RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 FAM177BA6PVY3 158 aa15.78■□□□□ 0.12
TRIM35-201ENST00000305364 FIBPO43427 364 aa15.78■□□□□ 0.12
TRIM35-201ENST00000305364 ZNF500O60304 480 aaPredicted RBP15.78■□□□□ 0.12
TRIM35-201ENST00000305364 MCM2P49736 904 aa15.78■□□□□ 0.12
TRIM35-201ENST00000305364 PPP4R3BQ5MIZ7 849 aa15.78■□□□□ 0.12
TRIM35-201ENST00000305364 TTC22Q5TAA0 569 aa15.77■□□□□ 0.12
TRIM35-201ENST00000305364 ZNF592Q92610 1267 aa15.77■□□□□ 0.12
TRIM35-201ENST00000305364 SMAP1Q8IYB5 467 aaPredicted RBP15.77■□□□□ 0.12
TRIM35-201ENST00000305364 PDCL2Q8N4E4 241 aa15.77■□□□□ 0.12
TRIM35-201ENST00000305364 UPF3BQ9BZI7 483 aaKnown RBP15.77■□□□□ 0.12
TRIM35-201ENST00000305364 SPDYE4A6NLX3 237 aa15.77■□□□□ 0.11
TRIM35-201ENST00000305364 OS9Q13438 667 aaPredicted RBP15.76■□□□□ 0.11
TRIM35-201ENST00000305364 TSC1Q92574 1164 aa15.76■□□□□ 0.11
TRIM35-201ENST00000305364 TTC12Q9H892 705 aaPredicted RBP15.76■□□□□ 0.11
TRIM35-201ENST00000305364 ATP6V1DQ9Y5K8 247 aa15.76■□□□□ 0.11
TRIM35-201ENST00000305364 TMEM63CQ9P1W3 806 aa15.76■□□□□ 0.11
TRIM35-201ENST00000305364 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.76■□□□□ 0.11
TRIM35-201ENST00000305364 ZBTB7BO15156 539 aaPredicted RBP15.76■□□□□ 0.11
TRIM35-201ENST00000305364 CCDC94Q9BW85 323 aaPredicted RBP15.76■□□□□ 0.11
TRIM35-201ENST00000305364 TRIM35Q9UPQ4 493 aa15.76■□□□□ 0.11
TRIM35-201ENST00000305364 SYNMO15061 1565 aa15.76■□□□□ 0.11
TRIM35-201ENST00000305364 FCHSD2O94868 740 aa15.76■□□□□ 0.11
TRIM35-201ENST00000305364 IL16Q14005 1332 aa15.75■□□□□ 0.11
TRIM35-201ENST00000305364 SDSP20132 328 aa15.75■□□□□ 0.11
TRIM35-201ENST00000305364 IFT57Q9NWB7 429 aa15.75■□□□□ 0.11
TRIM35-201ENST00000305364 CLASP1Q7Z460 1538 aa15.75■□□□□ 0.11
TRIM35-201ENST00000305364 FAM184AQ8NB25 1140 aa15.75■□□□□ 0.11
TRIM35-201ENST00000305364 NOLC1Q14978 699 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRIM35-201ENST00000305364 USP26Q9BXU7 913 aa15.75■□□□□ 0.11
TRIM35-201ENST00000305364 TARBP1Q13395 1621 aaKnown RBP15.75■□□□□ 0.11
TRIM35-201ENST00000305364 PLEKHM2Q8IWE5 1019 aa15.74■□□□□ 0.11
TRIM35-201ENST00000305364 TMX3Q96JJ7 454 aa15.74■□□□□ 0.11
TRIM35-201ENST00000305364 ABCC10Q5T3U5 1492 aa15.74■□□□□ 0.11
TRIM35-201ENST00000305364 ADCY5O95622 1261 aa15.74■□□□□ 0.11
TRIM35-201ENST00000305364 SMC3Q9UQE7 1217 aa15.74■□□□□ 0.11
TRIM35-201ENST00000305364 WDR33Q9C0J8 1336 aaKnown RBP15.74■□□□□ 0.11
TRIM35-201ENST00000305364 VPS37CA5D8V6 355 aaPredicted RBP15.73■□□□□ 0.11
TRIM35-201ENST00000305364 TSPYL6Q8N831 410 aa15.73■□□□□ 0.11
TRIM35-201ENST00000305364 RTF1Q92541 710 aaKnown RBP15.73■□□□□ 0.11
TRIM35-201ENST00000305364 STK31Q9BXU1 1019 aa15.73■□□□□ 0.11
TRIM35-201ENST00000305364 LMOD2Q6P5Q4 547 aa15.73■□□□□ 0.11
TRIM35-201ENST00000305364 GPT2Q8TD30 523 aa15.73■□□□□ 0.11
TRIM35-201ENST00000305364 PRIMPOLQ96LW4 560 aa15.73■□□□□ 0.11
TRIM35-201ENST00000305364 DUOX2Q9NRD8 1548 aa15.73■□□□□ 0.11
TRIM35-201ENST00000305364 FBLN1P23142 703 aa15.73■□□□□ 0.11
TRIM35-201ENST00000305364 NFE2L2Q16236 605 aa15.73■□□□□ 0.11
TRIM35-201ENST00000305364 HCLS1P14317 486 aaPredicted RBP15.72■□□□□ 0.11
TRIM35-201ENST00000305364 RPAP2Q8IXW5 612 aaPredicted RBP15.72■□□□□ 0.11
TRIM35-201ENST00000305364 DCTN1Q14203 1278 aa15.72■□□□□ 0.11
TRIM35-201ENST00000305364 C17orf53Q8N3J3 647 aaPredicted RBP15.72■□□□□ 0.11
TRIM35-201ENST00000305364 NOS1P29475 1434 aa15.71■□□□□ 0.11
TRIM35-201ENST00000305364 IGSF3O75054 1194 aa15.71■□□□□ 0.11
TRIM35-201ENST00000305364 MRPL50Q8N5N7 158 aaKnown RBP15.71■□□□□ 0.11
TRIM35-201ENST00000305364 OTUD7AQ8TE49 926 aaPredicted RBP15.71■□□□□ 0.11
TRIM35-201ENST00000305364 LETM1O95202 739 aaPredicted RBP15.71■□□□□ 0.11
TRIM35-201ENST00000305364 IBTKQ9P2D0 1353 aaPredicted RBP15.71■□□□□ 0.1
TRIM35-201ENST00000305364 ZRSR1Q15695 479 aaKnown RBP15.7■□□□□ 0.1
TRIM35-201ENST00000305364 KIF2CQ99661 725 aa15.7■□□□□ 0.1
TRIM35-201ENST00000305364 CROCC2H7BZ55 1655 aa15.7■□□□□ 0.1
TRIM35-201ENST00000305364 VAMP4O75379 141 aa15.7■□□□□ 0.1
TRIM35-201ENST00000305364 TSHZ3Q63HK5 1081 aa15.7■□□□□ 0.1
TRIM35-201ENST00000305364 EXOC6BQ9Y2D4 811 aa15.7■□□□□ 0.1
TRIM35-201ENST00000305364 GSPT1P15170 499 aaKnown RBP15.7■□□□□ 0.1
TRIM35-201ENST00000305364 CABP1Q9NZU7 370 aa15.7■□□□□ 0.1
TRIM35-201ENST00000305364 ARHGAP45Q92619 1136 aa15.69■□□□□ 0.1
TRIM35-201ENST00000305364 NECTIN2Q92692 538 aa15.69■□□□□ 0.1
TRIM35-201ENST00000305364 MBIPQ9NS73 344 aa15.69■□□□□ 0.1
TRIM35-201ENST00000305364 PTPRTO14522 1441 aa15.69■□□□□ 0.1
TRIM35-201ENST00000305364 KDM5AP29375 1690 aaKnown RBP15.69■□□□□ 0.1
TRIM35-201ENST00000305364 ERVK-7P63135 1459 aa15.69■□□□□ 0.1
TRIM35-201ENST00000305364 DDIT3P35638 169 aa15.69■□□□□ 0.1
TRIM35-201ENST00000305364 CCDC183Q5T5S1 534 aa15.68■□□□□ 0.1
TRIM35-201ENST00000305364 MYRIPQ8NFW9 859 aa15.68■□□□□ 0.1
TRIM35-201ENST00000305364 PRAM1Q96QH2 718 aa15.68■□□□□ 0.1
TRIM35-201ENST00000305364 PHF23Q9BUL5 403 aaPredicted RBP15.68■□□□□ 0.1
TRIM35-201ENST00000305364 ATAD2Q6PL18 1390 aa15.68■□□□□ 0.1
TRIM35-201ENST00000305364 ARHGEF5Q12774 1597 aa15.68■□□□□ 0.1
TRIM35-201ENST00000305364 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.68■□□□□ 0.1
TRIM35-201ENST00000305364 SLC4A2P04920 1241 aa15.68■□□□□ 0.1
TRIM35-201ENST00000305364 C14orf93Q9H972 538 aaKnown RBP15.68■□□□□ 0.1
TRIM35-201ENST00000305364 ADCY10Q96PN6 1610 aa15.68■□□□□ 0.1
TRIM35-201ENST00000305364 TPM3P06753 285 aa15.67■□□□□ 0.1
TRIM35-201ENST00000305364 DCTPP1Q9H773 170 aa15.67■□□□□ 0.1
TRIM35-201ENST00000305364 USP48Q86UV5 1035 aa15.67■□□□□ 0.1
TRIM35-201ENST00000305364 LARP6Q9BRS8 491 aaKnown RBP15.67■□□□□ 0.1
TRIM35-201ENST00000305364 TRIM5Q9C035 493 aa15.67■□□□□ 0.1
TRIM35-201ENST00000305364 NSD2O96028 1365 aa15.67■□□□□ 0.1
TRIM35-201ENST00000305364 A0A0G2JS52 829 aa15.67■□□□□ 0.1
TRIM35-201ENST00000305364 FGD1P98174 961 aa15.67■□□□□ 0.1
TRIM35-201ENST00000305364 FYB1O15117 783 aa15.66■□□□□ 0.1
TRIM35-201ENST00000305364 COG3Q96JB2 828 aa15.66■□□□□ 0.1
TRIM35-201ENST00000305364 MAST1Q9Y2H9 1570 aa15.66■□□□□ 0.1
TRIM35-201ENST00000305364 C8orf58Q8NAV2 365 aa15.66■□□□□ 0.1
TRIM35-201ENST00000305364 NSFL1CQ9UNZ2 370 aaKnown RBP15.66■□□□□ 0.1
TRIM35-201ENST00000305364 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.66■□□□□ 0.1
TRIM35-201ENST00000305364 CDC42BPAQ5VT25 1732 aa15.66■□□□□ 0.1
TRIM35-201ENST00000305364 ANKRD36BQ8N2N9 1353 aa15.66■□□□□ 0.1
TRIM35-201ENST00000305364 FAM83GA6ND36 823 aa15.66■□□□□ 0.1
TRIM35-201ENST00000305364 FKBP5Q13451 457 aaPredicted RBP15.66■□□□□ 0.1
TRIM35-201ENST00000305364 TPD52L1Q16890 204 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms