RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 DDX19BQ9UMR2 479 aa20.89■□□□□ 0.94
SYVN1-202ENST00000307289 HSP90AB2PQ58FF8 381 aa20.89■□□□□ 0.93
SYVN1-202ENST00000307289 BCL11AQ9H165 835 aa20.89■□□□□ 0.93
SYVN1-202ENST00000307289 TECPR2O15040 1411 aa20.89■□□□□ 0.93
SYVN1-202ENST00000307289 UBR1Q8IWV7 1749 aa20.88■□□□□ 0.93
SYVN1-202ENST00000307289 PTPRUQ92729 1446 aa20.88■□□□□ 0.93
SYVN1-202ENST00000307289 EIF4A2Q14240 407 aaKnown RBP20.88■□□□□ 0.93
SYVN1-202ENST00000307289 SULT6B1Q6IMI4 303 aa20.88■□□□□ 0.93
SYVN1-202ENST00000307289 TTC21BQ7Z4L5 1316 aa20.88■□□□□ 0.93
SYVN1-202ENST00000307289 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.88■□□□□ 0.93
SYVN1-202ENST00000307289 AAMPQ13685 434 aa20.86■□□□□ 0.93
SYVN1-202ENST00000307289 CDK12Q9NYV4 1490 aaPredicted RBP20.86■□□□□ 0.93
SYVN1-202ENST00000307289 AATKQ6ZMQ8 1374 aa20.85■□□□□ 0.93
SYVN1-202ENST00000307289 NFKBIBQ15653 356 aa20.85■□□□□ 0.93
SYVN1-202ENST00000307289 MRPL50Q8N5N7 158 aaKnown RBP20.85■□□□□ 0.93
SYVN1-202ENST00000307289 AMOTL2Q9Y2J4 779 aa20.85■□□□□ 0.93
SYVN1-202ENST00000307289 SIRT1Q96EB6 747 aa20.85■□□□□ 0.93
SYVN1-202ENST00000307289 KIF16BQ96L93 1317 aa20.85■□□□□ 0.93
SYVN1-202ENST00000307289 ZNF853P0CG23 659 aa20.84■□□□□ 0.93
SYVN1-202ENST00000307289 MCM10Q7L590 875 aa20.84■□□□□ 0.93
SYVN1-202ENST00000307289 ZNF692Q9BU19 519 aaPredicted RBP20.84■□□□□ 0.93
SYVN1-202ENST00000307289 ALDH1L2Q3SY69 923 aa20.83■□□□□ 0.93
SYVN1-202ENST00000307289 IPO8O15397 1037 aaKnown RBP20.83■□□□□ 0.92
SYVN1-202ENST00000307289 HDAC1Q13547 482 aaPredicted RBP20.83■□□□□ 0.92
SYVN1-202ENST00000307289 TWISTNBQ3B726 338 aaPredicted RBP20.83■□□□□ 0.92
SYVN1-202ENST00000307289 MON2Q7Z3U7 1717 aa20.83■□□□□ 0.92
SYVN1-202ENST00000307289 IFT57Q9NWB7 429 aa20.82■□□□□ 0.92
SYVN1-202ENST00000307289 C3P01024 1663 aa20.82■□□□□ 0.92
SYVN1-202ENST00000307289 GNAI1P63096 354 aa20.82■□□□□ 0.92
SYVN1-202ENST00000307289 LNPKQ9C0E8 428 aa20.82■□□□□ 0.92
SYVN1-202ENST00000307289 MIS18AQ9NYP9 233 aa20.81■□□□□ 0.92
SYVN1-202ENST00000307289 NUTM2GQ5VZR2 741 aa20.81■□□□□ 0.92
SYVN1-202ENST00000307289 FOXO3O43524 673 aa20.8■□□□□ 0.92
SYVN1-202ENST00000307289 RBM33Q96EV2 1170 aaKnown RBP20.8■□□□□ 0.92
SYVN1-202ENST00000307289 CFAP44Q96MT7 982 aa20.8■□□□□ 0.92
SYVN1-202ENST00000307289 VIRMAQ69YN4 1812 aaKnown RBP20.8■□□□□ 0.92
SYVN1-202ENST00000307289 DLG5Q8TDM6 1919 aa20.8■□□□□ 0.92
SYVN1-202ENST00000307289 KNDC1Q76NI1 1749 aa20.8■□□□□ 0.92
SYVN1-202ENST00000307289 ZBTB7BO15156 539 aaPredicted RBP20.8■□□□□ 0.92
SYVN1-202ENST00000307289 SMC5Q8IY18 1101 aa20.8■□□□□ 0.92
SYVN1-202ENST00000307289 PLEKHG1Q9ULL1 1385 aa20.8■□□□□ 0.92
SYVN1-202ENST00000307289 FRAT2O75474 233 aaPredicted RBP20.79■□□□□ 0.92
SYVN1-202ENST00000307289 SLKQ9H2G2 1235 aaPredicted RBP20.79■□□□□ 0.92
SYVN1-202ENST00000307289 AKAP12Q02952 1782 aa20.79■□□□□ 0.92
SYVN1-202ENST00000307289 PLEKHG3A1L390 1219 aa20.78■□□□□ 0.92
SYVN1-202ENST00000307289 MFAP1P55081 439 aaKnown RBP20.78■□□□□ 0.92
SYVN1-202ENST00000307289 EID1Q9Y6B2 187 aa20.78■□□□□ 0.92
SYVN1-202ENST00000307289 ITSN1Q15811 1721 aa20.78■□□□□ 0.92
SYVN1-202ENST00000307289 SPRYD3Q8NCJ5 442 aa20.77■□□□□ 0.92
SYVN1-202ENST00000307289 USP6P35125 1406 aa20.77■□□□□ 0.92
SYVN1-202ENST00000307289 SIRT2Q8IXJ6 389 aa20.77■□□□□ 0.92
SYVN1-202ENST00000307289 TBC1D32Q96NH3 1257 aa20.77■□□□□ 0.92
SYVN1-202ENST00000307289 MAP3K19Q56UN5 1328 aa20.75■□□□□ 0.91
SYVN1-202ENST00000307289 OVOS2A0A0J9YW53 1432 aa20.75■□□□□ 0.91
SYVN1-202ENST00000307289 OVOS2Q6IE36 1432 aa20.75■□□□□ 0.91
SYVN1-202ENST00000307289 NGDNQ8NEJ9 315 aaKnown RBP20.74■□□□□ 0.91
SYVN1-202ENST00000307289 PEAK1Q9H792 1746 aa20.74■□□□□ 0.91
SYVN1-202ENST00000307289 CALD1Q05682 793 aaKnown RBP20.74■□□□□ 0.91
SYVN1-202ENST00000307289 NUCB1Q02818 461 aa20.73■□□□□ 0.91
SYVN1-202ENST00000307289 BRPF1P55201 1214 aaPredicted RBP20.73■□□□□ 0.91
SYVN1-202ENST00000307289 ANKRD45Q5TZF3 282 aa20.73■□□□□ 0.91
SYVN1-202ENST00000307289 USP35Q9P2H5 1018 aa20.72■□□□□ 0.91
SYVN1-202ENST00000307289 CHD1LQ86WJ1 897 aa20.72■□□□□ 0.91
SYVN1-202ENST00000307289 TBC1D2Q9BYX2 928 aa20.72■□□□□ 0.91
SYVN1-202ENST00000307289 KCNA6P17658 529 aa20.71■□□□□ 0.91
SYVN1-202ENST00000307289 LMOD3Q0VAK6 560 aa20.71■□□□□ 0.91
SYVN1-202ENST00000307289 NRKQ7Z2Y5 1582 aa20.71■□□□□ 0.91
SYVN1-202ENST00000307289 ABCC4O15439 1325 aa20.7■□□□□ 0.9
SYVN1-202ENST00000307289 UPF2Q9HAU5 1272 aaKnown RBP20.7■□□□□ 0.9
SYVN1-202ENST00000307289 RGPD8O14715 1765 aaPredicted RBP20.7■□□□□ 0.9
SYVN1-202ENST00000307289 PTCH1Q13635 1447 aa20.7■□□□□ 0.9
SYVN1-202ENST00000307289 MTHFSDQ2M296 383 aaKnown RBP20.69■□□□□ 0.9
SYVN1-202ENST00000307289 ZNF428Q96B54 188 aa20.69■□□□□ 0.9
SYVN1-202ENST00000307289 SSH2Q76I76 1423 aa20.69■□□□□ 0.9
SYVN1-202ENST00000307289 ARHGAP45Q92619 1136 aa20.68■□□□□ 0.9
SYVN1-202ENST00000307289 RIMS1Q86UR5 1692 aaKnown RBP20.68■□□□□ 0.9
SYVN1-202ENST00000307289 TBX22Q9Y458 520 aa20.68■□□□□ 0.9
SYVN1-202ENST00000307289 TOPAZ1Q8N9V7 1692 aa20.68■□□□□ 0.9
SYVN1-202ENST00000307289 CHL1O00533 1208 aa20.68■□□□□ 0.9
SYVN1-202ENST00000307289 C22orf23Q9BZE7 217 aa20.68■□□□□ 0.9
SYVN1-202ENST00000307289 PLEKHG5O94827 1062 aa20.67■□□□□ 0.9
SYVN1-202ENST00000307289 EYA1Q99502 592 aa20.67■□□□□ 0.9
SYVN1-202ENST00000307289 TRHP20396 242 aaPredicted RBP20.66■□□□□ 0.9
SYVN1-202ENST00000307289 NLRP6P59044 892 aa20.66■□□□□ 0.9
SYVN1-202ENST00000307289 LTV1Q96GA3 475 aaPredicted RBP20.66■□□□□ 0.9
SYVN1-202ENST00000307289 PIK3R4Q99570 1358 aa20.66■□□□□ 0.9
SYVN1-202ENST00000307289 USP31Q70CQ4 1352 aa20.66■□□□□ 0.9
SYVN1-202ENST00000307289 AMPHP49418 695 aa20.66■□□□□ 0.9
SYVN1-202ENST00000307289 THEMISQ8N1K5 641 aaPredicted RBP20.64■□□□□ 0.9
SYVN1-202ENST00000307289 BECN1Q14457 450 aa20.64■□□□□ 0.89
SYVN1-202ENST00000307289 G2E3Q7L622 706 aa20.63■□□□□ 0.89
SYVN1-202ENST00000307289 C16orf71Q8IYS4 520 aaPredicted RBP20.63■□□□□ 0.89
SYVN1-202ENST00000307289 APBB1O00213 710 aa20.63■□□□□ 0.89
SYVN1-202ENST00000307289 C14orf37Q86TY3 774 aa20.63■□□□□ 0.89
SYVN1-202ENST00000307289 ANTXR1Q9H6X2 564 aa20.63■□□□□ 0.89
SYVN1-202ENST00000307289 ARHGAP23Q9P227 1491 aa20.62■□□□□ 0.89
SYVN1-202ENST00000307289 NECTIN2Q92692 538 aa20.62■□□□□ 0.89
SYVN1-202ENST00000307289 DIP2AQ14689 1571 aa20.62■□□□□ 0.89
SYVN1-202ENST00000307289 CEP170BQ9Y4F5 1589 aaPredicted RBP20.62■□□□□ 0.89
SYVN1-202ENST00000307289 F6X3S4 739 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms