RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 A0A1W2PP64 1363 aa18.31■□□□□ 0.52
RAB40A-201ENST00000304236 SPATA31A3Q5VYP0 1347 aa18.3■□□□□ 0.52
RAB40A-201ENST00000304236 ANKRD26Q9UPS8 1709 aa18.3■□□□□ 0.52
RAB40A-201ENST00000304236 RGS12O14924 1447 aa18.3■□□□□ 0.52
RAB40A-201ENST00000304236 DLC1Q96QB1 1528 aa18.3■□□□□ 0.52
RAB40A-201ENST00000304236 PSME1Q06323 249 aa18.3■□□□□ 0.52
RAB40A-201ENST00000304236 KIF1AQ12756 1690 aa18.3■□□□□ 0.52
RAB40A-201ENST00000304236 CANXP27824 592 aaKnown RBP18.29■□□□□ 0.52
RAB40A-201ENST00000304236 ADGRB2O60241 1585 aa18.29■□□□□ 0.52
RAB40A-201ENST00000304236 MYH16Q9H6N6 1097 aa18.28■□□□□ 0.52
RAB40A-201ENST00000304236 NEUROD2Q15784 382 aa18.28■□□□□ 0.52
RAB40A-201ENST00000304236 FAM161AQ3B820 660 aa18.28■□□□□ 0.52
RAB40A-201ENST00000304236 U2AF1L5P0DN76 240 aaPredicted RBP18.27■□□□□ 0.52
RAB40A-201ENST00000304236 U2AF1Q01081 240 aaKnown RBP eCLIP18.27■□□□□ 0.52
RAB40A-201ENST00000304236 RRP7AQ9Y3A4 280 aaKnown RBP18.27■□□□□ 0.52
RAB40A-201ENST00000304236 RARSP54136 660 aaKnown RBP18.26■□□□□ 0.51
RAB40A-201ENST00000304236 ATRNO75882 1429 aa18.26■□□□□ 0.51
RAB40A-201ENST00000304236 HDGFL2Q7Z4V5 671 aaPredicted RBP18.26■□□□□ 0.51
RAB40A-201ENST00000304236 CT47B1P0C2W7 299 aaPredicted RBP18.25■□□□□ 0.51
RAB40A-201ENST00000304236 MINK1Q8N4C8 1332 aaPredicted RBP18.24■□□□□ 0.51
RAB40A-201ENST00000304236 CLUAP1Q96AJ1 413 aa18.24■□□□□ 0.51
RAB40A-201ENST00000304236 ANKARQ7Z5J8 1434 aa18.24■□□□□ 0.51
RAB40A-201ENST00000304236 HAP1P54257 671 aaPredicted RBP18.24■□□□□ 0.51
RAB40A-201ENST00000304236 BCL9LQ86UU0 1499 aa18.24■□□□□ 0.51
RAB40A-201ENST00000304236 CD163L1Q9NR16 1453 aa18.23■□□□□ 0.51
RAB40A-201ENST00000304236 SKAP1Q86WV1 359 aa18.23■□□□□ 0.51
RAB40A-201ENST00000304236 PNNQ9H307 717 aaKnown RBP18.23■□□□□ 0.51
RAB40A-201ENST00000304236 TNS3Q68CZ2 1445 aa18.23■□□□□ 0.51
RAB40A-201ENST00000304236 SBNO1A3KN83 1393 aa18.23■□□□□ 0.51
RAB40A-201ENST00000304236 COL3A1P02461 1466 aaPredicted RBP18.23■□□□□ 0.51
RAB40A-201ENST00000304236 FYB1O15117 783 aa18.22■□□□□ 0.51
RAB40A-201ENST00000304236 PMFBP1Q8TBY8 1022 aa18.22■□□□□ 0.51
RAB40A-201ENST00000304236 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
RAB40A-201ENST00000304236 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
RAB40A-201ENST00000304236 LMOD2Q6P5Q4 547 aa18.21■□□□□ 0.51
RAB40A-201ENST00000304236 RGPD8O14715 1765 aaPredicted RBP18.21■□□□□ 0.51
RAB40A-201ENST00000304236 RTL5Q5HYW3 569 aaPredicted RBP18.21■□□□□ 0.5
RAB40A-201ENST00000304236 UNC5CLQ8IV45 518 aa18.21■□□□□ 0.5
RAB40A-201ENST00000304236 PANK1Q8TE04 598 aa18.21■□□□□ 0.5
RAB40A-201ENST00000304236 GJD4Q96KN9 370 aaPredicted RBP18.21■□□□□ 0.5
RAB40A-201ENST00000304236 COG6Q9Y2V7 657 aa18.21■□□□□ 0.5
RAB40A-201ENST00000304236 ARHGEF10O15013 1369 aa18.2■□□□□ 0.5
RAB40A-201ENST00000304236 MARF1Q9Y4F3 1742 aaKnown RBP18.2■□□□□ 0.5
RAB40A-201ENST00000304236 C8orf34Q49A92 452 aa18.2■□□□□ 0.5
RAB40A-201ENST00000304236 KIF20BQ96Q89 1820 aa18.2■□□□□ 0.5
RAB40A-201ENST00000304236 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
RAB40A-201ENST00000304236 WASLO00401 505 aaPredicted RBP18.19■□□□□ 0.5
RAB40A-201ENST00000304236 NBR1Q14596 966 aa18.19■□□□□ 0.5
RAB40A-201ENST00000304236 FRAT1Q92837 279 aaPredicted RBP18.19■□□□□ 0.5
RAB40A-201ENST00000304236 PLEKHF1Q96S99 279 aa18.19■□□□□ 0.5
RAB40A-201ENST00000304236 IL16Q14005 1332 aa18.19■□□□□ 0.5
RAB40A-201ENST00000304236 PPM1GO15355 546 aaPredicted RBP18.18■□□□□ 0.5
RAB40A-201ENST00000304236 IGHDP01880 384 aa18.18■□□□□ 0.5
RAB40A-201ENST00000304236 RGS3P49796 1198 aa18.18■□□□□ 0.5
RAB40A-201ENST00000304236 CABLES1Q8TDN4 633 aa18.18■□□□□ 0.5
RAB40A-201ENST00000304236 ATP7BP35670 1465 aa18.18■□□□□ 0.5
RAB40A-201ENST00000304236 SLIT2O94813 1529 aa18.17■□□□□ 0.5
RAB40A-201ENST00000304236 U2SURPO15042 1029 aaKnown RBP18.17■□□□□ 0.5
RAB40A-201ENST00000304236 PLEKHG5O94827 1062 aa18.17■□□□□ 0.5
RAB40A-201ENST00000304236 TMPOP42166 694 aaKnown RBP18.17■□□□□ 0.5
RAB40A-201ENST00000304236 DIAPH1O60610 1272 aaKnown RBP18.17■□□□□ 0.5
RAB40A-201ENST00000304236 PRR36Q9H6K5 1346 aa18.16■□□□□ 0.5
RAB40A-201ENST00000304236 CABP1Q9NZU7 370 aa18.15■□□□□ 0.5
RAB40A-201ENST00000304236 VIRMAQ69YN4 1812 aaKnown RBP18.15■□□□□ 0.5
RAB40A-201ENST00000304236 USP35Q9P2H5 1018 aa18.15■□□□□ 0.5
RAB40A-201ENST00000304236 ZKSCAN2Q63HK3 967 aa18.14■□□□□ 0.49
RAB40A-201ENST00000304236 NGDNQ8NEJ9 315 aaKnown RBP18.14■□□□□ 0.49
RAB40A-201ENST00000304236 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.14■□□□□ 0.49
RAB40A-201ENST00000304236 DEKP35659 375 aaKnown RBP18.13■□□□□ 0.49
RAB40A-201ENST00000304236 TRIM35Q9UPQ4 493 aa18.12■□□□□ 0.49
RAB40A-201ENST00000304236 FCHSD2O94868 740 aa18.11■□□□□ 0.49
RAB40A-201ENST00000304236 VPS72Q15906 364 aa18.11■□□□□ 0.49
RAB40A-201ENST00000304236 RWDD1Q9H446 243 aaPredicted RBP18.11■□□□□ 0.49
RAB40A-201ENST00000304236 DAXXQ9UER7 740 aaPredicted RBP18.11■□□□□ 0.49
RAB40A-201ENST00000304236 NUDT16Q96DE0 195 aaKnown RBP18.11■□□□□ 0.49
RAB40A-201ENST00000304236 FAM83GA6ND36 823 aa18.1■□□□□ 0.49
RAB40A-201ENST00000304236 RLBP1P12271 317 aa18.1■□□□□ 0.49
RAB40A-201ENST00000304236 MVPQ14764 893 aaKnown RBP18.1■□□□□ 0.49
RAB40A-201ENST00000304236 CCDC125Q86Z20 511 aa18.1■□□□□ 0.49
RAB40A-201ENST00000304236 CCDC9Q9Y3X0 531 aaKnown RBP18.1■□□□□ 0.49
RAB40A-201ENST00000304236 RIPK4P57078 832 aa18.1■□□□□ 0.49
RAB40A-201ENST00000304236 DZIP1LQ8IYY4 767 aaKnown RBP18.1■□□□□ 0.49
RAB40A-201ENST00000304236 NEFMP07197 916 aa18.09■□□□□ 0.49
RAB40A-201ENST00000304236 EXOSC9Q06265 439 aaKnown RBP18.08■□□□□ 0.49
RAB40A-201ENST00000304236 FTSJ3Q8IY81 847 aaKnown RBP18.08■□□□□ 0.49
RAB40A-201ENST00000304236 BCL2L13Q9BXK5 485 aa18.08■□□□□ 0.49
RAB40A-201ENST00000304236 GLI3P10071 1580 aa18.08■□□□□ 0.49
RAB40A-201ENST00000304236 TRPM3Q9HCF6 1732 aaPredicted RBP18.08■□□□□ 0.48
RAB40A-201ENST00000304236 EDC4Q6P2E9 1401 aaKnown RBP18.08■□□□□ 0.48
RAB40A-201ENST00000304236 PCDHB15Q9Y5E8 787 aa18.08■□□□□ 0.48
RAB40A-201ENST00000304236 TSR2Q969E8 191 aaKnown RBP18.07■□□□□ 0.48
RAB40A-201ENST00000304236 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
RAB40A-201ENST00000304236 ABCA3Q99758 1704 aa18.07■□□□□ 0.48
RAB40A-201ENST00000304236 SEPT12Q8IYM1 358 aa18.06■□□□□ 0.48
RAB40A-201ENST00000304236 CPSF1Q10570 1443 aaKnown RBP18.06■□□□□ 0.48
RAB40A-201ENST00000304236 NWD2Q9ULI1 1742 aa18.06■□□□□ 0.48
RAB40A-201ENST00000304236 POLKQ9UBT6 870 aa18.06■□□□□ 0.48
RAB40A-201ENST00000304236 TNNQ9UQP3 1299 aa18.06■□□□□ 0.48
RAB40A-201ENST00000304236 LAS1LQ9Y4W2 734 aaKnown RBP18.06■□□□□ 0.48
RAB40A-201ENST00000304236 ALS2Q96Q42 1657 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms