RNA–Protein interactions for RNA: ENST00000302763.11

CTNNA1-201, Transcript of catenin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNA1, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-201ENST00000302763 ZNF692Q9BU19 519 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-201ENST00000302763 LAS1LQ9Y4W2 734 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-201ENST00000302763 ERICH6BQ5W0A0 696 aa9.81□□□□□ -0.84
CTNNA1-201ENST00000302763 TTC21AQ8NDW8 1320 aa9.81□□□□□ -0.84
CTNNA1-201ENST00000302763 SCN11AQ9UI33 1791 aa9.81□□□□□ -0.84
CTNNA1-201ENST00000302763 USP19O94966 1318 aa9.81□□□□□ -0.84
CTNNA1-201ENST00000302763 PPP4R2Q9NY27 417 aa9.81□□□□□ -0.84
CTNNA1-201ENST00000302763 RUNDC1Q96C34 613 aa9.8□□□□□ -0.84
CTNNA1-201ENST00000302763 KIF24Q5T7B8 1368 aa9.8□□□□□ -0.84
CTNNA1-201ENST00000302763 PAPPAQ13219 1627 aa9.8□□□□□ -0.84
CTNNA1-201ENST00000302763 RRP1P56182 461 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-201ENST00000302763 HDGFL2Q7Z4V5 671 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-201ENST00000302763 PHACTR3Q96KR7 559 aa9.8□□□□□ -0.84
CTNNA1-201ENST00000302763 COL16A1Q07092 1604 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-201ENST00000302763 TCP11L2Q8N4U5 519 aa9.79□□□□□ -0.84
CTNNA1-201ENST00000302763 CRB1P82279 1406 aa9.79□□□□□ -0.84
CTNNA1-201ENST00000302763 TUBGCP6Q96RT7 1819 aa9.79□□□□□ -0.84
CTNNA1-201ENST00000302763 C20orf194Q5TEA3 1177 aa9.79□□□□□ -0.84
CTNNA1-201ENST00000302763 PLEKHG5O94827 1062 aa9.78□□□□□ -0.84
CTNNA1-201ENST00000302763 ZNF853P0CG23 659 aa9.78□□□□□ -0.84
CTNNA1-201ENST00000302763 RGS3P49796 1198 aa9.78□□□□□ -0.84
CTNNA1-201ENST00000302763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.78□□□□□ -0.846e-7■■■□□ 16.3
CTNNA1-201ENST00000302763 NGEFQ8N5V2 710 aa9.78□□□□□ -0.84
CTNNA1-201ENST00000302763 SBNO1A3KN83 1393 aa9.78□□□□□ -0.84
CTNNA1-201ENST00000302763 RTN4Q9NQC3 1192 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-201ENST00000302763 ARHGEF10O15013 1369 aa9.78□□□□□ -0.84
CTNNA1-201ENST00000302763 UBR2Q8IWV8 1755 aa9.78□□□□□ -0.84
CTNNA1-201ENST00000302763 MSH6P52701 1360 aa9.77□□□□□ -0.84
CTNNA1-201ENST00000302763 RBM33Q96EV2 1170 aaKnown RBP9.77□□□□□ -0.84
CTNNA1-201ENST00000302763 MAP3K19Q56UN5 1328 aa9.77□□□□□ -0.84
CTNNA1-201ENST00000302763 PLCH1Q4KWH8 1693 aa9.77□□□□□ -0.85
CTNNA1-201ENST00000302763 EIF4A2Q14240 407 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-201ENST00000302763 RRS1Q15050 365 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-201ENST00000302763 C5P01031 1676 aa9.77□□□□□ -0.85
CTNNA1-201ENST00000302763 EIF5BO60841 1220 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-201ENST00000302763 WDR63Q8IWG1 891 aa9.77□□□□□ -0.85
CTNNA1-201ENST00000302763 RGS12O14924 1447 aa9.77□□□□□ -0.85
CTNNA1-201ENST00000302763 IGSF1Q8N6C5 1336 aa9.77□□□□□ -0.85
CTNNA1-201ENST00000302763 RTL1A6NKG5 1358 aa9.77□□□□□ -0.85
CTNNA1-201ENST00000302763 RCAN3Q9UKA8 241 aa9.76□□□□□ -0.85
CTNNA1-201ENST00000302763 TOGARAM1Q9Y4F4 1720 aa9.76□□□□□ -0.85
CTNNA1-201ENST00000302763 KDM2BQ8NHM5 1336 aa9.76□□□□□ -0.85
CTNNA1-201ENST00000302763 TMPOP42166 694 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-201ENST00000302763 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-201ENST00000302763 NRAPQ86VF7 1730 aa9.75□□□□□ -0.85
CTNNA1-201ENST00000302763 TMEM94Q12767 1356 aa9.75□□□□□ -0.85
CTNNA1-201ENST00000302763 GOLGA2Q08379 1002 aa9.75□□□□□ -0.85
CTNNA1-201ENST00000302763 CACNA1FO60840 1977 aa9.75□□□□□ -0.85
CTNNA1-201ENST00000302763 FCHSD2O94868 740 aa9.75□□□□□ -0.85
CTNNA1-201ENST00000302763 PMFBP1Q8TBY8 1022 aa9.75□□□□□ -0.85
CTNNA1-201ENST00000302763 IL16Q14005 1332 aa9.74□□□□□ -0.85
CTNNA1-201ENST00000302763 AHDC1Q5TGY3 1603 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-201ENST00000302763 PPM1GO15355 546 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-201ENST00000302763 FLT4P35916 1363 aa9.74□□□□□ -0.85
CTNNA1-201ENST00000302763 NEFMP07197 916 aa9.73□□□□□ -0.85
CTNNA1-201ENST00000302763 HSP90AB2PQ58FF8 381 aa9.73□□□□□ -0.85
CTNNA1-201ENST00000302763 ORAI2Q96SN7 254 aa9.73□□□□□ -0.85
CTNNA1-201ENST00000302763 ROBO1Q9Y6N7 1651 aa9.73□□□□□ -0.85
CTNNA1-201ENST00000302763 DIAPH1O60610 1272 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-201ENST00000302763 AEBP1Q8IUX7 1158 aa9.73□□□□□ -0.85
CTNNA1-201ENST00000302763 FRAT1Q92837 279 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-201ENST00000302763 MRC1P22897 1456 aa9.73□□□□□ -0.85
CTNNA1-201ENST00000302763 FANCIQ9NVI1 1328 aa9.73□□□□□ -0.85
CTNNA1-201ENST00000302763 E9PSI1 815 aa9.73□□□□□ -0.85
CTNNA1-201ENST00000302763 RRP7AQ9Y3A4 280 aaKnown RBP9.72□□□□□ -0.85
CTNNA1-201ENST00000302763 NUTM2FA1L443 756 aa9.72□□□□□ -0.85
CTNNA1-201ENST00000302763 PLIN1O60240 522 aa9.71□□□□□ -0.85
CTNNA1-201ENST00000302763 BCAR3O75815 825 aa9.71□□□□□ -0.85
CTNNA1-201ENST00000302763 RARSP54136 660 aaKnown RBP9.71□□□□□ -0.85
CTNNA1-201ENST00000302763 BRPF1P55201 1214 aaPredicted RBP9.71□□□□□ -0.85
CTNNA1-201ENST00000302763 HOXC9P31274 260 aa9.71□□□□□ -0.86
CTNNA1-201ENST00000302763 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-201ENST00000302763 EXOC6Q8TAG9 804 aa9.71□□□□□ -0.86
CTNNA1-201ENST00000302763 COG3Q96JB2 828 aa9.71□□□□□ -0.86
CTNNA1-201ENST00000302763 NOP58Q9Y2X3 529 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-201ENST00000302763 HSPA2P54652 639 aa9.7□□□□□ -0.86
CTNNA1-201ENST00000302763 PHF8Q9UPP1 1060 aa9.7□□□□□ -0.86
CTNNA1-201ENST00000302763 TNNQ9UQP3 1299 aa9.7□□□□□ -0.86
CTNNA1-201ENST00000302763 CEMIPQ8WUJ3 1361 aa9.7□□□□□ -0.86
CTNNA1-201ENST00000302763 LAMB4A4D0S4 1761 aa9.69□□□□□ -0.86
CTNNA1-201ENST00000302763 HSP90AA1P07900 732 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-201ENST00000302763 RLBP1P12271 317 aa9.69□□□□□ -0.86
CTNNA1-201ENST00000302763 PRKAR2BP31323 418 aa9.69□□□□□ -0.86
CTNNA1-201ENST00000302763 TNS3Q68CZ2 1445 aa9.69□□□□□ -0.86
CTNNA1-201ENST00000302763 U2AF1L5P0DN76 240 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-201ENST00000302763 U2AF1Q01081 240 aaKnown RBP eCLIP9.69□□□□□ -0.86
CTNNA1-201ENST00000302763 NFE2L2Q16236 605 aa9.68□□□□□ -0.86
CTNNA1-201ENST00000302763 EYA1Q99502 592 aa9.68□□□□□ -0.86
CTNNA1-201ENST00000302763 C19orf44Q9H6X5 657 aa9.68□□□□□ -0.86
CTNNA1-201ENST00000302763 AXIN2Q9Y2T1 843 aa9.68□□□□□ -0.86
CTNNA1-201ENST00000302763 CFAP53Q96M91 514 aa9.67□□□□□ -0.86
CTNNA1-201ENST00000302763 OVOS2A0A0G2JMS6 1433 aa9.67□□□□□ -0.86
CTNNA1-201ENST00000302763 ARHGEF25Q86VW2 580 aa9.67□□□□□ -0.86
CTNNA1-201ENST00000302763 CPDO75976 1380 aa9.67□□□□□ -0.86
CTNNA1-201ENST00000302763 UPF2Q9HAU5 1272 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-201ENST00000302763 NUP188Q5SRE5 1749 aa9.67□□□□□ -0.86
CTNNA1-201ENST00000302763 CICQ96RK0 1608 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-201ENST00000302763 PHLPP1O60346 1717 aa9.66□□□□□ -0.86
CTNNA1-201ENST00000302763 TSR2Q969E8 191 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-201ENST00000302763 ZNF335Q9H4Z2 1342 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms