RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 BMP2KLQ5H9B9 411 aa16.62■□□□□ 0.25
ZNF541-202ENST00000314121 ANKRD20A12PQ8NF67 263 aa16.62■□□□□ 0.25
ZNF541-202ENST00000314121 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
ZNF541-202ENST00000314121 ABTB2Q8N961 1025 aa16.62■□□□□ 0.25
ZNF541-202ENST00000314121 MNS1Q8NEH6 495 aa16.62■□□□□ 0.25
ZNF541-202ENST00000314121 TNPO1Q92973 898 aaKnown RBP16.62■□□□□ 0.25
ZNF541-202ENST00000314121 RRS1Q15050 365 aaKnown RBP16.61■□□□□ 0.25
ZNF541-202ENST00000314121 ANKRD1Q15327 319 aa16.61■□□□□ 0.25
ZNF541-202ENST00000314121 SAFBQ15424 915 aaKnown RBP eCLIP16.61■□□□□ 0.25
ZNF541-202ENST00000314121 IPO7O95373 1038 aaKnown RBP16.61■□□□□ 0.25
ZNF541-202ENST00000314121 PLEKHO1Q53GL0 409 aaPredicted RBP16.6■□□□□ 0.25
ZNF541-202ENST00000314121 NFXL1Q6ZNB6 911 aa16.6■□□□□ 0.25
ZNF541-202ENST00000314121 DHX29Q7Z478 1369 aaKnown RBP16.6■□□□□ 0.25
ZNF541-202ENST00000314121 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
ZNF541-202ENST00000314121 C8orf34Q49A92 452 aa16.6■□□□□ 0.25
ZNF541-202ENST00000314121 WASHC4Q2M389 1173 aa16.59■□□□□ 0.25
ZNF541-202ENST00000314121 LARP1BQ659C4 914 aaKnown RBP16.59■□□□□ 0.25
ZNF541-202ENST00000314121 EXOC6BQ9Y2D4 811 aa16.59■□□□□ 0.25
ZNF541-202ENST00000314121 PDIA4P13667 645 aaKnown RBP16.59■□□□□ 0.25
ZNF541-202ENST00000314121 SRGAP3O43295 1099 aa16.58■□□□□ 0.25
ZNF541-202ENST00000314121 PCDHB15Q9Y5E8 787 aa16.58■□□□□ 0.25
ZNF541-202ENST00000314121 ZSCAN31Q96LW9 406 aaPredicted RBP16.58■□□□□ 0.25
ZNF541-202ENST00000314121 SPC24Q8NBT2 197 aa16.58■□□□□ 0.24
ZNF541-202ENST00000314121 IL1RAPL2Q9NP60 686 aa16.58■□□□□ 0.24
ZNF541-202ENST00000314121 NSD2O96028 1365 aa16.58■□□□□ 0.24
ZNF541-202ENST00000314121 SYCE3A1L190 88 aa16.58■□□□□ 0.24
ZNF541-202ENST00000314121 CCDC70Q6NSX1 233 aa16.58■□□□□ 0.24
ZNF541-202ENST00000314121 RAPGEF3O95398 923 aa16.57■□□□□ 0.24
ZNF541-202ENST00000314121 NLRP2Q9NX02 1062 aa16.57■□□□□ 0.24
ZNF541-202ENST00000314121 TCOF1Q13428 1488 aaKnown RBP16.57■□□□□ 0.24
ZNF541-202ENST00000314121 SSFA2P28290 1259 aa16.57■□□□□ 0.24
ZNF541-202ENST00000314121 HDAC1Q13547 482 aaPredicted RBP16.57■□□□□ 0.24
ZNF541-202ENST00000314121 MPNDQ8N594 471 aa16.57■□□□□ 0.24
ZNF541-202ENST00000314121 TNMDQ9H2S6 317 aa16.57■□□□□ 0.24
ZNF541-202ENST00000314121 PODXL2Q9NZ53 605 aa16.57■□□□□ 0.24
ZNF541-202ENST00000314121 IL16Q14005 1332 aa16.56■□□□□ 0.24
ZNF541-202ENST00000314121 UQCRHLA0A096LP55 91 aa16.56■□□□□ 0.24
ZNF541-202ENST00000314121 MARCH6O60337 910 aa16.56■□□□□ 0.24
ZNF541-202ENST00000314121 UQCRHP07919 91 aa16.56■□□□□ 0.24
ZNF541-202ENST00000314121 UBE2Q2Q8WVN8 375 aa16.56■□□□□ 0.24
ZNF541-202ENST00000314121 ZNF396Q96N95 335 aaPredicted RBP16.56■□□□□ 0.24
ZNF541-202ENST00000314121 BLOC1S2Q6QNY1 142 aa16.56■□□□□ 0.24
ZNF541-202ENST00000314121 TESK2Q96S53 571 aa16.56■□□□□ 0.24
ZNF541-202ENST00000314121 ERICH2A1L162 156 aa16.56■□□□□ 0.24
ZNF541-202ENST00000314121 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
ZNF541-202ENST00000314121 PRAG1Q86YV5 1406 aa16.56■□□□□ 0.24
ZNF541-202ENST00000314121 DHX16O60231 1041 aaKnown RBP16.55■□□□□ 0.24
ZNF541-202ENST00000314121 CLSTN1O94985 981 aa16.55■□□□□ 0.24
ZNF541-202ENST00000314121 UPF3BQ9BZI7 483 aaKnown RBP16.55■□□□□ 0.24
ZNF541-202ENST00000314121 MX1P20591 662 aa16.55■□□□□ 0.24
ZNF541-202ENST00000314121 TBC1D9Q6ZT07 1266 aa16.55■□□□□ 0.24
ZNF541-202ENST00000314121 NUDT16Q96DE0 195 aaKnown RBP16.55■□□□□ 0.24
ZNF541-202ENST00000314121 DNAJC2Q99543 621 aaKnown RBP16.55■□□□□ 0.24
ZNF541-202ENST00000314121 DNAJC5BQ9UF47 199 aa16.55■□□□□ 0.24
ZNF541-202ENST00000314121 PER1O15534 1290 aaPredicted RBP16.54■□□□□ 0.24
ZNF541-202ENST00000314121 NUP160Q12769 1436 aa16.54■□□□□ 0.24
ZNF541-202ENST00000314121 CCDC47Q96A33 483 aaKnown RBP16.54■□□□□ 0.24
ZNF541-202ENST00000314121 MAP4K4O95819 1239 aaPredicted RBP16.54■□□□□ 0.24
ZNF541-202ENST00000314121 EVA1CP58658 441 aa16.54■□□□□ 0.24
ZNF541-202ENST00000314121 DCTN1Q14203 1278 aa16.54■□□□□ 0.24
ZNF541-202ENST00000314121 JAKMIP1Q96N16 626 aaKnown RBP16.54■□□□□ 0.24
ZNF541-202ENST00000314121 C14orf93Q9H972 538 aaKnown RBP16.54■□□□□ 0.24
ZNF541-202ENST00000314121 PDRG1Q9NUG6 133 aa16.54■□□□□ 0.24
ZNF541-202ENST00000314121 CWC27Q6UX04 472 aaKnown RBP16.54■□□□□ 0.24
ZNF541-202ENST00000314121 PPP6R1Q9UPN7 881 aa16.54■□□□□ 0.24
ZNF541-202ENST00000314121 SMARCA5O60264 1052 aaPredicted RBP16.53■□□□□ 0.24
ZNF541-202ENST00000314121 FMNL2Q96PY5 1086 aa16.53■□□□□ 0.24
ZNF541-202ENST00000314121 STK38Q15208 465 aa16.53■□□□□ 0.24
ZNF541-202ENST00000314121 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
ZNF541-202ENST00000314121 CEBPZQ03701 1054 aaKnown RBP16.52■□□□□ 0.24
ZNF541-202ENST00000314121 MCM10Q7L590 875 aa16.52■□□□□ 0.24
ZNF541-202ENST00000314121 NUP62CLQ9H1M0 184 aa16.52■□□□□ 0.24
ZNF541-202ENST00000314121 RNF123Q5XPI4 1314 aa16.52■□□□□ 0.24
ZNF541-202ENST00000314121 ASXL1Q8IXJ9 1541 aa16.52■□□□□ 0.24
ZNF541-202ENST00000314121 FAM135AQ9P2D6 1515 aa16.52■□□□□ 0.23
ZNF541-202ENST00000314121 SMC2O95347 1197 aa16.52■□□□□ 0.23
ZNF541-202ENST00000314121 ZNF530Q6P9A1 599 aaPredicted RBP16.52■□□□□ 0.23
ZNF541-202ENST00000314121 DHX8Q14562 1220 aaKnown RBP16.51■□□□□ 0.23
ZNF541-202ENST00000314121 CCDC112Q8NEF3 446 aa16.51■□□□□ 0.23
ZNF541-202ENST00000314121 BAG4O95429 457 aaKnown RBP16.51■□□□□ 0.23
ZNF541-202ENST00000314121 KLHL40Q2TBA0 621 aa16.51■□□□□ 0.23
ZNF541-202ENST00000314121 STK3Q13188 491 aa16.51■□□□□ 0.23
ZNF541-202ENST00000314121 SPATA32Q96LK8 384 aa16.51■□□□□ 0.23
ZNF541-202ENST00000314121 GLRX3O76003 335 aaKnown RBP16.5■□□□□ 0.23
ZNF541-202ENST00000314121 AACSQ86V21 672 aa16.5■□□□□ 0.23
ZNF541-202ENST00000314121 PLEKHH1Q9ULM0 1364 aa16.5■□□□□ 0.23
ZNF541-202ENST00000314121 CCP110O43303 1012 aa16.5■□□□□ 0.23
ZNF541-202ENST00000314121 NUCB1Q02818 461 aa16.5■□□□□ 0.23
ZNF541-202ENST00000314121 ARHGAP45Q92619 1136 aa16.5■□□□□ 0.23
ZNF541-202ENST00000314121 CFAP45Q9UL16 551 aa16.5■□□□□ 0.23
ZNF541-202ENST00000314121 EMILIN1Q9Y6C2 1016 aa16.5■□□□□ 0.23
ZNF541-202ENST00000314121 KRT32Q14532 448 aa16.5■□□□□ 0.23
ZNF541-202ENST00000314121 PCMTD1Q96MG8 357 aaPredicted RBP16.5■□□□□ 0.23
ZNF541-202ENST00000314121 BCL11BQ9C0K0 894 aaPredicted RBP16.5■□□□□ 0.23
ZNF541-202ENST00000314121 RAB11FIP3O75154 756 aa16.5■□□□□ 0.23
ZNF541-202ENST00000314121 WAPLQ7Z5K2 1190 aa16.5■□□□□ 0.23
ZNF541-202ENST00000314121 ME1P48163 572 aa16.49■□□□□ 0.23
ZNF541-202ENST00000314121 CFAP43Q8NDM7 1665 aa16.49■□□□□ 0.23
ZNF541-202ENST00000314121 JMYQ8N9B5 988 aa16.49■□□□□ 0.23
ZNF541-202ENST00000314121 SIL1Q9H173 461 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms