RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 HSP90AB2PQ58FF8 381 aa14.6□□□□□ -0.07
PTPN2-201ENST00000309660 NGDNQ8NEJ9 315 aaKnown RBP14.6□□□□□ -0.07
PTPN2-201ENST00000309660 FAM135BQ49AJ0 1406 aa14.6□□□□□ -0.07
PTPN2-201ENST00000309660 VAMP4O75379 141 aa14.6□□□□□ -0.07
PTPN2-201ENST00000309660 NUTM2GQ5VZR2 741 aa14.6□□□□□ -0.07
PTPN2-201ENST00000309660 C8orf58Q8NAV2 365 aa14.6□□□□□ -0.07
PTPN2-201ENST00000309660 USP19O94966 1318 aa14.6□□□□□ -0.07
PTPN2-201ENST00000309660 CPSF1Q10570 1443 aaKnown RBP14.6□□□□□ -0.07
PTPN2-201ENST00000309660 CPS1P31327 1500 aa14.6□□□□□ -0.07
PTPN2-201ENST00000309660 KRT24Q2M2I5 525 aa14.6□□□□□ -0.07
PTPN2-201ENST00000309660 TTC21BQ7Z4L5 1316 aa14.59□□□□□ -0.07
PTPN2-201ENST00000309660 MCM10Q7L590 875 aa14.59□□□□□ -0.07
PTPN2-201ENST00000309660 DLC1Q96QB1 1528 aa14.59□□□□□ -0.07
PTPN2-201ENST00000309660 ZBTB40Q9NUA8 1239 aa14.59□□□□□ -0.07
PTPN2-201ENST00000309660 AMOTL2Q9Y2J4 779 aa14.59□□□□□ -0.07
PTPN2-201ENST00000309660 EIF4A2Q14240 407 aaKnown RBP14.58□□□□□ -0.07
PTPN2-201ENST00000309660 C14orf37Q86TY3 774 aa14.58□□□□□ -0.07
PTPN2-201ENST00000309660 BECN1Q14457 450 aa14.58□□□□□ -0.08
PTPN2-201ENST00000309660 ALDH1L2Q3SY69 923 aa14.58□□□□□ -0.08
PTPN2-201ENST00000309660 MAP2P11137 1827 aaKnown RBP14.58□□□□□ -0.08
PTPN2-201ENST00000309660 KIF20BQ96Q89 1820 aa14.58□□□□□ -0.08
PTPN2-201ENST00000309660 LMOD3Q0VAK6 560 aa14.58□□□□□ -0.08
PTPN2-201ENST00000309660 REREQ9P2R6 1566 aa14.57□□□□□ -0.08
PTPN2-201ENST00000309660 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
PTPN2-201ENST00000309660 IFT57Q9NWB7 429 aa14.57□□□□□ -0.08
PTPN2-201ENST00000309660 FRAT2O75474 233 aaPredicted RBP14.57□□□□□ -0.08
PTPN2-201ENST00000309660 ANKRD45Q5TZF3 282 aa14.57□□□□□ -0.08
PTPN2-201ENST00000309660 MIS18AQ9NYP9 233 aa14.57□□□□□ -0.08
PTPN2-201ENST00000309660 USP35Q9P2H5 1018 aa14.56□□□□□ -0.08
PTPN2-201ENST00000309660 ANKRD26Q9UPS8 1709 aa14.56□□□□□ -0.08
PTPN2-201ENST00000309660 HDAC1Q13547 482 aaPredicted RBP14.56□□□□□ -0.08
PTPN2-201ENST00000309660 MRPL50Q8N5N7 158 aaKnown RBP14.56□□□□□ -0.08
PTPN2-201ENST00000309660 RBM33Q96EV2 1170 aaKnown RBP14.56□□□□□ -0.08
PTPN2-201ENST00000309660 CFAP44Q96MT7 982 aa14.56□□□□□ -0.08
PTPN2-201ENST00000309660 NRXN3Q9Y4C0 1643 aa14.55□□□□□ -0.08
PTPN2-201ENST00000309660 APBB1O00213 710 aa14.54□□□□□ -0.08
PTPN2-201ENST00000309660 AMPHP49418 695 aa14.54□□□□□ -0.08
PTPN2-201ENST00000309660 LTV1Q96GA3 475 aaPredicted RBP14.54□□□□□ -0.08
PTPN2-201ENST00000309660 ZBTB7CA1YPR0 619 aa14.53□□□□□ -0.08
PTPN2-201ENST00000309660 AATKQ6ZMQ8 1374 aa14.53□□□□□ -0.08
PTPN2-201ENST00000309660 ADAMTS13Q76LX8 1427 aa14.53□□□□□ -0.08
PTPN2-201ENST00000309660 FOXO3O43524 673 aa14.53□□□□□ -0.08
PTPN2-201ENST00000309660 SMC5Q8IY18 1101 aa14.53□□□□□ -0.08
PTPN2-201ENST00000309660 CDK12Q9NYV4 1490 aaPredicted RBP14.53□□□□□ -0.08
PTPN2-201ENST00000309660 SIRT1Q96EB6 747 aa14.52□□□□□ -0.08
PTPN2-201ENST00000309660 TBC1D32Q96NH3 1257 aa14.52□□□□□ -0.08
PTPN2-201ENST00000309660 ZBTB7BO15156 539 aaPredicted RBP14.52□□□□□ -0.09
PTPN2-201ENST00000309660 SETD1AO15047 1707 aaKnown RBP14.52□□□□□ -0.09
PTPN2-201ENST00000309660 NLRP6P59044 892 aa14.51□□□□□ -0.09
PTPN2-201ENST00000309660 CHD1LQ86WJ1 897 aa14.51□□□□□ -0.09
PTPN2-201ENST00000309660 ZNF428Q96B54 188 aa14.51□□□□□ -0.09
PTPN2-201ENST00000309660 C22orf23Q9BZE7 217 aa14.51□□□□□ -0.09
PTPN2-201ENST00000309660 CDC42BPGQ6DT37 1551 aa14.51□□□□□ -0.09
PTPN2-201ENST00000309660 ZNF853P0CG23 659 aa14.51□□□□□ -0.09
PTPN2-201ENST00000309660 RTF1Q92541 710 aaKnown RBP14.51□□□□□ -0.09
PTPN2-201ENST00000309660 MAP3K19Q56UN5 1328 aa14.5□□□□□ -0.09
PTPN2-201ENST00000309660 KIF13AQ9H1H9 1805 aa14.5□□□□□ -0.09
PTPN2-201ENST00000309660 NUCB1Q02818 461 aa14.49□□□□□ -0.09
PTPN2-201ENST00000309660 NECTIN2Q92692 538 aa14.49□□□□□ -0.09
PTPN2-201ENST00000309660 TBC1D2Q9BYX2 928 aa14.49□□□□□ -0.09
PTPN2-201ENST00000309660 API5Q9BZZ5 524 aaKnown RBP14.49□□□□□ -0.09
PTPN2-201ENST00000309660 TECPR2O15040 1411 aa14.49□□□□□ -0.09
PTPN2-201ENST00000309660 PLEKHG3A1L390 1219 aa14.49□□□□□ -0.09
PTPN2-201ENST00000309660 SLC4A10Q6U841 1118 aa14.49□□□□□ -0.09
PTPN2-201ENST00000309660 PLEKHG1Q9ULL1 1385 aa14.49□□□□□ -0.09
PTPN2-201ENST00000309660 THEMISQ8N1K5 641 aaPredicted RBP14.49□□□□□ -0.09
PTPN2-201ENST00000309660 PTPRUQ92729 1446 aa14.48□□□□□ -0.09
PTPN2-201ENST00000309660 CHMP4BQ9H444 224 aaKnown RBP14.48□□□□□ -0.09
PTPN2-201ENST00000309660 USP6P35125 1406 aa14.48□□□□□ -0.09
PTPN2-201ENST00000309660 KCNA6P17658 529 aa14.47□□□□□ -0.09
PTPN2-201ENST00000309660 GSE1Q14687 1217 aa14.47□□□□□ -0.09
PTPN2-201ENST00000309660 TSPYL4Q9UJ04 414 aa14.47□□□□□ -0.09
PTPN2-201ENST00000309660 ARHGAP45Q92619 1136 aa14.47□□□□□ -0.09
PTPN2-201ENST00000309660 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
PTPN2-201ENST00000309660 MTHFSDQ2M296 383 aaKnown RBP14.46□□□□□ -0.09
PTPN2-201ENST00000309660 SIRT2Q8IXJ6 389 aa14.46□□□□□ -0.09
PTPN2-201ENST00000309660 ARXQ96QS3 562 aa14.46□□□□□ -0.09
PTPN2-201ENST00000309660 ABTB2Q8N961 1025 aa14.46□□□□□ -0.1
PTPN2-201ENST00000309660 UBR1Q8IWV7 1749 aa14.45□□□□□ -0.1
PTPN2-201ENST00000309660 RTN4Q9NQC3 1192 aaKnown RBP14.45□□□□□ -0.1
PTPN2-201ENST00000309660 TBX22Q9Y458 520 aa14.45□□□□□ -0.1
PTPN2-201ENST00000309660 ABCC4O15439 1325 aa14.44□□□□□ -0.1
PTPN2-201ENST00000309660 F6X3S4 739 aa14.44□□□□□ -0.1
PTPN2-201ENST00000309660 USHBP1Q8N6Y0 703 aa14.44□□□□□ -0.1
PTPN2-201ENST00000309660 GCC1Q96CN9 775 aa14.44□□□□□ -0.1
PTPN2-201ENST00000309660 EYA1Q99502 592 aa14.44□□□□□ -0.1
PTPN2-201ENST00000309660 BRPF1P55201 1214 aaPredicted RBP14.44□□□□□ -0.1
PTPN2-201ENST00000309660 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.44□□□□□ -0.1
PTPN2-201ENST00000309660 CHL1O00533 1208 aa14.43□□□□□ -0.1
PTPN2-201ENST00000309660 ITSN1Q15811 1721 aa14.43□□□□□ -0.1
PTPN2-201ENST00000309660 LMOD2Q6P5Q4 547 aa14.43□□□□□ -0.1
PTPN2-201ENST00000309660 OVOS2A0A0J9YW53 1432 aa14.42□□□□□ -0.1
PTPN2-201ENST00000309660 OVOS2Q6IE36 1432 aa14.42□□□□□ -0.1
PTPN2-201ENST00000309660 HSCBQ8IWL3 235 aa14.42□□□□□ -0.1
PTPN2-201ENST00000309660 HAP1P54257 671 aaPredicted RBP14.42□□□□□ -0.1
PTPN2-201ENST00000309660 C16orf71Q8IYS4 520 aaPredicted RBP14.42□□□□□ -0.1
PTPN2-201ENST00000309660 MEIS3Q99687 375 aa14.42□□□□□ -0.1
PTPN2-201ENST00000309660 FOXD4L1Q9NU39 408 aa14.42□□□□□ -0.1
PTPN2-201ENST00000309660 PTCH1Q13635 1447 aa14.42□□□□□ -0.1
PTPN2-201ENST00000309660 G2E3Q7L622 706 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms