RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 PNNQ9H307 717 aaKnown RBP20.51■□□□□ 0.87
LONRF3-201ENST00000304778 FCHSD2O94868 740 aa20.5■□□□□ 0.87
LONRF3-201ENST00000304778 ACEP12821 1306 aa20.5■□□□□ 0.87
LONRF3-201ENST00000304778 RIPK4P57078 832 aa20.49■□□□□ 0.87
LONRF3-201ENST00000304778 TNNQ9UQP3 1299 aa20.49■□□□□ 0.87
LONRF3-201ENST00000304778 AATKQ6ZMQ8 1374 aa20.49■□□□□ 0.87
LONRF3-201ENST00000304778 BCL2L13Q9BXK5 485 aa20.49■□□□□ 0.87
LONRF3-201ENST00000304778 PCDHB15Q9Y5E8 787 aa20.49■□□□□ 0.87
LONRF3-201ENST00000304778 RRS1Q15050 365 aaKnown RBP20.48■□□□□ 0.87
LONRF3-201ENST00000304778 PLEKHG3A1L390 1219 aa20.48■□□□□ 0.87
LONRF3-201ENST00000304778 TSR2Q969E8 191 aaKnown RBP20.48■□□□□ 0.87
LONRF3-201ENST00000304778 PRKAR2BP31323 418 aa20.47■□□□□ 0.87
LONRF3-201ENST00000304778 LRRC7Q96NW7 1537 aa20.47■□□□□ 0.87
LONRF3-201ENST00000304778 TOPAZ1Q8N9V7 1692 aa20.47■□□□□ 0.87
LONRF3-201ENST00000304778 HMOX1P09601 288 aa20.46■□□□□ 0.87
LONRF3-201ENST00000304778 IL13P35225 146 aa20.46■□□□□ 0.87
LONRF3-201ENST00000304778 TTC21BQ7Z4L5 1316 aa20.46■□□□□ 0.87
LONRF3-201ENST00000304778 PTCH1Q13635 1447 aa20.45■□□□□ 0.86
LONRF3-201ENST00000304778 CDK12Q9NYV4 1490 aaPredicted RBP20.45■□□□□ 0.86
LONRF3-201ENST00000304778 SPRYD3Q8NCJ5 442 aa20.45■□□□□ 0.86
LONRF3-201ENST00000304778 CT47B1P0C2W7 299 aaPredicted RBP20.45■□□□□ 0.86
LONRF3-201ENST00000304778 NAP1L5Q96NT1 182 aaPredicted RBP20.44■□□□□ 0.86
LONRF3-201ENST00000304778 DIP2AQ14689 1571 aa20.44■□□□□ 0.86
LONRF3-201ENST00000304778 CEP170BQ9Y4F5 1589 aaPredicted RBP20.43■□□□□ 0.86
LONRF3-201ENST00000304778 MVPQ14764 893 aaKnown RBP20.43■□□□□ 0.86
LONRF3-201ENST00000304778 RWDD1Q9H446 243 aaPredicted RBP20.43■□□□□ 0.86
LONRF3-201ENST00000304778 RIMS1Q86UR5 1692 aaKnown RBP20.43■□□□□ 0.86
LONRF3-201ENST00000304778 NRKQ7Z2Y5 1582 aa20.43■□□□□ 0.86
LONRF3-201ENST00000304778 PHACTR3Q96KR7 559 aa20.43■□□□□ 0.86
LONRF3-201ENST00000304778 PDZRN3Q9UPQ7 1066 aa20.43■□□□□ 0.86
LONRF3-201ENST00000304778 USP6P35125 1406 aa20.42■□□□□ 0.86
LONRF3-201ENST00000304778 IL16Q14005 1332 aa20.42■□□□□ 0.86
LONRF3-201ENST00000304778 EXOSC9Q06265 439 aaKnown RBP20.42■□□□□ 0.86
LONRF3-201ENST00000304778 HSP90AA2PQ14568 343 aaPredicted RBP20.42■□□□□ 0.86
LONRF3-201ENST00000304778 ZKSCAN2Q63HK3 967 aa20.42■□□□□ 0.86
LONRF3-201ENST00000304778 BECN1Q14457 450 aa20.4■□□□□ 0.86
LONRF3-201ENST00000304778 KCNA6P17658 529 aa20.4■□□□□ 0.86
LONRF3-201ENST00000304778 FTSJ3Q8IY81 847 aaKnown RBP20.39■□□□□ 0.85
LONRF3-201ENST00000304778 DZIP1LQ8IYY4 767 aaKnown RBP20.39■□□□□ 0.85
LONRF3-201ENST00000304778 XRN1Q8IZH2 1706 aaKnown RBP20.39■□□□□ 0.85
LONRF3-201ENST00000304778 NFE2L2Q16236 605 aa20.38■□□□□ 0.85
LONRF3-201ENST00000304778 OVOS2A0A0J9YW53 1432 aa20.38■□□□□ 0.85
LONRF3-201ENST00000304778 OVOS2Q6IE36 1432 aa20.38■□□□□ 0.85
LONRF3-201ENST00000304778 UPF2Q9HAU5 1272 aaKnown RBP20.38■□□□□ 0.85
LONRF3-201ENST00000304778 SSH2Q76I76 1423 aa20.37■□□□□ 0.85
LONRF3-201ENST00000304778 L1TD1Q5T7N2 865 aaKnown RBP20.37■□□□□ 0.85
LONRF3-201ENST00000304778 HSP90AA1P07900 732 aaKnown RBP20.36■□□□□ 0.85
LONRF3-201ENST00000304778 TBC1D32Q96NH3 1257 aa20.36■□□□□ 0.85
LONRF3-201ENST00000304778 SMC4Q9NTJ3 1288 aa20.36■□□□□ 0.85
LONRF3-201ENST00000304778 NGDNQ8NEJ9 315 aaKnown RBP20.35■□□□□ 0.85
LONRF3-201ENST00000304778 RGPD8O14715 1765 aaPredicted RBP20.35■□□□□ 0.85
LONRF3-201ENST00000304778 GZF1Q9H116 711 aaPredicted RBP20.35■□□□□ 0.85
LONRF3-201ENST00000304778 RRP9O43818 475 aaKnown RBP20.34■□□□□ 0.85
LONRF3-201ENST00000304778 TRIM27P14373 513 aa20.34■□□□□ 0.85
LONRF3-201ENST00000304778 ANKLE2Q86XL3 938 aa20.34■□□□□ 0.85
LONRF3-201ENST00000304778 THUMPD2Q9BTF0 503 aaKnown RBP20.34■□□□□ 0.85
LONRF3-201ENST00000304778 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
LONRF3-201ENST00000304778 SOX12O15370 315 aa20.34■□□□□ 0.85
LONRF3-201ENST00000304778 EIF4A2Q14240 407 aaKnown RBP20.34■□□□□ 0.85
LONRF3-201ENST00000304778 SSH1Q8WYL5 1049 aa20.33■□□□□ 0.85
LONRF3-201ENST00000304778 USP31Q70CQ4 1352 aa20.32■□□□□ 0.84
LONRF3-201ENST00000304778 TTC21AQ8NDW8 1320 aa20.32■□□□□ 0.84
LONRF3-201ENST00000304778 DDX19BQ9UMR2 479 aa20.32■□□□□ 0.84
LONRF3-201ENST00000304778 HDAC1Q13547 482 aaPredicted RBP20.31■□□□□ 0.84
LONRF3-201ENST00000304778 ATF7IPQ6VMQ6 1270 aa20.31■□□□□ 0.84
LONRF3-201ENST00000304778 NALCNQ8IZF0 1738 aa20.31■□□□□ 0.84
LONRF3-201ENST00000304778 HSP90AB2PQ58FF8 381 aa20.31■□□□□ 0.84
LONRF3-201ENST00000304778 ADAMTSL3P82987 1691 aa20.3■□□□□ 0.84
LONRF3-201ENST00000304778 AEBP1Q8IUX7 1158 aa20.3■□□□□ 0.84
LONRF3-201ENST00000304778 PEAK1Q9H792 1746 aa20.29■□□□□ 0.84
LONRF3-201ENST00000304778 SULT6B1Q6IMI4 303 aa20.29■□□□□ 0.84
LONRF3-201ENST00000304778 ITPRIPQ8IWB1 547 aa20.29■□□□□ 0.84
LONRF3-201ENST00000304778 PANK2Q9BZ23 570 aa20.29■□□□□ 0.84
LONRF3-201ENST00000304778 ANTXR1Q9H6X2 564 aa20.28■□□□□ 0.84
LONRF3-201ENST00000304778 ANKARQ7Z5J8 1434 aa20.28■□□□□ 0.84
LONRF3-201ENST00000304778 CLCN1P35523 988 aa20.28■□□□□ 0.84
LONRF3-201ENST00000304778 ZNF142P52746 1687 aaPredicted RBP20.28■□□□□ 0.84
LONRF3-201ENST00000304778 CALD1Q05682 793 aaKnown RBP20.28■□□□□ 0.84
LONRF3-201ENST00000304778 KIF16BQ96L93 1317 aa20.27■□□□□ 0.84
LONRF3-201ENST00000304778 NOB1Q9ULX3 412 aaKnown RBP20.27■□□□□ 0.84
LONRF3-201ENST00000304778 XRCC6P12956 609 aaKnown RBP eCLIP20.27■□□□□ 0.83
LONRF3-201ENST00000304778 RBM33Q96EV2 1170 aaKnown RBP20.27■□□□□ 0.83
LONRF3-201ENST00000304778 TBC1D2Q9BYX2 928 aa20.27■□□□□ 0.83
LONRF3-201ENST00000304778 FAM83GA6ND36 823 aa20.26■□□□□ 0.83
LONRF3-201ENST00000304778 MAP3K19Q56UN5 1328 aa20.26■□□□□ 0.83
LONRF3-201ENST00000304778 LMOD3Q0VAK6 560 aa20.25■□□□□ 0.83
LONRF3-201ENST00000304778 IFT57Q9NWB7 429 aa20.25■□□□□ 0.83
LONRF3-201ENST00000304778 FMN2Q9NZ56 1722 aa20.25■□□□□ 0.83
LONRF3-201ENST00000304778 GNAI1P63096 354 aa20.25■□□□□ 0.83
LONRF3-201ENST00000304778 DLG5Q8TDM6 1919 aa20.25■□□□□ 0.83
LONRF3-201ENST00000304778 CHD2O14647 1828 aaKnown RBP20.25■□□□□ 0.83
LONRF3-201ENST00000304778 ZNF853P0CG23 659 aa20.25■□□□□ 0.83
LONRF3-201ENST00000304778 SMC5Q8IY18 1101 aa20.25■□□□□ 0.83
LONRF3-201ENST00000304778 DCTN1Q14203 1278 aa20.24■□□□□ 0.83
LONRF3-201ENST00000304778 TMEM57Q8N5G2 664 aa20.24■□□□□ 0.83
LONRF3-201ENST00000304778 MBIPQ9NS73 344 aa20.24■□□□□ 0.83
LONRF3-201ENST00000304778 PIK3C2AO00443 1686 aa20.24■□□□□ 0.83
LONRF3-201ENST00000304778 ALDH1L2Q3SY69 923 aa20.23■□□□□ 0.83
LONRF3-201ENST00000304778 IPO8O15397 1037 aaKnown RBP20.23■□□□□ 0.83
LONRF3-201ENST00000304778 NLRP6P59044 892 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms