RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 PDZRN3Q9UPQ7 1066 aa12.13□□□□□ -0.47
PRPF8-201ENST00000304992 SRGAP3O43295 1099 aa12.13□□□□□ -0.47
PRPF8-201ENST00000304992 CCT4P50991 539 aaKnown RBP12.13□□□□□ -0.47
PRPF8-201ENST00000304992 NACAP1Q9BZK3 213 aa12.13□□□□□ -0.47
PRPF8-201ENST00000304992 FMNL2Q96PY5 1086 aa12.13□□□□□ -0.47
PRPF8-201ENST00000304992 LRRCC1Q9C099 1032 aa12.13□□□□□ -0.47
PRPF8-201ENST00000304992 HIP1O00291 1037 aa12.13□□□□□ -0.47
PRPF8-201ENST00000304992 TMOD3Q9NYL9 352 aa12.13□□□□□ -0.47
PRPF8-201ENST00000304992 STARD3NLO95772 234 aa12.12□□□□□ -0.47
PRPF8-201ENST00000304992 ABCF2Q9UG63 623 aa12.12□□□□□ -0.47
PRPF8-201ENST00000304992 CCDC61Q9Y6R9 512 aa12.12□□□□□ -0.47
PRPF8-201ENST00000304992 THUMPD2Q9BTF0 503 aaKnown RBP12.12□□□□□ -0.47
PRPF8-201ENST00000304992 ZPR1O75312 459 aa12.12□□□□□ -0.47
PRPF8-201ENST00000304992 BRPF1P55201 1214 aaPredicted RBP12.12□□□□□ -0.47
PRPF8-201ENST00000304992 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
PRPF8-201ENST00000304992 LRP2BPQ9P2M1 347 aa12.12□□□□□ -0.47
PRPF8-201ENST00000304992 CDK13Q14004 1512 aaKnown RBP12.12□□□□□ -0.47
PRPF8-201ENST00000304992 FBXO31Q5XUX0 539 aaPredicted RBP12.12□□□□□ -0.47
PRPF8-201ENST00000304992 MCM10Q7L590 875 aa12.12□□□□□ -0.47
PRPF8-201ENST00000304992 EHBP1L1Q8N3D4 1523 aa12.12□□□□□ -0.47
PRPF8-201ENST00000304992 CD109Q6YHK3 1445 aa12.12□□□□□ -0.47
PRPF8-201ENST00000304992 TDO2P48775 406 aa12.12□□□□□ -0.47
PRPF8-201ENST00000304992 DCTN1Q14203 1278 aa12.12□□□□□ -0.47
PRPF8-201ENST00000304992 ERICH3Q5RHP9 1530 aa12.11□□□□□ -0.47
PRPF8-201ENST00000304992 IGHMBP2P38935 993 aaKnown RBP12.11□□□□□ -0.47
PRPF8-201ENST00000304992 GSE1Q14687 1217 aa12.11□□□□□ -0.47
PRPF8-201ENST00000304992 CEP126Q9P2H0 1117 aa12.11□□□□□ -0.47
PRPF8-201ENST00000304992 CCDC69A6NI79 296 aa12.11□□□□□ -0.47
PRPF8-201ENST00000304992 GNAT3A8MTJ3 354 aa12.11□□□□□ -0.47
PRPF8-201ENST00000304992 HECW1Q76N89 1606 aa12.11□□□□□ -0.47
PRPF8-201ENST00000304992 RNF214Q8ND24 703 aa12.11□□□□□ -0.47
PRPF8-201ENST00000304992 IDH1O75874 414 aaKnown RBP12.11□□□□□ -0.47
PRPF8-201ENST00000304992 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
PRPF8-201ENST00000304992 MPHOSPH10O00566 681 aaKnown RBP12.1□□□□□ -0.47
PRPF8-201ENST00000304992 HSP90AB2PQ58FF8 381 aa12.1□□□□□ -0.47
PRPF8-201ENST00000304992 TXLNAP40222 546 aa12.1□□□□□ -0.47
PRPF8-201ENST00000304992 KCNH5Q8NCM2 988 aa12.1□□□□□ -0.47
PRPF8-201ENST00000304992 IFT57Q9NWB7 429 aa12.1□□□□□ -0.47
PRPF8-201ENST00000304992 AMOTL2Q9Y2J4 779 aa12.09□□□□□ -0.47
PRPF8-201ENST00000304992 FIBPO43427 364 aa12.09□□□□□ -0.47
PRPF8-201ENST00000304992 ATAD2Q6PL18 1390 aa12.09□□□□□ -0.47
PRPF8-201ENST00000304992 CHMP4BP1P59074 171 aa12.09□□□□□ -0.47
PRPF8-201ENST00000304992 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
PRPF8-201ENST00000304992 NSD3Q9BZ95 1437 aa12.09□□□□□ -0.47
PRPF8-201ENST00000304992 STK38Q15208 465 aa12.09□□□□□ -0.47
PRPF8-201ENST00000304992 RPGRIP1LQ68CZ1 1315 aa12.09□□□□□ -0.47
PRPF8-201ENST00000304992 METTL24Q5JXM2 366 aa12.08□□□□□ -0.47
PRPF8-201ENST00000304992 SOGA3Q5TF21 947 aa12.08□□□□□ -0.47
PRPF8-201ENST00000304992 USP5P45974 858 aa12.08□□□□□ -0.48
PRPF8-201ENST00000304992 ANKIB1Q9P2G1 1089 aa12.08□□□□□ -0.48
PRPF8-201ENST00000304992 DNAJC5BQ9UF47 199 aa12.08□□□□□ -0.48
PRPF8-201ENST00000304992 DAPK1P53355 1430 aa12.08□□□□□ -0.48
PRPF8-201ENST00000304992 KINO60870 393 aaKnown RBP12.08□□□□□ -0.48
PRPF8-201ENST00000304992 CWC27Q6UX04 472 aaKnown RBP12.08□□□□□ -0.48
PRPF8-201ENST00000304992 NME9Q86XW9 330 aa12.08□□□□□ -0.48
PRPF8-201ENST00000304992 GCC1Q96CN9 775 aa12.08□□□□□ -0.48
PRPF8-201ENST00000304992 NAT10Q9H0A0 1025 aaKnown RBP12.08□□□□□ -0.48
PRPF8-201ENST00000304992 TRIM22Q8IYM9 498 aa12.08□□□□□ -0.48
PRPF8-201ENST00000304992 CYP46A1Q9Y6A2 500 aa12.07□□□□□ -0.48
PRPF8-201ENST00000304992 AAMPQ13685 434 aa12.07□□□□□ -0.48
PRPF8-201ENST00000304992 ATF7IPQ6VMQ6 1270 aa12.07□□□□□ -0.48
PRPF8-201ENST00000304992 GPS2Q13227 327 aa12.07□□□□□ -0.48
PRPF8-201ENST00000304992 ZSCAN25Q6NSZ9 544 aa12.07□□□□□ -0.48
PRPF8-201ENST00000304992 ZNF652Q9Y2D9 606 aa12.07□□□□□ -0.48
PRPF8-201ENST00000304992 ANKRD30BQ9BXX2 1392 aa12.07□□□□□ -0.48
PRPF8-201ENST00000304992 SMC2O95347 1197 aa12.07□□□□□ -0.48
PRPF8-201ENST00000304992 SSBP05455 408 aaKnown RBP eCLIP12.07□□□□□ -0.48
PRPF8-201ENST00000304992 TMOD2Q9NZR1 351 aa12.07□□□□□ -0.48
PRPF8-201ENST00000304992 MYD88Q99836 296 aa12.06□□□□□ -0.48
PRPF8-201ENST00000304992 PHF8Q9UPP1 1060 aa12.06□□□□□ -0.48
PRPF8-201ENST00000304992 EFCAB5A4FU69 1503 aa12.06□□□□□ -0.48
PRPF8-201ENST00000304992 EPRSP07814 1512 aaKnown RBP12.06□□□□□ -0.48
PRPF8-201ENST00000304992 UBAC1Q9BSL1 405 aa12.06□□□□□ -0.48
PRPF8-201ENST00000304992 NUTM1Q86Y26 1132 aa12.06□□□□□ -0.48
PRPF8-201ENST00000304992 MAGEC2Q9UBF1 373 aaPredicted RBP12.06□□□□□ -0.48
PRPF8-201ENST00000304992 DUSP27Q5VZP5 1158 aa12.05□□□□□ -0.48
PRPF8-201ENST00000304992 NFE2L2Q16236 605 aa12.05□□□□□ -0.48
PRPF8-201ENST00000304992 SUPT6HQ7KZ85 1726 aaKnown RBP12.05□□□□□ -0.48
PRPF8-201ENST00000304992 TTLL12Q14166 644 aaPredicted RBP12.05□□□□□ -0.48
PRPF8-201ENST00000304992 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
PRPF8-201ENST00000304992 SYCP1Q15431 976 aa12.05□□□□□ -0.48
PRPF8-201ENST00000304992 CAVIN1Q6NZI2 390 aaKnown RBP12.05□□□□□ -0.48
PRPF8-201ENST00000304992 EXOC6BQ9Y2D4 811 aa12.05□□□□□ -0.48
PRPF8-201ENST00000304992 FCHSD2O94868 740 aa12.05□□□□□ -0.48
PRPF8-201ENST00000304992 ZNF76P36508 570 aa12.05□□□□□ -0.48
PRPF8-201ENST00000304992 CAGE1Q8TC20 777 aa12.05□□□□□ -0.48
PRPF8-201ENST00000304992 PRPF40AO75400 957 aaKnown RBP12.05□□□□□ -0.48
PRPF8-201ENST00000304992 PDCP20941 246 aa12.04□□□□□ -0.48
PRPF8-201ENST00000304992 GPTP24298 496 aa12.04□□□□□ -0.48
PRPF8-201ENST00000304992 SKIDA1Q1XH10 827 aa12.04□□□□□ -0.48
PRPF8-201ENST00000304992 AIDAQ96BJ3 306 aa12.04□□□□□ -0.48
PRPF8-201ENST00000304992 PDCL3Q9H2J4 239 aa12.04□□□□□ -0.48
PRPF8-201ENST00000304992 TMPOP42166 694 aaKnown RBP12.04□□□□□ -0.48
PRPF8-201ENST00000304992 WDR63Q8IWG1 891 aa12.04□□□□□ -0.48
PRPF8-201ENST00000304992 ZNF396Q96N95 335 aaPredicted RBP12.04□□□□□ -0.48
PRPF8-201ENST00000304992 TRIM5Q9C035 493 aa12.04□□□□□ -0.48
PRPF8-201ENST00000304992 RUFY1Q96T51 708 aa12.04□□□□□ -0.48
PRPF8-201ENST00000304992 MINDY4BA8MYZ0 360 aa12.03□□□□□ -0.48
PRPF8-201ENST00000304992 CRACR2BQ8N4Y2 399 aaPredicted RBP12.03□□□□□ -0.48
PRPF8-201ENST00000304992 MNS1Q8NEH6 495 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms