O43295 1099 aa16.49■□□□□ 0.23
SPAST-201ENST00000315285 KINO60870 393 aaKnown RBP16.48■□□□□ 0.23
SPAST-201ENST00000315285 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
SPAST-201ENST00000315285 MAP4K4O95819 1239 aaPredicted RBP16.48■□□□□ 0.23
SPAST-201ENST00000315285 PCMTD1Q96MG8 357 aaPredicted RBP16.47■□□□□ 0.23
SPAST-201ENST00000315285 IL1RAPL2Q9NP60 686 aa16.47■□□□□ 0.23
SPAST-201ENST00000315285 FAM135AQ9P2D6 1515 aa16.47■□□□□ 0.23
SPAST-201ENST00000315285 WAPLQ7Z5K2 1190 aa16.47■□□□□ 0.23
SPAST-201ENST00000315285 GPATCH8Q9UKJ3 1502 aaKnown RBP16.47■□□□□ 0.23
SPAST-201ENST00000315285 AEBP1Q8IUX7 1158 aa16.47■□□□□ 0.23
SPAST-201ENST00000315285 SIL1Q9H173 461 aa16.47■□□□□ 0.23
SPAST-201ENST00000315285 UGGT2Q9NYU1 1516 aa16.47■□□□□ 0.23
SPAST-201ENST00000315285 ZNF771Q7L3S4 317 aaPredicted RBP16.46■□□□□ 0.23
SPAST-201ENST00000315285 TATP17735 454 aaPredicted RBP16.46■□□□□ 0.23
SPAST-201ENST00000315285 CCDC70Q6NSX1 233 aa16.46■□□□□ 0.23
SPAST-201ENST00000315285 EXOC6BQ9Y2D4 811 aa16.46■□□□□ 0.23
SPAST-201ENST00000315285 DHX16O60231 1041 aaKnown RBP16.46■□□□□ 0.23
SPAST-201ENST00000315285 CEP89Q96ST8 783 aa16.46■□□□□ 0.23
SPAST-201ENST00000315285 ADGRL1O94910 1474 aa16.46■□□□□ 0.22
SPAST-201ENST00000315285 DCTN1Q14203 1278 aa16.45■□□□□ 0.22
SPAST-201ENST00000315285 ANKRD1Q15327 319 aa16.45■□□□□ 0.22
SPAST-201ENST00000315285 TBC1D2BQ9UPU7 963 aa16.45■□□□□ 0.22
SPAST-201ENST00000315285 OLFM4Q6UX06 510 aa16.45■□□□□ 0.22
SPAST-201ENST00000315285 MCM10Q7L590 875 aa16.45■□□□□ 0.22
SPAST-201ENST00000315285 TRIM27P14373 513 aa16.45■□□□□ 0.22
SPAST-201ENST00000315285 PROSER2Q86WR7 435 aaPredicted RBP16.44■□□□□ 0.22
SPAST-201ENST00000315285 MNS1Q8NEH6 495 aa16.44■□□□□ 0.22
SPAST-201ENST00000315285 PDE4CQ08493 712 aa16.44■□□□□ 0.22
SPAST-201ENST00000315285 MIS18AQ9NYP9 233 aa16.44■□□□□ 0.22
SPAST-201ENST00000315285 AACSQ86V21 672 aa16.43■□□□□ 0.22
SPAST-201ENST00000315285 KRT85P78386 507 aa16.43■□□□□ 0.22
SPAST-201ENST00000315285 ZNF396Q96N95 335 aaPredicted RBP16.43■□□□□ 0.22
SPAST-201ENST00000315285 MAP7D2Q96T17 732 aa16.43■□□□□ 0.22
SPAST-201ENST00000315285 RALGAPBQ86X10 1494 aa16.43■□□□□ 0.22
SPAST-201ENST00000315285 RAD21O60216 631 aa16.43■□□□□ 0.22
SPAST-201ENST00000315285 CCDC192P0DO97 292 aa16.43■□□□□ 0.22
SPAST-201ENST00000315285 CEBPZQ03701 1054 aaKnown RBP16.43■□□□□ 0.22
SPAST-201ENST00000315285 MTERF4Q7Z6M4 381 aaKnown RBP16.43■□□□□ 0.22
SPAST-201ENST00000315285 STK3Q13188 491 aa16.43■□□□□ 0.22
SPAST-201ENST00000315285 CWC27Q6UX04 472 aaKnown RBP16.43■□□□□ 0.22
SPAST-201ENST00000315285 NME9Q86XW9 330 aa16.43■□□□□ 0.22
SPAST-201ENST00000315285 ZNF608Q9ULD9 1512 aaPredicted RBP16.43■□□□□ 0.22
SPAST-201ENST00000315285 LARP1BQ659C4 914 aaKnown RBP16.42■□□□□ 0.22
SPAST-201ENST00000315285 TBC1D2Q9BYX2 928 aa16.42■□□□□ 0.22
SPAST-201ENST00000315285 GNAT3A8MTJ3 354 aa16.42■□□□□ 0.22
SPAST-201ENST00000315285 SART3Q15020 963 aaKnown RBP16.42■□□□□ 0.22
SPAST-201ENST00000315285 EMILIN1Q9Y6C2 1016 aa16.42■□□□□ 0.22
SPAST-201ENST00000315285 XBP1P17861 261 aa16.42■□□□□ 0.22
SPAST-201ENST00000315285 BLOC1S2Q6QNY1 142 aa16.42■□□□□ 0.22
SPAST-201ENST00000315285 NOS1P29475 1434 aa16.42■□□□□ 0.22
SPAST-201ENST00000315285 CD109Q6YHK3 1445 aa16.42■□□□□ 0.22
SPAST-201ENST00000315285 STK38Q15208 465 aa16.41■□□□□ 0.22
SPAST-201ENST00000315285 ARGLU1Q9NWB6 273 aaPredicted RBP16.41■□□□□ 0.22
SPAST-201ENST00000315285 ESPNB1AK53 854 aa16.41■□□□□ 0.22
SPAST-201ENST00000315285 HMGN5P82970 282 aaKnown RBP16.41■□□□□ 0.22
SPAST-201ENST00000315285 CCDC158Q5M9N0 1113 aa16.41■□□□□ 0.22
SPAST-201ENST00000315285 JAKMIP1Q96N16 626 aaKnown RBP16.41■□□□□ 0.22
SPAST-201ENST00000315285 BRMS1Q9HCU9 246 aa16.41■□□□□ 0.22
SPAST-201ENST00000315285 NSD2O96028 1365 aa16.41■□□□□ 0.22
SPAST-201ENST00000315285 BTBD11A6QL63 1104 aa16.41■□□□□ 0.22
SPAST-201ENST00000315285 FYB1O15117 783 aa16.41■□□□□ 0.22
SPAST-201ENST00000315285 KDM4AO75164 1064 aa16.41■□□□□ 0.22
SPAST-201ENST00000315285 MYL6BP14649 208 aa16.41■□□□□ 0.22
SPAST-201ENST00000315285 FMNL2Q96PY5 1086 aa16.41■□□□□ 0.22
SPAST-201ENST00000315285 SMARCA5O60264 1052 aaPredicted RBP16.4■□□□□ 0.22
SPAST-201ENST00000315285 MX1P20591 662 aa16.4■□□□□ 0.22
SPAST-201ENST00000315285 PDRG1Q9NUG6 133 aa16.4■□□□□ 0.22
SPAST-201ENST00000315285 KIF6Q6ZMV9 814 aa16.4■□□□□ 0.22
SPAST-201ENST00000315285 IGHDP01880 384 aa16.4■□□□□ 0.22
SPAST-201ENST00000315285 IDI1Q13907 227 aa16.4■□□□□ 0.22
SPAST-201ENST00000315285 SPC24Q8NBT2 197 aa16.4■□□□□ 0.22
SPAST-201ENST00000315285 ZSCAN31Q96LW9 406 aaPredicted RBP16.4■□□□□ 0.22
SPAST-201ENST00000315285 C14orf93Q9H972 538 aaKnown RBP16.4■□□□□ 0.22
SPAST-201ENST00000315285 TEX35Q5T0J7 233 aa16.39■□□□□ 0.22
SPAST-201ENST00000315285 NUTM1Q86Y26 1132 aa16.39■□□□□ 0.22
SPAST-201ENST00000315285 TNMDQ9H2S6 317 aa16.39■□□□□ 0.22
SPAST-201ENST00000315285 SMC2O95347 1197 aa16.39■□□□□ 0.21
SPAST-201ENST00000315285 CABP4P57796 275 aa16.39■□□□□ 0.21
SPAST-201ENST00000315285 TTC39AQ5SRH9 613 aa16.39■□□□□ 0.21
SPAST-201ENST00000315285 PDILTQ8N807 584 aa16.39■□□□□ 0.21
SPAST-201ENST00000315285 BCL11BQ9C0K0 894 aaPredicted RBP16.39■□□□□ 0.21
SPAST-201ENST00000315285 ATP2B1P20020 1258 aa16.39■□□□□ 0.21
SPAST-201ENST00000315285 SPG7Q9UQ90 795 aa16.38■□□□□ 0.21
SPAST-201ENST00000315285 RBM42Q9BTD8 480 aaKnown RBP16.38■□□□□ 0.21
SPAST-201ENST00000315285 TRIM34Q9BYJ4 488 aa16.38■□□□□ 0.21
SPAST-201ENST00000315285 UNC13AQ9UPW8 1703 aa16.38■□□□□ 0.21
SPAST-201ENST00000315285 MPNDQ8N594 471 aa16.38■□□□□ 0.21
SPAST-201ENST00000315285 KIF1BPQ96EK5 621 aa16.38■□□□□ 0.21
SPAST-201ENST00000315285 RBM33Q96EV2 1170 aaKnown RBP16.37■□□□□ 0.21
SPAST-201ENST00000315285 FAM177BA6PVY3 158 aa16.37■□□□□ 0.21
SPAST-201ENST00000315285 UPF3BQ9BZI7 483 aaKnown RBP16.37■□□□□ 0.21
SPAST-201ENST00000315285 CNNM1Q9NRU3 951 aa16.37■□□□□ 0.21
SPAST-201ENST00000315285 PARD3Q8TEW0 1356 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms